RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 PPP2R5EQ16537 467 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 Q3C1V9 767 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 GLE1Q53GS7 698 aaKnown RBP7.46□□□□□ -1.22
USP39-219ENST00000496047 CELF3Q5SZQ8 465 aaKnown RBP7.46□□□□□ -1.22
USP39-219ENST00000496047 C8orf74Q6P047 294 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 WDR93Q6P2C0 686 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 ZPBP2Q6X784 338 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 HDXQ7Z353 690 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 ZNF571Q7Z3V5 609 aaPredicted RBP7.46□□□□□ -1.22
USP39-219ENST00000496047 PEX26Q7Z412 305 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 IRF2BP2Q7Z5L9 587 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 ANKRD23Q86SG2 305 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 ZNF677Q86XU0 584 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 ABRAQ8N0Z2 381 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 PPM1KQ8N3J5 372 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 MORC4Q8TE76 937 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 PARD3BQ8TEW8 1205 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 ATP8B4Q8TF62 1192 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 HNRNPLLQ8WVV9 542 aaKnown RBP7.46□□□□□ -1.22
USP39-219ENST00000496047 ATRIPQ8WXE1 791 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 SAAL1Q96ER3 474 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 CLMNQ96JQ2 1002 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 SPATA33Q96N06 139 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 CEP89Q96ST8 783 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 AGPAT1Q99943 283 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 SH2D3AQ9BRG2 576 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 MSTO1Q9BUK6 570 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 PLVAPQ9BX97 442 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 PARD6BQ9BYG5 372 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 UBE2TQ9NPD8 197 aaPredicted RBP7.46□□□□□ -1.22
USP39-219ENST00000496047 XPNPEP1Q9NQW7 623 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 PDLIM7Q9NR12 457 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 AMFRQ9UKV5 643 aa7.46□□□□□ -1.22
USP39-219ENST00000496047 CCL15-CCL14A0A0B4J2E2 113 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 GOLGA6L10A0A0M3HER8 536 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 LRRIQ3A6PVS8 624 aaPredicted RBP7.45□□□□□ -1.22
USP39-219ENST00000496047 FANCGO15287 622 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 MAGEB2O15479 319 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 ADCY3O60266 1144 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 LRRN2O75325 713 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 MAFO75444 373 aaPredicted RBP7.45□□□□□ -1.22
USP39-219ENST00000496047 LGR5O75473 907 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 CNMDO75829 334 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 GH1P01241 217 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 ADRB2P07550 413 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 RHOXF2BP0C7M4 288 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 ZBTB48P10074 688 aaPredicted RBP7.45□□□□□ -1.22
USP39-219ENST00000496047 DLATP10515 647 aaKnown RBP7.45□□□□□ -1.22
USP39-219ENST00000496047 HSPA8P11142 646 aaKnown RBP7.45□□□□□ -1.22
USP39-219ENST00000496047 NDUFV2P19404 249 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 TMOD1P28289 359 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 GPC3P51654 580 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 GCNT1Q02742 428 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 MAP2K1Q02750 393 aaPredicted RBP7.45□□□□□ -1.22
USP39-219ENST00000496047 TNFAIP2Q03169 654 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 GRM1Q13255 1194 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 NAA30Q147X3 362 aaPredicted RBP7.45□□□□□ -1.22
USP39-219ENST00000496047 PSMD6Q15008 389 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 MAPK6Q16659 721 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 CCL15Q16663 113 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 KYAT1Q16773 422 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 HSP90B2PQ58FF3 399 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 ZNF484Q5JVG2 852 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 LDLRAD1Q5T700 205 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 CC2D1AQ6P1N0 951 aaPredicted RBP7.45□□□□□ -1.22
USP39-219ENST00000496047 EEPD1Q7L9B9 569 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 ZNF572Q7Z3I7 529 aaPredicted RBP7.45□□□□□ -1.22
USP39-219ENST00000496047 DAAM2Q86T65 1068 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 CBWD2Q8IUF1 395 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 MMGT1Q8N4V1 131 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 CCDC127Q96BQ5 260 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 MFSD14AQ96MC6 490 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 FBXL18Q96ME1 805 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 CGRRF1Q99675 332 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 ARID3AQ99856 593 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 RHOXF2Q9BQY4 288 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 FAM213AQ9BRX8 229 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 KIFC3Q9BVG8 833 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 TMEM117Q9H0C3 514 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 GBA2Q9HCG7 927 aaPredicted RBP7.45□□□□□ -1.22
USP39-219ENST00000496047 RAB20Q9NX57 234 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 RBAKQ9NYW8 714 aaPredicted RBP7.45□□□□□ -1.22
USP39-219ENST00000496047 ERAP1Q9NZ08 941 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 ANKFY1Q9P2R3 1169 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 DDX41Q9UJV9 622 aaKnown RBP7.45□□□□□ -1.22
USP39-219ENST00000496047 RAB21Q9UL25 225 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 COQ4Q9Y3A0 265 aa7.45□□□□□ -1.22
USP39-219ENST00000496047 TNRC18O15417 2968 aaPredicted RBP7.45□□□□□ -1.22
USP39-219ENST00000496047 DNAJC25-GNG10A0A024R161 153 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 GSTTP1A0A1W2PQM5 241 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 MIF4GDA9UHW6 222 aaKnown RBP7.44□□□□□ -1.22
USP39-219ENST00000496047 ANKRD63C9JTQ0 380 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 CCDC188H7C350 402 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 PGRMC1O00264 195 aaKnown RBP7.44□□□□□ -1.22
USP39-219ENST00000496047 PDHXO00330 501 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 CLDN3O15551 220 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 LILRB3O75022 631 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 RTN2O75298 545 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 STBD1O95210 358 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 KIF4AO95239 1232 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms