RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 FAM83GA6ND36 823 aa5.74□□□□□ -1.49
VPS50-219ENST00000495039 PHF2O75151 1096 aa5.74□□□□□ -1.49
VPS50-219ENST00000495039 CANXP27824 592 aaKnown RBP5.74□□□□□ -1.49
VPS50-219ENST00000495039 ABCG1P45844 678 aa5.74□□□□□ -1.49
VPS50-219ENST00000495039 LSSP48449 732 aa5.74□□□□□ -1.49
VPS50-219ENST00000495039 SCNN1BP51168 640 aa5.74□□□□□ -1.49
VPS50-219ENST00000495039 OCA2Q04671 838 aa5.74□□□□□ -1.49
VPS50-219ENST00000495039 MED25Q71SY5 747 aa5.74□□□□□ -1.49
VPS50-219ENST00000495039 C11orf74Q86VG3 221 aa5.74□□□□□ -1.49
VPS50-219ENST00000495039 LRRTM3Q86VH5 581 aa5.74□□□□□ -1.49
VPS50-219ENST00000495039 DRC7Q8IY82 874 aa5.74□□□□□ -1.49
VPS50-219ENST00000495039 FAM43AQ8N2R8 423 aa5.74□□□□□ -1.49
VPS50-219ENST00000495039 ACTRT2Q8TDY3 377 aa5.74□□□□□ -1.49
VPS50-219ENST00000495039 MRFAP1L1Q96HT8 127 aa5.74□□□□□ -1.49
VPS50-219ENST00000495039 BOD1Q96IK1 185 aa5.74□□□□□ -1.49
VPS50-219ENST00000495039 SLC29A3Q9BZD2 475 aa5.74□□□□□ -1.49
VPS50-219ENST00000495039 KANSL2Q9H9L4 492 aa5.74□□□□□ -1.49
VPS50-219ENST00000495039 KMT5AQ9NQR1 393 aa5.74□□□□□ -1.49
VPS50-219ENST00000495039 TMEM74BQ9NUR3 256 aa5.74□□□□□ -1.49
VPS50-219ENST00000495039 SLC17A6Q9P2U8 582 aa5.74□□□□□ -1.49
VPS50-219ENST00000495039 RPTORQ8N122 1335 aa5.74□□□□□ -1.49
VPS50-219ENST00000495039 A0A1B0GTW7 788 aa5.73□□□□□ -1.49
VPS50-219ENST00000495039 LRRC3CA6NJW4 275 aa5.73□□□□□ -1.49
VPS50-219ENST00000495039 ADCY6O43306 1168 aa5.73□□□□□ -1.49
VPS50-219ENST00000495039 PTPN7P35236 360 aa5.73□□□□□ -1.49
VPS50-219ENST00000495039 CXADRP78310 365 aa5.73□□□□□ -1.49
VPS50-219ENST00000495039 TCEA2Q15560 299 aa5.73□□□□□ -1.49
VPS50-219ENST00000495039 MST1LQ2TV78 715 aa5.73□□□□□ -1.49
VPS50-219ENST00000495039 PITRM1Q5JRX3 1037 aa5.73□□□□□ -1.49
VPS50-219ENST00000495039 RRP12Q5JTH9 1297 aaKnown RBP5.73□□□□□ -1.49
VPS50-219ENST00000495039 PDLIM2Q96JY6 352 aa5.73□□□□□ -1.49
VPS50-219ENST00000495039 HEPHQ9BQS7 1158 aa5.73□□□□□ -1.49
VPS50-219ENST00000495039 ZSWIM1Q9BR11 485 aa5.73□□□□□ -1.49
VPS50-219ENST00000495039 KCTD10Q9H3F6 313 aa5.73□□□□□ -1.49
VPS50-219ENST00000495039 PRDM12Q9H4Q4 367 aa5.73□□□□□ -1.49
VPS50-219ENST00000495039 COL3A1P02461 1466 aaPredicted RBP5.72□□□□□ -1.49
VPS50-219ENST00000495039 LGALS4P56470 323 aa5.72□□□□□ -1.49
VPS50-219ENST00000495039 IL2P60568 153 aa5.72□□□□□ -1.49
VPS50-219ENST00000495039 RAP2BP61225 183 aa5.72□□□□□ -1.49
VPS50-219ENST00000495039 ZNF572Q7Z3I7 529 aaPredicted RBP5.72□□□□□ -1.49
VPS50-219ENST00000495039 KLK15Q9H2R5 256 aa5.72□□□□□ -1.49
VPS50-219ENST00000495039 KCNE5Q9UJ90 142 aa5.72□□□□□ -1.49
VPS50-219ENST00000495039 DMTF1Q9Y222 760 aa5.72□□□□□ -1.49
VPS50-219ENST00000495039 LPLP06858 475 aa5.71□□□□□ -1.5
VPS50-219ENST00000495039 FGFR4P22455 802 aa5.71□□□□□ -1.5
VPS50-219ENST00000495039 CTGFP29279 349 aa5.71□□□□□ -1.5
VPS50-219ENST00000495039 CNNM4Q6P4Q7 775 aa5.71□□□□□ -1.5
VPS50-219ENST00000495039 THNSL2Q86YJ6 484 aa5.71□□□□□ -1.5
VPS50-219ENST00000495039 TRMT2AQ8IZ69 625 aaKnown RBP5.71□□□□□ -1.5
VPS50-219ENST00000495039 PPM1KQ8N3J5 372 aa5.71□□□□□ -1.5
VPS50-219ENST00000495039 REPS2Q8NFH8 660 aa5.71□□□□□ -1.5
VPS50-219ENST00000495039 OR2W6PQ8NHA6 318 aa5.71□□□□□ -1.5
VPS50-219ENST00000495039 DNAJC2Q99543 621 aaKnown RBP5.71□□□□□ -1.5
VPS50-219ENST00000495039 AIFM2Q9BRQ8 373 aa5.71□□□□□ -1.5
VPS50-219ENST00000495039 CD2APQ9Y5K6 639 aa5.71□□□□□ -1.5
VPS50-219ENST00000495039 POLR2AP24928 1970 aaKnown RBP5.7□□□□□ -1.5
VPS50-219ENST00000495039 SP140Q13342 867 aa5.7□□□□□ -1.5
VPS50-219ENST00000495039 PCBP1Q15365 356 aaKnown RBP eCLIP5.7□□□□□ -1.5
VPS50-219ENST00000495039 BROXQ5VW32 411 aa5.7□□□□□ -1.5
VPS50-219ENST00000495039 C1QL2Q7Z5L3 287 aa5.7□□□□□ -1.5
VPS50-219ENST00000495039 C1QTNF7Q9BXJ2 289 aa5.7□□□□□ -1.5
VPS50-219ENST00000495039 NOC2LQ9Y3T9 749 aaKnown RBP5.7□□□□□ -1.5
VPS50-219ENST00000495039 PNPLA7Q6ZV29 1317 aa5.7□□□□□ -1.5
VPS50-219ENST00000495039 AKR1B10O60218 316 aa5.69□□□□□ -1.5
VPS50-219ENST00000495039 FKBP9O95302 570 aa5.69□□□□□ -1.5
VPS50-219ENST00000495039 GPANK1O95872 356 aa5.69□□□□□ -1.5
VPS50-219ENST00000495039 ALOX15P16050 662 aaPredicted RBP5.69□□□□□ -1.5
VPS50-219ENST00000495039 GCSHP23434 173 aa5.69□□□□□ -1.5
VPS50-219ENST00000495039 ADCYAP1R1P41586 468 aa5.69□□□□□ -1.5
VPS50-219ENST00000495039 HSD11B2P80365 405 aa5.69□□□□□ -1.5
VPS50-219ENST00000495039 SRSF4Q08170 494 aaKnown RBP5.69□□□□□ -1.5
VPS50-219ENST00000495039 SEPT7Q16181 437 aaKnown RBP5.69□□□□□ -1.5
VPS50-219ENST00000495039 GJC2Q5T442 439 aaPredicted RBP5.69□□□□□ -1.5
VPS50-219ENST00000495039 FOXR2Q6PJQ5 311 aa5.69□□□□□ -1.5
VPS50-219ENST00000495039 FKBP9P1Q75LS8 142 aa5.69□□□□□ -1.5
VPS50-219ENST00000495039 RASSF3Q86WH2 238 aa5.69□□□□□ -1.5
VPS50-219ENST00000495039 AHI1Q8N157 1196 aa5.69□□□□□ -1.5
VPS50-219ENST00000495039 SH2D3CQ8N5H7 860 aa5.69□□□□□ -1.5
VPS50-219ENST00000495039 OR7D4Q8NG98 312 aa5.69□□□□□ -1.5
VPS50-219ENST00000495039 PTCD3Q96EY7 689 aaKnown RBP5.69□□□□□ -1.5
VPS50-219ENST00000495039 BCO1Q9HAY6 547 aa5.69□□□□□ -1.5
VPS50-219ENST00000495039 KCTD5Q9NXV2 234 aa5.69□□□□□ -1.5
VPS50-219ENST00000495039 ATRNL1Q5VV63 1379 aa5.68□□□□□ -1.5
VPS50-219ENST00000495039 CGB1A6NKQ9 187 aa5.68□□□□□ -1.5
VPS50-219ENST00000495039 ZNF81P51508 661 aa5.68□□□□□ -1.5
VPS50-219ENST00000495039 C21orf62-AS1Q17RA5 79 aa5.68□□□□□ -1.5
VPS50-219ENST00000495039 CT83Q5H943 113 aa5.68□□□□□ -1.5
VPS50-219ENST00000495039 AKNAD1Q5T1N1 836 aa5.68□□□□□ -1.5
VPS50-219ENST00000495039 COLGALT2Q8IYK4 626 aa5.68□□□□□ -1.5
VPS50-219ENST00000495039 SLC5A5Q92911 643 aa5.68□□□□□ -1.5
VPS50-219ENST00000495039 NINJ1Q92982 152 aa5.68□□□□□ -1.5
VPS50-219ENST00000495039 UROC1Q96N76 676 aa5.68□□□□□ -1.5
VPS50-219ENST00000495039 MRI1Q9BV20 369 aa5.68□□□□□ -1.5
VPS50-219ENST00000495039 EMC7Q9NPA0 242 aa5.68□□□□□ -1.5
VPS50-219ENST00000495039 ASB6Q9NWX5 421 aa5.68□□□□□ -1.5
VPS50-219ENST00000495039 MOCS1Q9NZB8 636 aa5.68□□□□□ -1.5
VPS50-219ENST00000495039 ARPP21Q9UBL0 812 aaPredicted RBP5.68□□□□□ -1.5
VPS50-219ENST00000495039 POMCP01189 267 aa5.67□□□□□ -1.5
VPS50-219ENST00000495039 RAP2AP10114 183 aa5.67□□□□□ -1.5
VPS50-219ENST00000495039 ATP5JP18859 108 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms