RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 GLIS3Q8NEA6 775 aa13.95□□□□□ -0.18
CLIP2-209ENST00000493166 POMGNT1Q8WZA1 660 aa13.95□□□□□ -0.18
CLIP2-209ENST00000493166 CCDC47Q96A33 483 aaKnown RBP13.95□□□□□ -0.18
CLIP2-209ENST00000493166 IGSF21Q96ID5 467 aa13.95□□□□□ -0.18
CLIP2-209ENST00000493166 SNX27Q96L92 541 aa13.95□□□□□ -0.18
CLIP2-209ENST00000493166 CXCL16Q9H2A7 254 aa13.95□□□□□ -0.18
CLIP2-209ENST00000493166 IKZF4Q9H2S9 585 aa13.95□□□□□ -0.18
CLIP2-209ENST00000493166 NSUN3Q9H649 340 aaKnown RBP13.95□□□□□ -0.18
CLIP2-209ENST00000493166 SLC39A2Q9NP94 309 aa13.95□□□□□ -0.18
CLIP2-209ENST00000493166 PRG3Q9Y2Y8 225 aaPredicted RBP13.95□□□□□ -0.18
CLIP2-209ENST00000493166 UBE4BO95155 1302 aa13.94□□□□□ -0.18
CLIP2-209ENST00000493166 VWA8A3KMH1 1905 aa13.94□□□□□ -0.18
CLIP2-209ENST00000493166 KLRC4O43908 158 aa13.94□□□□□ -0.18
CLIP2-209ENST00000493166 RPN1P04843 607 aaKnown RBP13.94□□□□□ -0.18
CLIP2-209ENST00000493166 CLTAP09496 248 aa13.94□□□□□ -0.18
CLIP2-209ENST00000493166 CXCL8P10145 99 aa13.94□□□□□ -0.18
CLIP2-209ENST00000493166 TNFSF9P41273 254 aa13.94□□□□□ -0.18
CLIP2-209ENST00000493166 CAMK1Q14012 370 aa13.94□□□□□ -0.18
CLIP2-209ENST00000493166 POSTNQ15063 836 aa13.94□□□□□ -0.18
CLIP2-209ENST00000493166 SKIV2LQ15477 1246 aaKnown RBP13.94□□□□□ -0.18
CLIP2-209ENST00000493166 KMT5BQ4FZB7 885 aa13.94□□□□□ -0.18
CLIP2-209ENST00000493166 EPM2AIP1Q7L775 607 aaPredicted RBP13.94□□□□□ -0.18
CLIP2-209ENST00000493166 TMEM87AQ8NBN3 555 aa13.94□□□□□ -0.18
CLIP2-209ENST00000493166 MICAL1Q8TDZ2 1067 aa13.94□□□□□ -0.18
CLIP2-209ENST00000493166 BCL7CQ8WUZ0 217 aaPredicted RBP13.94□□□□□ -0.18
CLIP2-209ENST00000493166 RPF1Q9H9Y2 349 aaKnown RBP13.94□□□□□ -0.18
CLIP2-209ENST00000493166 ENTPD7Q9NQZ7 604 aa13.94□□□□□ -0.18
CLIP2-209ENST00000493166 AGO2Q9UKV8 859 aaKnown RBP13.94□□□□□ -0.18
CLIP2-209ENST00000493166 STYXL1Q9Y6J8 313 aa13.94□□□□□ -0.18
CLIP2-209ENST00000493166 SMIM28A0A1B0GU29 152 aa13.93□□□□□ -0.18
CLIP2-209ENST00000493166 CASTOR2A6NHX0 329 aa13.93□□□□□ -0.18
CLIP2-209ENST00000493166 FAM189A1O60320 539 aa13.93□□□□□ -0.18
CLIP2-209ENST00000493166 GADD45BO75293 160 aaPredicted RBP13.93□□□□□ -0.18
CLIP2-209ENST00000493166 KCNE1P15382 129 aa13.93□□□□□ -0.18
CLIP2-209ENST00000493166 IRS1P35568 1242 aa13.93□□□□□ -0.18
CLIP2-209ENST00000493166 PPP2R3AQ06190 1150 aa13.93□□□□□ -0.18
CLIP2-209ENST00000493166 DPYDQ12882 1025 aa13.93□□□□□ -0.18
CLIP2-209ENST00000493166 PSMD2Q13200 908 aa13.93□□□□□ -0.18
CLIP2-209ENST00000493166 SNW1Q13573 536 aaKnown RBP13.93□□□□□ -0.18
CLIP2-209ENST00000493166 SLC10A6Q3KNW5 377 aa13.93□□□□□ -0.18
CLIP2-209ENST00000493166 XKR4Q5GH76 650 aa13.93□□□□□ -0.18
CLIP2-209ENST00000493166 TCEAL5Q5H9L2 206 aa13.93□□□□□ -0.18
CLIP2-209ENST00000493166 ZBTB41Q5SVQ8 909 aa13.93□□□□□ -0.18
CLIP2-209ENST00000493166 PLPP4Q5VZY2 271 aa13.93□□□□□ -0.18
CLIP2-209ENST00000493166 PDE12Q6L8Q7 609 aaKnown RBP13.93□□□□□ -0.18
CLIP2-209ENST00000493166 ALKAL1Q6UXT8 129 aa13.93□□□□□ -0.18
CLIP2-209ENST00000493166 TMC7Q7Z402 723 aa13.93□□□□□ -0.18
CLIP2-209ENST00000493166 DDX53Q86TM3 631 aaKnown RBP13.93□□□□□ -0.18
CLIP2-209ENST00000493166 ENGASEQ8NFI3 743 aa13.93□□□□□ -0.18
CLIP2-209ENST00000493166 ZNF507Q8TCN5 953 aa13.93□□□□□ -0.18
CLIP2-209ENST00000493166 SCFD1Q8WVM8 642 aa13.93□□□□□ -0.18
CLIP2-209ENST00000493166 PPP2R3CQ969Q6 453 aa13.93□□□□□ -0.18
CLIP2-209ENST00000493166 PPP1R10Q96QC0 940 aaKnown RBP13.93□□□□□ -0.18
CLIP2-209ENST00000493166 TCF25Q9BQ70 676 aa13.93□□□□□ -0.18
CLIP2-209ENST00000493166 COLEC11Q9BWP8 271 aa13.93□□□□□ -0.18
CLIP2-209ENST00000493166 PLEKHA5Q9HAU0 1116 aa13.93□□□□□ -0.18
CLIP2-209ENST00000493166 SLC38A7Q9NVC3 462 aa13.93□□□□□ -0.18
CLIP2-209ENST00000493166 MARCH5Q9NX47 278 aa13.93□□□□□ -0.18
CLIP2-209ENST00000493166 CNTN3Q9P232 1028 aa13.93□□□□□ -0.18
CLIP2-209ENST00000493166 CACNG4Q9UBN1 327 aa13.93□□□□□ -0.18
CLIP2-209ENST00000493166 STK39Q9UEW8 545 aa13.93□□□□□ -0.18
CLIP2-209ENST00000493166 KINO60870 393 aaKnown RBP13.92□□□□□ -0.18
CLIP2-209ENST00000493166 GARTP22102 1010 aa13.92□□□□□ -0.18
CLIP2-209ENST00000493166 ADSSP30520 456 aa13.92□□□□□ -0.18
CLIP2-209ENST00000493166 CA8P35219 290 aa13.92□□□□□ -0.18
CLIP2-209ENST00000493166 ACOT2P49753 483 aa13.92□□□□□ -0.18
CLIP2-209ENST00000493166 ERVFC1P60507 584 aa13.92□□□□□ -0.18
CLIP2-209ENST00000493166 HSP90AA2PQ14568 343 aaPredicted RBP13.92□□□□□ -0.18
CLIP2-209ENST00000493166 BMS1Q14692 1282 aaKnown RBP13.92□□□□□ -0.18
CLIP2-209ENST00000493166 NAB2Q15742 525 aa13.92□□□□□ -0.18
CLIP2-209ENST00000493166 ENOX2Q16206 610 aaKnown RBP13.92□□□□□ -0.18
CLIP2-209ENST00000493166 ARMCX5Q6P1M9 558 aa13.92□□□□□ -0.18
CLIP2-209ENST00000493166 NELFCDQ8IXH7 590 aa13.92□□□□□ -0.18
CLIP2-209ENST00000493166 VPS52Q8N1B4 723 aa13.92□□□□□ -0.18
CLIP2-209ENST00000493166 RABGGTAQ92696 567 aa13.92□□□□□ -0.18
CLIP2-209ENST00000493166 FAM212AQ96EL1 285 aa13.92□□□□□ -0.18
CLIP2-209ENST00000493166 TIGD1Q96MW7 591 aa13.92□□□□□ -0.18
CLIP2-209ENST00000493166 ZMAT2Q96NC0 199 aaKnown RBP13.92□□□□□ -0.18
CLIP2-209ENST00000493166 HOOK1Q9UJC3 728 aaKnown RBP13.92□□□□□ -0.18
CLIP2-209ENST00000493166 CPSF3Q9UKF6 684 aaKnown RBP13.92□□□□□ -0.18
CLIP2-209ENST00000493166 PCDHGC5Q9Y5F6 944 aa13.92□□□□□ -0.18
CLIP2-209ENST00000493166 A0A0C4DFX4 3053 aa13.92□□□□□ -0.18
CLIP2-209ENST00000493166 CUL9Q8IWT3 2517 aa13.92□□□□□ -0.18
CLIP2-209ENST00000493166 PLXNA3P51805 1871 aa13.91□□□□□ -0.18
CLIP2-209ENST00000493166 TTC26A0AVF1 554 aa13.91□□□□□ -0.18
CLIP2-209ENST00000493166 LACTBL1A8MY62 500 aa13.91□□□□□ -0.18
CLIP2-209ENST00000493166 F8W810 466 aa13.91□□□□□ -0.18
CLIP2-209ENST00000493166 FSCN2O14926 492 aa13.91□□□□□ -0.18
CLIP2-209ENST00000493166 MEFVO15553 781 aaPredicted RBP13.91□□□□□ -0.18
CLIP2-209ENST00000493166 HOXD13P35453 343 aa13.91□□□□□ -0.18
CLIP2-209ENST00000493166 UBE2HP62256 183 aa13.91□□□□□ -0.18
CLIP2-209ENST00000493166 STK4Q13043 487 aa13.91□□□□□ -0.18
CLIP2-209ENST00000493166 PNOCQ13519 176 aa13.91□□□□□ -0.18
CLIP2-209ENST00000493166 SMC1AQ14683 1233 aaKnown RBP13.91□□□□□ -0.18
CLIP2-209ENST00000493166 BMT2Q1RMZ1 405 aa13.91□□□□□ -0.18
CLIP2-209ENST00000493166 KIAA0895Q8NCT3 520 aa13.91□□□□□ -0.18
CLIP2-209ENST00000493166 HASPINQ8TF76 798 aa13.91□□□□□ -0.18
CLIP2-209ENST00000493166 NOC3LQ8WTT2 800 aaKnown RBP13.91□□□□□ -0.18
CLIP2-209ENST00000493166 C18orf25Q96B23 403 aaPredicted RBP13.91□□□□□ -0.18
CLIP2-209ENST00000493166 SAAL1Q96ER3 474 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms