RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 ARMCX5Q6P1M9 558 aa15.23■□□□□ 0.03
CCM2-217ENST00000492883 ALKAL1Q6UXT8 129 aa15.23■□□□□ 0.03
CCM2-217ENST00000492883 PPM1EQ8WY54 764 aa15.23■□□□□ 0.03
CCM2-217ENST00000492883 FAM212AQ96EL1 285 aa15.23■□□□□ 0.03
CCM2-217ENST00000492883 SNX27Q96L92 541 aa15.23■□□□□ 0.03
CCM2-217ENST00000492883 COLEC11Q9BWP8 271 aa15.23■□□□□ 0.03
CCM2-217ENST00000492883 PLEKHA5Q9HAU0 1116 aa15.23■□□□□ 0.03
CCM2-217ENST00000492883 PRG3Q9Y2Y8 225 aaPredicted RBP15.23■□□□□ 0.03
CCM2-217ENST00000492883 UBE4BO95155 1302 aa15.22■□□□□ 0.03
CCM2-217ENST00000492883 RHOBTB3O94955 611 aa15.22■□□□□ 0.03
CCM2-217ENST00000492883 LDHAP00338 332 aaKnown RBP15.22■□□□□ 0.03
CCM2-217ENST00000492883 CXCL8P10145 99 aa15.22■□□□□ 0.03
CCM2-217ENST00000492883 GARTP22102 1010 aa15.22■□□□□ 0.03
CCM2-217ENST00000492883 HOXD13P35453 343 aa15.22■□□□□ 0.03
CCM2-217ENST00000492883 TUSC3Q13454 348 aa15.22■□□□□ 0.03
CCM2-217ENST00000492883 KCNB1Q14721 858 aa15.22■□□□□ 0.03
CCM2-217ENST00000492883 CCDC85BQ15834 202 aaPredicted RBP15.22■□□□□ 0.03
CCM2-217ENST00000492883 KNOP1Q1ED39 458 aaKnown RBP15.22■□□□□ 0.03
CCM2-217ENST00000492883 XKR4Q5GH76 650 aa15.22■□□□□ 0.03
CCM2-217ENST00000492883 ZBTB41Q5SVQ8 909 aa15.22■□□□□ 0.03
CCM2-217ENST00000492883 HS2ST1Q7LGA3 356 aa15.22■□□□□ 0.03
CCM2-217ENST00000492883 KIAA0895Q8NCT3 520 aa15.22■□□□□ 0.03
CCM2-217ENST00000492883 NOC3LQ8WTT2 800 aaKnown RBP15.22■□□□□ 0.03
CCM2-217ENST00000492883 SMARCE1Q969G3 411 aa15.22■□□□□ 0.03
CCM2-217ENST00000492883 IGSF21Q96ID5 467 aa15.22■□□□□ 0.03
CCM2-217ENST00000492883 PCIF1Q9H4Z3 704 aa15.22■□□□□ 0.03
CCM2-217ENST00000492883 SLC38A7Q9NVC3 462 aa15.22■□□□□ 0.03
CCM2-217ENST00000492883 RMND1Q9NWS8 449 aa15.22■□□□□ 0.03
CCM2-217ENST00000492883 CPSF3Q9UKF6 684 aaKnown RBP15.22■□□□□ 0.03
CCM2-217ENST00000492883 LZTS1Q9Y250 596 aa15.22■□□□□ 0.03
CCM2-217ENST00000492883 CASTOR2A6NHX0 329 aa15.21■□□□□ 0.03
CCM2-217ENST00000492883 LACTBL1A8MY62 500 aa15.21■□□□□ 0.03
CCM2-217ENST00000492883 GOLGA6L22H0YM25 854 aa15.21■□□□□ 0.03
CCM2-217ENST00000492883 FAM189A1O60320 539 aa15.21■□□□□ 0.03
CCM2-217ENST00000492883 KIF20AO95235 890 aa15.21■□□□□ 0.03
CCM2-217ENST00000492883 KCNE1P15382 129 aa15.21■□□□□ 0.03
CCM2-217ENST00000492883 DNAJB1P25685 340 aa15.21■□□□□ 0.03
CCM2-217ENST00000492883 SNRPFP62306 86 aaKnown RBP15.21■□□□□ 0.03
CCM2-217ENST00000492883 PPP2R3AQ06190 1150 aa15.21■□□□□ 0.03
CCM2-217ENST00000492883 BMS1Q14692 1282 aaKnown RBP15.21■□□□□ 0.03
CCM2-217ENST00000492883 ENOX2Q16206 610 aaKnown RBP15.21■□□□□ 0.03
CCM2-217ENST00000492883 BMT2Q1RMZ1 405 aa15.21■□□□□ 0.03
CCM2-217ENST00000492883 TMEM173Q86WV6 379 aaPredicted RBP15.21■□□□□ 0.03
CCM2-217ENST00000492883 ELOA2Q8IYF1 753 aaPredicted RBP15.21■□□□□ 0.03
CCM2-217ENST00000492883 MAFAQ8NHW3 353 aaPredicted RBP15.21■□□□□ 0.03
CCM2-217ENST00000492883 RABGGTAQ92696 567 aa15.21■□□□□ 0.03
CCM2-217ENST00000492883 ERCC4Q92889 916 aaPredicted RBP15.21■□□□□ 0.03
CCM2-217ENST00000492883 SAAL1Q96ER3 474 aa15.21■□□□□ 0.03
CCM2-217ENST00000492883 ZMAT2Q96NC0 199 aaKnown RBP15.21■□□□□ 0.03
CCM2-217ENST00000492883 PPP1R10Q96QC0 940 aaKnown RBP15.21■□□□□ 0.03
CCM2-217ENST00000492883 CBWD1Q9BRT8 395 aa15.21■□□□□ 0.03
CCM2-217ENST00000492883 FAM213AQ9BRX8 229 aa15.21■□□□□ 0.03
CCM2-217ENST00000492883 TLR9Q9NR96 1032 aa15.21■□□□□ 0.03
CCM2-217ENST00000492883 CNTN3Q9P232 1028 aa15.21■□□□□ 0.03
CCM2-217ENST00000492883 PCDHA5Q9Y5H7 936 aa15.21■□□□□ 0.03
CCM2-217ENST00000492883 TTC26A0AVF1 554 aa15.2■□□□□ 0.02
CCM2-217ENST00000492883 GOLGA8IPA6NC78 632 aa15.2■□□□□ 0.02
CCM2-217ENST00000492883 GOLGA8JA6NMD2 632 aa15.2■□□□□ 0.02
CCM2-217ENST00000492883 KIAA0391O15091 583 aaKnown RBP15.2■□□□□ 0.02
CCM2-217ENST00000492883 TGFB1I1O43294 461 aa15.2■□□□□ 0.02
CCM2-217ENST00000492883 EXTL3O43909 919 aa15.2■□□□□ 0.02
CCM2-217ENST00000492883 TADA2AO75478 443 aa15.2■□□□□ 0.02
CCM2-217ENST00000492883 SPAG1Q07617 926 aa15.2■□□□□ 0.02
CCM2-217ENST00000492883 CAMK1Q14012 370 aa15.2■□□□□ 0.02
CCM2-217ENST00000492883 TMC7Q7Z402 723 aa15.2■□□□□ 0.02
CCM2-217ENST00000492883 DDX53Q86TM3 631 aaKnown RBP15.2■□□□□ 0.02
CCM2-217ENST00000492883 CD302Q8IX05 232 aa15.2■□□□□ 0.02
CCM2-217ENST00000492883 GSDMAQ96QA5 445 aa15.2■□□□□ 0.02
CCM2-217ENST00000492883 AGPAT3Q9NRZ7 376 aa15.2■□□□□ 0.02
CCM2-217ENST00000492883 CGNQ9P2M7 1197 aaKnown RBP15.2■□□□□ 0.02
CCM2-217ENST00000492883 CACNG4Q9UBN1 327 aa15.2■□□□□ 0.02
CCM2-217ENST00000492883 MAPK8IP1Q9UQF2 711 aa15.2■□□□□ 0.02
CCM2-217ENST00000492883 CLIC2O15247 247 aa15.19■□□□□ 0.02
CCM2-217ENST00000492883 MEFVO15553 781 aaPredicted RBP15.19■□□□□ 0.02
CCM2-217ENST00000492883 CA8P35219 290 aa15.19■□□□□ 0.02
CCM2-217ENST00000492883 IRS1P35568 1242 aa15.19■□□□□ 0.02
CCM2-217ENST00000492883 ERVFC1P60507 584 aa15.19■□□□□ 0.02
CCM2-217ENST00000492883 POU5F1Q01860 360 aaKnown RBP15.19■□□□□ 0.02
CCM2-217ENST00000492883 HSP90AA2PQ14568 343 aaPredicted RBP15.19■□□□□ 0.02
CCM2-217ENST00000492883 SKIV2LQ15477 1246 aaKnown RBP15.19■□□□□ 0.02
CCM2-217ENST00000492883 NAB2Q15742 525 aa15.19■□□□□ 0.02
CCM2-217ENST00000492883 TIGD5Q53EQ6 642 aa15.19■□□□□ 0.02
CCM2-217ENST00000492883 PDE12Q6L8Q7 609 aaKnown RBP15.19■□□□□ 0.02
CCM2-217ENST00000492883 CRELD2Q6UXH1 353 aaPredicted RBP15.19■□□□□ 0.02
CCM2-217ENST00000492883 VPS52Q8N1B4 723 aa15.19■□□□□ 0.02
CCM2-217ENST00000492883 GPD1LQ8N335 351 aa15.19■□□□□ 0.02
CCM2-217ENST00000492883 GOLGA5Q8TBA6 731 aa15.19■□□□□ 0.02
CCM2-217ENST00000492883 BCL7CQ8WUZ0 217 aaPredicted RBP15.19■□□□□ 0.02
CCM2-217ENST00000492883 C18orf25Q96B23 403 aaPredicted RBP15.19■□□□□ 0.02
CCM2-217ENST00000492883 KIF12Q96FN5 646 aa15.19■□□□□ 0.02
CCM2-217ENST00000492883 DDX27Q96GQ7 796 aaKnown RBP15.19■□□□□ 0.02
CCM2-217ENST00000492883 UROC1Q96N76 676 aa15.19■□□□□ 0.02
CCM2-217ENST00000492883 TSPAN18Q96SJ8 248 aa15.19■□□□□ 0.02
CCM2-217ENST00000492883 TCF25Q9BQ70 676 aa15.19■□□□□ 0.02
CCM2-217ENST00000492883 PAAF1Q9BRP4 392 aa15.19■□□□□ 0.02
CCM2-217ENST00000492883 NSUN3Q9H649 340 aaKnown RBP15.19■□□□□ 0.02
CCM2-217ENST00000492883 ASB7Q9H672 318 aa15.19■□□□□ 0.02
CCM2-217ENST00000492883 NGRNQ9NPE2 291 aaKnown RBP15.19■□□□□ 0.02
CCM2-217ENST00000492883 ENTPD7Q9NQZ7 604 aa15.19■□□□□ 0.02
CCM2-217ENST00000492883 LMBRD1Q9NUN5 540 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms