RNA–Protein interactions for RNA: ENST00000492816.6

FN1-224, Transcript of fibronectin 1, humanhuman

TSL 5

Gene FN1, Length 9,171 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-224ENST00000492816 XRRA1Q6P2D8 792 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 HOMEZQ8IX15 550 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 CALR3Q96L12 384 aaKnown RBP5.7□□□□□ -1.5
FN1-224ENST00000492816 KRT82Q9NSB4 513 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 SMARCAL1Q9NZC9 954 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 CEP170Q5SW79 1584 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 UBE4BO95155 1302 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 F5H5T6 163 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 SUPT3HO75486 399 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 ENO2P09104 434 aaPredicted RBP5.7□□□□□ -1.5
FN1-224ENST00000492816 HOXA13P31271 388 aaPredicted RBP5.7□□□□□ -1.5
FN1-224ENST00000492816 ZNF827Q17R98 1081 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 CLEC16AQ2KHT3 1053 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 CTXN3Q4LDR2 81 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 LLGL2Q6P1M3 1020 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 CINPQ9BW66 212 aaPredicted RBP5.7□□□□□ -1.5
FN1-224ENST00000492816 IARS2Q9NSE4 1012 aaKnown RBP5.7□□□□□ -1.5
FN1-224ENST00000492816 ANAPC2Q9UJX6 822 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 ZMYM2Q9UBW7 1377 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.7□□□□□ -1.5
FN1-224ENST00000492816 AFPP02771 609 aaKnown RBP5.7□□□□□ -1.5
FN1-224ENST00000492816 CXCR2P25025 360 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 RFC1P35251 1148 aaPredicted RBP5.7□□□□□ -1.5
FN1-224ENST00000492816 CLCN6P51797 869 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 USP4Q13107 963 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 LRRC32Q14392 662 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 TCEAL5Q5H9L2 206 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 MTSS1LQ765P7 747 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 RRAGAQ7L523 313 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 GAS2L3Q86XJ1 694 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 C8orf58Q8NAV2 365 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 KIAA1143Q96AT1 154 aaPredicted RBP5.7□□□□□ -1.5
FN1-224ENST00000492816 SPZ1Q9BXG8 430 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 DNAJC25Q9H1X3 360 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 OSGEPL1Q9H4B0 414 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 PCDHA10Q9Y5I2 948 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.7□□□□□ -1.5
FN1-224ENST00000492816 A6NNZ2 444 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 FYNP06241 537 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 CASRP41180 1078 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 EIF4A1P60842 406 aaKnown RBP5.7□□□□□ -1.5
FN1-224ENST00000492816 TUBB8Q3ZCM7 444 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 ANKRD20A4Q4UJ75 823 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 ATP13A4Q4VNC1 1196 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 ANKRD20A2Q5SQ80 823 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 ANKRD20A1Q5TYW2 823 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 CAMK1DQ8IU85 385 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 DDI1Q8WTU0 396 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 HAPLN3Q96S86 360 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 SCHIP1Q9P0W5 487 aaPredicted RBP5.7□□□□□ -1.5
FN1-224ENST00000492816 PCDHA6Q9UN73 950 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 PCDHA8Q9Y5H6 950 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 CDK12Q9NYV4 1490 aaPredicted RBP5.7□□□□□ -1.5
FN1-224ENST00000492816 C1QTNF3-AMACRE9PGA6 284 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 ZBTB5O15062 677 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 MAFGO15525 162 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 PRKCBP05771 671 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 PSEN2P49810 448 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 LIG3P49916 1009 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 TPI1P60174 286 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 PSRC1Q6PGN9 363 aaPredicted RBP5.7□□□□□ -1.5
FN1-224ENST00000492816 PI16Q6UXB8 463 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 CHSY1Q86X52 802 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 SCYL3Q8IZE3 742 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 IGSF22Q8N9C0 903 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 PPHLN1Q8NEY8 458 aaKnown RBP5.7□□□□□ -1.5
FN1-224ENST00000492816 GPKOWQ92917 476 aaPredicted RBP eCLIP5.7□□□□□ -1.5
FN1-224ENST00000492816 PABPC5Q96DU9 382 aaKnown RBP5.7□□□□□ -1.5
FN1-224ENST00000492816 KIFC3Q9BVG8 833 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 CYP4F11Q9HBI6 524 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 ARFGAP3Q9NP61 516 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 ZDHHC4Q9NPG8 344 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 INTS10Q9NVR2 710 aaKnown RBP5.7□□□□□ -1.5
FN1-224ENST00000492816 KIF17Q9P2E2 1029 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 A2ML1A8K2U0 1454 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 KIF24Q5T7B8 1368 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 ZMYM6O95789 1325 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 GTPBP10A4D1E9 387 aaKnown RBP5.7□□□□□ -1.5
FN1-224ENST00000492816 ORC4O43929 436 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 SLC2A4P14672 509 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 GARTP22102 1010 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 VPS41P49754 854 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 VAMP7P51809 220 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 MAP3K10Q02779 954 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 FAM160A1Q05DH4 1040 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 PTGISQ16647 500 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 ANKRD40Q6AI12 368 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 PPP4R3CPQ6ZMV5 832 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 NOSTRINQ8IVI9 506 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 SCAIQ8N9R8 606 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 TTC13Q8NBP0 860 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 FAM151AQ8WW52 585 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 CAPNS2Q96L46 248 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 ATXN3LQ9H3M9 355 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 MAPK8IP1Q9UQF2 711 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 CHMP2BQ9UQN3 213 aa5.7□□□□□ -1.5
FN1-224ENST00000492816 NDUFS3O75489 264 aa5.69□□□□□ -1.5
FN1-224ENST00000492816 AKAP5P24588 427 aa5.69□□□□□ -1.5
FN1-224ENST00000492816 PTRHD1Q6GMV3 140 aaKnown RBP5.69□□□□□ -1.5
FN1-224ENST00000492816 CENPPQ6IPU0 288 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms