RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 PDZD7Q9H5P4 517 aa12.14□□□□□ -0.47
TMEM39A-211ENST00000491685 KCNG1Q9UIX4 513 aa12.14□□□□□ -0.47
TMEM39A-211ENST00000491685 KIAA1024Q9UPX6 916 aa12.14□□□□□ -0.47
TMEM39A-211ENST00000491685 GIT1Q9Y2X7 761 aa12.14□□□□□ -0.47
TMEM39A-211ENST00000491685 MYH11P35749 1972 aa12.14□□□□□ -0.47
TMEM39A-211ENST00000491685 MYH15Q9Y2K3 1946 aa12.13□□□□□ -0.47
TMEM39A-211ENST00000491685 SPDYE4A6NLX3 237 aa12.13□□□□□ -0.47
TMEM39A-211ENST00000491685 PTGESO14684 152 aa12.13□□□□□ -0.47
TMEM39A-211ENST00000491685 NR1I2O75469 434 aa12.13□□□□□ -0.47
TMEM39A-211ENST00000491685 RFPL2O75678 378 aa12.13□□□□□ -0.47
TMEM39A-211ENST00000491685 SPATA31D3P0C874 917 aa12.13□□□□□ -0.47
TMEM39A-211ENST00000491685 RPL17P18621 184 aaKnown RBP12.13□□□□□ -0.47
TMEM39A-211ENST00000491685 IGFBP6P24592 240 aaPredicted RBP12.13□□□□□ -0.47
TMEM39A-211ENST00000491685 AVPR2P30518 371 aa12.13□□□□□ -0.47
TMEM39A-211ENST00000491685 DSG1Q02413 1049 aa12.13□□□□□ -0.47
TMEM39A-211ENST00000491685 GRIK3Q13003 919 aa12.13□□□□□ -0.47
TMEM39A-211ENST00000491685 EEF1DP3Q658K8 133 aa12.13□□□□□ -0.47
TMEM39A-211ENST00000491685 FUT10Q6P4F1 479 aa12.13□□□□□ -0.47
TMEM39A-211ENST00000491685 PADI6Q6TGC4 694 aa12.13□□□□□ -0.47
TMEM39A-211ENST00000491685 SPATA31D4Q6ZUB0 917 aa12.13□□□□□ -0.47
TMEM39A-211ENST00000491685 GLYCTKQ8IVS8 523 aa12.13□□□□□ -0.47
TMEM39A-211ENST00000491685 TMEM105Q8N8V8 129 aa12.13□□□□□ -0.47
TMEM39A-211ENST00000491685 HASPINQ8TF76 798 aa12.13□□□□□ -0.47
TMEM39A-211ENST00000491685 CCSER1Q9C0I3 900 aa12.13□□□□□ -0.47
TMEM39A-211ENST00000491685 FZD8Q9H461 694 aa12.13□□□□□ -0.47
TMEM39A-211ENST00000491685 RXFP1Q9HBX9 757 aa12.13□□□□□ -0.47
TMEM39A-211ENST00000491685 CHST7Q9NS84 486 aa12.13□□□□□ -0.47
TMEM39A-211ENST00000491685 PARP2Q9UGN5 583 aa12.13□□□□□ -0.47
TMEM39A-211ENST00000491685 COL4A3Q01955 1670 aa12.13□□□□□ -0.47
TMEM39A-211ENST00000491685 ARHGEF35A5YM69 484 aa12.12□□□□□ -0.47
TMEM39A-211ENST00000491685 CASTOR2A6NHX0 329 aa12.12□□□□□ -0.47
TMEM39A-211ENST00000491685 KIF4AO95239 1232 aa12.12□□□□□ -0.47
TMEM39A-211ENST00000491685 LIG1P18858 919 aa12.12□□□□□ -0.47
TMEM39A-211ENST00000491685 IL17AQ16552 155 aa12.12□□□□□ -0.47
TMEM39A-211ENST00000491685 RTP2Q5QGT7 225 aa12.12□□□□□ -0.47
TMEM39A-211ENST00000491685 RRAGBQ5VZM2 374 aa12.12□□□□□ -0.47
TMEM39A-211ENST00000491685 ADALQ6DHV7 355 aa12.12□□□□□ -0.47
TMEM39A-211ENST00000491685 PRSS55Q6UWB4 352 aaPredicted RBP12.12□□□□□ -0.47
TMEM39A-211ENST00000491685 CCDC73Q6ZRK6 1079 aa12.12□□□□□ -0.47
TMEM39A-211ENST00000491685 CCDC149Q6ZUS6 474 aa12.12□□□□□ -0.47
TMEM39A-211ENST00000491685 ERMP1Q7Z2K6 904 aa12.12□□□□□ -0.47
TMEM39A-211ENST00000491685 UBALD2Q8IYN6 164 aa12.12□□□□□ -0.47
TMEM39A-211ENST00000491685 MCPH1Q8NEM0 835 aa12.12□□□□□ -0.47
TMEM39A-211ENST00000491685 ZNF707Q96C28 371 aaPredicted RBP12.12□□□□□ -0.47
TMEM39A-211ENST00000491685 CCDC34Q96HJ3 373 aa12.12□□□□□ -0.47
TMEM39A-211ENST00000491685 LRRC27Q9C0I9 530 aa12.12□□□□□ -0.47
TMEM39A-211ENST00000491685 PRMT7Q9NVM4 692 aaPredicted RBP12.12□□□□□ -0.47
TMEM39A-211ENST00000491685 SNTG2Q9NY99 539 aa12.12□□□□□ -0.47
TMEM39A-211ENST00000491685 DPP7Q9UHL4 492 aa12.12□□□□□ -0.47
TMEM39A-211ENST00000491685 FBXO2Q9UK22 296 aaPredicted RBP12.12□□□□□ -0.47
TMEM39A-211ENST00000491685 USTQ9Y2C2 406 aa12.12□□□□□ -0.47
TMEM39A-211ENST00000491685 SSX2IPQ9Y2D8 614 aa12.12□□□□□ -0.47
TMEM39A-211ENST00000491685 ZMYM2Q9UBW7 1377 aa12.12□□□□□ -0.47
TMEM39A-211ENST00000491685 FAM186AA6NE01 2351 aa12.12□□□□□ -0.47
TMEM39A-211ENST00000491685 CITO14578 2027 aa12.11□□□□□ -0.47
TMEM39A-211ENST00000491685 NOTCH4Q99466 2003 aa12.11□□□□□ -0.47
TMEM39A-211ENST00000491685 PP2D1A8MPX8 630 aa12.11□□□□□ -0.47
TMEM39A-211ENST00000491685 RECQL4O94761 1208 aa12.11□□□□□ -0.47
TMEM39A-211ENST00000491685 GLUD1P00367 558 aa12.11□□□□□ -0.47
TMEM39A-211ENST00000491685 PRKCBP05771 671 aa12.11□□□□□ -0.47
TMEM39A-211ENST00000491685 ADH1AP07327 375 aa12.11□□□□□ -0.47
TMEM39A-211ENST00000491685 CYP11B2P19099 503 aa12.11□□□□□ -0.47
TMEM39A-211ENST00000491685 CDC25AP30304 524 aa12.11□□□□□ -0.47
TMEM39A-211ENST00000491685 NAB2Q15742 525 aa12.11□□□□□ -0.47
TMEM39A-211ENST00000491685 FAM187BQ17R55 369 aa12.11□□□□□ -0.47
TMEM39A-211ENST00000491685 CWF19L1Q69YN2 538 aaKnown RBP12.11□□□□□ -0.47
TMEM39A-211ENST00000491685 C15orf39Q6ZRI6 1047 aa12.11□□□□□ -0.47
TMEM39A-211ENST00000491685 CLEC17AQ6ZS10 378 aa12.11□□□□□ -0.47
TMEM39A-211ENST00000491685 PALB2Q86YC2 1186 aa12.11□□□□□ -0.47
TMEM39A-211ENST00000491685 ZBTB8OSQ8IWT0 167 aa12.11□□□□□ -0.47
TMEM39A-211ENST00000491685 CMASQ8NFW8 434 aaPredicted RBP12.11□□□□□ -0.47
TMEM39A-211ENST00000491685 LEO1Q8WVC0 666 aaPredicted RBP12.11□□□□□ -0.47
TMEM39A-211ENST00000491685 RSAD2Q8WXG1 361 aa12.11□□□□□ -0.47
TMEM39A-211ENST00000491685 RIN2Q8WYP3 895 aaPredicted RBP12.11□□□□□ -0.47
TMEM39A-211ENST00000491685 PRIMPOLQ96LW4 560 aa12.11□□□□□ -0.47
TMEM39A-211ENST00000491685 COLEC11Q9BWP8 271 aa12.11□□□□□ -0.47
TMEM39A-211ENST00000491685 DDX19AQ9NUU7 478 aaKnown RBP12.11□□□□□ -0.47
TMEM39A-211ENST00000491685 ADAM28Q9UKQ2 775 aa12.11□□□□□ -0.47
TMEM39A-211ENST00000491685 PCDHA7Q9UN72 937 aa12.11□□□□□ -0.47
TMEM39A-211ENST00000491685 RIF1Q5UIP0 2472 aaKnown RBP12.1□□□□□ -0.47
TMEM39A-211ENST00000491685 CCDC195A0A1B0GUA6 201 aa12.1□□□□□ -0.47
TMEM39A-211ENST00000491685 PRR23AA6NEV1 266 aa12.1□□□□□ -0.47
TMEM39A-211ENST00000491685 H0Y858 1186 aa12.1□□□□□ -0.47
TMEM39A-211ENST00000491685 N4BP3O15049 544 aa12.1□□□□□ -0.47
TMEM39A-211ENST00000491685 TGM5O43548 720 aa12.1□□□□□ -0.47
TMEM39A-211ENST00000491685 GALR2O43603 387 aaPredicted RBP12.1□□□□□ -0.47
TMEM39A-211ENST00000491685 NARSO43776 548 aaKnown RBP12.1□□□□□ -0.47
TMEM39A-211ENST00000491685 AMPD3Q01432 767 aa12.1□□□□□ -0.47
TMEM39A-211ENST00000491685 TUSC3Q13454 348 aa12.1□□□□□ -0.47
TMEM39A-211ENST00000491685 PRPF4BQ13523 1007 aaKnown RBP12.1□□□□□ -0.47
TMEM39A-211ENST00000491685 HSP90AA2PQ14568 343 aaPredicted RBP12.1□□□□□ -0.47
TMEM39A-211ENST00000491685 HYIQ5T013 277 aa12.1□□□□□ -0.47
TMEM39A-211ENST00000491685 NT5DC1Q5TFE4 455 aa12.1□□□□□ -0.47
TMEM39A-211ENST00000491685 ASCL5Q7RTU5 278 aa12.1□□□□□ -0.47
TMEM39A-211ENST00000491685 IQUBQ8NA54 791 aa12.1□□□□□ -0.47
TMEM39A-211ENST00000491685 ST13P5Q8NFI4 369 aaPredicted RBP12.1□□□□□ -0.47
TMEM39A-211ENST00000491685 CLIC6Q96NY7 704 aa12.1□□□□□ -0.47
TMEM39A-211ENST00000491685 MYADMQ96S97 322 aa12.1□□□□□ -0.47
TMEM39A-211ENST00000491685 BHMT2Q9H2M3 363 aa12.1□□□□□ -0.47
TMEM39A-211ENST00000491685 PTPRZ1P23471 2315 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms