RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 PPP1R10Q96QC0 940 aaKnown RBP18.65■□□□□ 0.58
HMG20B-212ENST00000487894 PAAF1Q9BRP4 392 aa18.65■□□□□ 0.58
HMG20B-212ENST00000487894 HERC2P3Q9BVR0 1158 aa18.65■□□□□ 0.58
HMG20B-212ENST00000487894 TOPORSQ9NS56 1045 aaPredicted RBP18.65■□□□□ 0.58
HMG20B-212ENST00000487894 IRAK3Q9Y616 596 aa18.65■□□□□ 0.58
HMG20B-212ENST00000487894 NCOR1O75376 2440 aa18.64■□□□□ 0.58
HMG20B-212ENST00000487894 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.64■□□□□ 0.57
HMG20B-212ENST00000487894 FSD2A1L4K1 749 aa18.64■□□□□ 0.57
HMG20B-212ENST00000487894 CASTOR2A6NHX0 329 aa18.64■□□□□ 0.57
HMG20B-212ENST00000487894 POLR2DO15514 142 aaKnown RBP18.64■□□□□ 0.57
HMG20B-212ENST00000487894 CLDN3O15551 220 aa18.64■□□□□ 0.57
HMG20B-212ENST00000487894 NR1I2O75469 434 aa18.64■□□□□ 0.57
HMG20B-212ENST00000487894 SOD2P04179 222 aa18.64■□□□□ 0.57
HMG20B-212ENST00000487894 IDEP14735 1019 aa18.64■□□□□ 0.57
HMG20B-212ENST00000487894 ABCD1P33897 745 aa18.64■□□□□ 0.57
HMG20B-212ENST00000487894 NDUFV1P49821 464 aa18.64■□□□□ 0.57
HMG20B-212ENST00000487894 LIG4P49917 911 aa18.64■□□□□ 0.57
HMG20B-212ENST00000487894 YARSP54577 528 aaKnown RBP18.64■□□□□ 0.57
HMG20B-212ENST00000487894 RBM10P98175 930 aaKnown RBP18.64■□□□□ 0.57
HMG20B-212ENST00000487894 KCNC3Q14003 757 aa18.64■□□□□ 0.57
HMG20B-212ENST00000487894 PTPN14Q15678 1187 aa18.64■□□□□ 0.57
HMG20B-212ENST00000487894 SEZ6Q53EL9 994 aa18.64■□□□□ 0.57
HMG20B-212ENST00000487894 ALKAL1Q6UXT8 129 aa18.64■□□□□ 0.57
HMG20B-212ENST00000487894 ZNF720Q7Z2F6 126 aa18.64■□□□□ 0.57
HMG20B-212ENST00000487894 IQUBQ8NA54 791 aa18.64■□□□□ 0.57
HMG20B-212ENST00000487894 ADAMTS19Q8TE59 1207 aa18.64■□□□□ 0.57
HMG20B-212ENST00000487894 RABGGTAQ92696 567 aa18.64■□□□□ 0.57
HMG20B-212ENST00000487894 SPATA32Q96LK8 384 aa18.64■□□□□ 0.57
HMG20B-212ENST00000487894 STRA6Q9BX79 667 aa18.64■□□□□ 0.57
HMG20B-212ENST00000487894 OLFML3Q9NRN5 406 aa18.64■□□□□ 0.57
HMG20B-212ENST00000487894 FAM13BQ9NYF5 915 aa18.64■□□□□ 0.57
HMG20B-212ENST00000487894 CLEC1BQ9P126 229 aa18.64■□□□□ 0.57
HMG20B-212ENST00000487894 STK39Q9UEW8 545 aa18.64■□□□□ 0.57
HMG20B-212ENST00000487894 BARX2Q9UMQ3 279 aaPredicted RBP18.64■□□□□ 0.57
HMG20B-212ENST00000487894 ATP6V1DQ9Y5K8 247 aa18.64■□□□□ 0.57
HMG20B-212ENST00000487894 FAM189A1O60320 539 aa18.63■□□□□ 0.57
HMG20B-212ENST00000487894 CXCL14O95715 111 aa18.63■□□□□ 0.57
HMG20B-212ENST00000487894 CA8P35219 290 aa18.63■□□□□ 0.57
HMG20B-212ENST00000487894 MATR3P43243 847 aaKnown RBP eCLIP18.63■□□□□ 0.57
HMG20B-212ENST00000487894 HSP90AA2PQ14568 343 aaPredicted RBP18.63■□□□□ 0.57
HMG20B-212ENST00000487894 HVCN1Q96D96 273 aa18.63■□□□□ 0.57
HMG20B-212ENST00000487894 MSLNLQ96KJ4 702 aa18.63■□□□□ 0.57
HMG20B-212ENST00000487894 ACAP3Q96P50 834 aa18.63■□□□□ 0.57
HMG20B-212ENST00000487894 COLEC11Q9BWP8 271 aa18.63■□□□□ 0.57
HMG20B-212ENST00000487894 TRIM9Q9C026 710 aa18.63■□□□□ 0.57
HMG20B-212ENST00000487894 MRPL44Q9H9J2 332 aaKnown RBP18.63■□□□□ 0.57
HMG20B-212ENST00000487894 MAGEF1Q9HAY2 307 aa18.63■□□□□ 0.57
HMG20B-212ENST00000487894 TBC1D7Q9P0N9 293 aa18.63■□□□□ 0.57
HMG20B-212ENST00000487894 CNTN3Q9P232 1028 aa18.63■□□□□ 0.57
HMG20B-212ENST00000487894 ADAM28Q9UKQ2 775 aa18.63■□□□□ 0.57
HMG20B-212ENST00000487894 C2orf16Q68DN1 1984 aa18.62■□□□□ 0.57
HMG20B-212ENST00000487894 SMIM28A0A1B0GU29 152 aa18.62■□□□□ 0.57
HMG20B-212ENST00000487894 KIF4AO95239 1232 aa18.62■□□□□ 0.57
HMG20B-212ENST00000487894 CASP5P51878 434 aa18.62■□□□□ 0.57
HMG20B-212ENST00000487894 COASYQ13057 564 aa18.62■□□□□ 0.57
HMG20B-212ENST00000487894 BMS1Q14692 1282 aaKnown RBP18.62■□□□□ 0.57
HMG20B-212ENST00000487894 CLUL1Q15846 466 aa18.62■□□□□ 0.57
HMG20B-212ENST00000487894 PTCRAQ6ISU1 281 aaPredicted RBP18.62■□□□□ 0.57
HMG20B-212ENST00000487894 FUT10Q6P4F1 479 aa18.62■□□□□ 0.57
HMG20B-212ENST00000487894 TAS1R1Q7RTX1 841 aa18.62■□□□□ 0.57
HMG20B-212ENST00000487894 ZMAT2Q96NC0 199 aaKnown RBP18.62■□□□□ 0.57
HMG20B-212ENST00000487894 FGFBP2Q9BYJ0 223 aa18.62■□□□□ 0.57
HMG20B-212ENST00000487894 GPR62Q9BZJ7 368 aa18.62■□□□□ 0.57
HMG20B-212ENST00000487894 LRRC27Q9C0I9 530 aa18.62■□□□□ 0.57
HMG20B-212ENST00000487894 IKZF4Q9H2S9 585 aa18.62■□□□□ 0.57
HMG20B-212ENST00000487894 GOLGA2P5Q9HBQ8 144 aa18.62■□□□□ 0.57
HMG20B-212ENST00000487894 PANK4Q9NVE7 773 aa18.62■□□□□ 0.57
HMG20B-212ENST00000487894 DENND4AQ7Z401 1863 aa18.62■□□□□ 0.57
HMG20B-212ENST00000487894 A0A0B4J269 797 aa18.61■□□□□ 0.57
HMG20B-212ENST00000487894 TISP43B9A030 160 aa18.61■□□□□ 0.57
HMG20B-212ENST00000487894 ANKRD63C9JTQ0 380 aa18.61■□□□□ 0.57
HMG20B-212ENST00000487894 LILRB3O75022 631 aa18.61■□□□□ 0.57
HMG20B-212ENST00000487894 CLASP2O75122 1294 aaKnown RBP18.61■□□□□ 0.57
HMG20B-212ENST00000487894 CXCL8P10145 99 aa18.61■□□□□ 0.57
HMG20B-212ENST00000487894 MYBP10242 640 aa18.61■□□□□ 0.57
HMG20B-212ENST00000487894 IL9P15248 144 aa18.61■□□□□ 0.57
HMG20B-212ENST00000487894 KCNE1P15382 129 aa18.61■□□□□ 0.57
HMG20B-212ENST00000487894 TNFSF9P41273 254 aa18.61■□□□□ 0.57
HMG20B-212ENST00000487894 SOX4Q06945 474 aaPredicted RBP18.61■□□□□ 0.57
HMG20B-212ENST00000487894 SLC10A6Q3KNW5 377 aa18.61■□□□□ 0.57
HMG20B-212ENST00000487894 HERC4Q5GLZ8 1057 aaPredicted RBP18.61■□□□□ 0.57
HMG20B-212ENST00000487894 ZBTB41Q5SVQ8 909 aa18.61■□□□□ 0.57
HMG20B-212ENST00000487894 CNNM4Q6P4Q7 775 aa18.61■□□□□ 0.57
HMG20B-212ENST00000487894 CCDC65Q8IXS2 484 aa18.61■□□□□ 0.57
HMG20B-212ENST00000487894 HASPINQ8TF76 798 aa18.61■□□□□ 0.57
HMG20B-212ENST00000487894 CD207Q9UJ71 328 aa18.61■□□□□ 0.57
HMG20B-212ENST00000487894 KCNH3Q9ULD8 1083 aa18.61■□□□□ 0.57
HMG20B-212ENST00000487894 GRXCR2A6NFK2 248 aa18.6■□□□□ 0.57
HMG20B-212ENST00000487894 OGTO15294 1046 aa18.6■□□□□ 0.57
HMG20B-212ENST00000487894 GCNT3O95395 438 aa18.6■□□□□ 0.57
HMG20B-212ENST00000487894 URODP06132 367 aa18.6■□□□□ 0.57
HMG20B-212ENST00000487894 PFKFB1P16118 471 aa18.6■□□□□ 0.57
HMG20B-212ENST00000487894 CMA1P23946 247 aa18.6■□□□□ 0.57
HMG20B-212ENST00000487894 GLUD2P49448 558 aa18.6■□□□□ 0.57
HMG20B-212ENST00000487894 AMPD3Q01432 767 aa18.6■□□□□ 0.57
HMG20B-212ENST00000487894 KCNA1Q09470 495 aa18.6■□□□□ 0.57
HMG20B-212ENST00000487894 PUS10Q3MIT2 529 aaKnown RBP18.6■□□□□ 0.57
HMG20B-212ENST00000487894 L1TD1Q5T7N2 865 aaKnown RBP18.6■□□□□ 0.57
HMG20B-212ENST00000487894 ADALQ6DHV7 355 aa18.6■□□□□ 0.57
HMG20B-212ENST00000487894 LLGL2Q6P1M3 1020 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms