RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 BARHL2Q9NY43 387 aa6.64□□□□□ -1.35
CSDE1-207ENST00000483407 ST3GAL5Q9UNP4 418 aa6.64□□□□□ -1.35
CSDE1-207ENST00000483407 LZTS1Q9Y250 596 aa6.64□□□□□ -1.35
CSDE1-207ENST00000483407 NOC2LQ9Y3T9 749 aaKnown RBP6.64□□□□□ -1.35
CSDE1-207ENST00000483407 CNTNAP5Q8WYK1 1306 aa6.64□□□□□ -1.35
CSDE1-207ENST00000483407 CCDC196A0A1B0GTZ2 297 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 GOLGA8AA7E2F4 631 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 GOLGA8BA8MQT2 603 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 IPO5O00410 1097 aaKnown RBP6.63□□□□□ -1.35
CSDE1-207ENST00000483407 MAGEB2O15479 319 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 MGEA5O60502 916 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 CCNE2O96020 404 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 ACPPP15309 386 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 ZSCAN20P17040 1043 aaPredicted RBP6.63□□□□□ -1.35
CSDE1-207ENST00000483407 HOXB8P17481 243 aaPredicted RBP6.63□□□□□ -1.35
CSDE1-207ENST00000483407 TMOD1P28289 359 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 PPM1AP35813 382 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 TTC3P53804 2025 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 RCAN1P53805 252 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 FAM189BP81408 668 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 KRT17Q04695 432 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 SIGLEC14Q08ET2 396 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 BMS1Q14692 1282 aaKnown RBP6.63□□□□□ -1.35
CSDE1-207ENST00000483407 PCSK7Q16549 785 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 DUSP6Q16828 381 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 KIZQ2M2Z5 673 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 RALGAPA2Q2PPJ7 1873 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 FAM102BQ5T8I3 360 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 JAKMIP3Q5VZ66 844 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 PLPP4Q5VZY2 271 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 ZNF746Q6NUN9 644 aaPredicted RBP6.63□□□□□ -1.35
CSDE1-207ENST00000483407 SWSAP1Q6NVH7 229 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 DTHD1Q6ZMT9 781 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 TRMT1LQ7Z2T5 733 aaKnown RBP6.63□□□□□ -1.35
CSDE1-207ENST00000483407 FAM228AQ86W67 206 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 CCDC60Q8IWA6 550 aaPredicted RBP6.63□□□□□ -1.35
CSDE1-207ENST00000483407 SMAP1Q8IYB5 467 aaPredicted RBP6.63□□□□□ -1.35
CSDE1-207ENST00000483407 LRRC43Q8N309 656 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 FBXL6Q8N531 539 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 CCDC12Q8WUD4 166 aaPredicted RBP6.63□□□□□ -1.35
CSDE1-207ENST00000483407 TMEM40Q8WWA1 233 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 SUSD6Q92537 303 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 MRPS27Q92552 414 aaKnown RBP6.63□□□□□ -1.35
CSDE1-207ENST00000483407 NXPE3Q969Y0 559 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 FAM167AQ96KS9 214 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 SPACA7Q96KW9 195 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 NSUN5Q96P11 429 aaKnown RBP6.63□□□□□ -1.35
CSDE1-207ENST00000483407 PPP1R16BQ96T49 567 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 TCF25Q9BQ70 676 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 ZNF577Q9BSK1 485 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 TMEM117Q9H0C3 514 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 IRF2BPLQ9H1B7 796 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 NGRNQ9NPE2 291 aaKnown RBP6.63□□□□□ -1.35
CSDE1-207ENST00000483407 ENTPD7Q9NQZ7 604 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 TBC1D22BQ9NU19 505 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 NXF1Q9UBU9 619 aaKnown RBP6.63□□□□□ -1.35
CSDE1-207ENST00000483407 NAP1L2Q9ULW6 460 aaPredicted RBP6.63□□□□□ -1.35
CSDE1-207ENST00000483407 SAMM50Q9Y512 469 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 PCDHGC5Q9Y5F6 944 aa6.63□□□□□ -1.35
CSDE1-207ENST00000483407 KLF18A0A0U1RQI7 1052 aa6.62□□□□□ -1.35
CSDE1-207ENST00000483407 FAM86B1E9PN63 330 aa6.62□□□□□ -1.35
CSDE1-207ENST00000483407 FSCN2O14926 492 aa6.62□□□□□ -1.35
CSDE1-207ENST00000483407 GPR32O75388 356 aa6.62□□□□□ -1.35
CSDE1-207ENST00000483407 C22orf31O95567 290 aa6.62□□□□□ -1.35
CSDE1-207ENST00000483407 VTNP04004 478 aa6.62□□□□□ -1.35
CSDE1-207ENST00000483407 CYP3A4P08684 503 aa6.62□□□□□ -1.35
CSDE1-207ENST00000483407 HMGB1P09429 215 aaKnown RBP6.62□□□□□ -1.35
CSDE1-207ENST00000483407 FAM86B2P0C5J1 330 aa6.62□□□□□ -1.35
CSDE1-207ENST00000483407 FGFR1P11362 822 aa6.62□□□□□ -1.35
CSDE1-207ENST00000483407 ITPKAP23677 461 aa6.62□□□□□ -1.35
CSDE1-207ENST00000483407 GNA11P29992 359 aa6.62□□□□□ -1.35
CSDE1-207ENST00000483407 TECP42680 631 aa6.62□□□□□ -1.35
CSDE1-207ENST00000483407 GRIA4P48058 902 aa6.62□□□□□ -1.35
CSDE1-207ENST00000483407 ERVFC1P60507 584 aa6.62□□□□□ -1.35
CSDE1-207ENST00000483407 KRT32Q14532 448 aa6.62□□□□□ -1.35
CSDE1-207ENST00000483407 ZNF468Q5VIY5 522 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-207ENST00000483407 CES5AQ6NT32 575 aa6.62□□□□□ -1.35
CSDE1-207ENST00000483407 ANKRD54Q6NXT1 300 aa6.62□□□□□ -1.35
CSDE1-207ENST00000483407 KCNT2Q6UVM3 1135 aa6.62□□□□□ -1.35
CSDE1-207ENST00000483407 TMEM184AQ6ZMB5 413 aa6.62□□□□□ -1.35
CSDE1-207ENST00000483407 SYT9Q86SS6 491 aa6.62□□□□□ -1.35
CSDE1-207ENST00000483407 PRSS33Q8NF86 280 aa6.62□□□□□ -1.35
CSDE1-207ENST00000483407 RASGRP4Q8TDF6 673 aa6.62□□□□□ -1.35
CSDE1-207ENST00000483407 CASP10Q92851 521 aa6.62□□□□□ -1.35
CSDE1-207ENST00000483407 TCEANC2Q96MN5 208 aa6.62□□□□□ -1.35
CSDE1-207ENST00000483407 ZNF558Q96NG5 402 aa6.62□□□□□ -1.35
CSDE1-207ENST00000483407 SCLT1Q96NL6 688 aa6.62□□□□□ -1.35
CSDE1-207ENST00000483407 CWH43Q9H720 699 aa6.62□□□□□ -1.35
CSDE1-207ENST00000483407 C6orf50Q9HD87 102 aa6.62□□□□□ -1.35
CSDE1-207ENST00000483407 AVENQ9NQS1 362 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-207ENST00000483407 GABBR1Q9UBS5 961 aa6.62□□□□□ -1.35
CSDE1-207ENST00000483407 AKT3Q9Y243 479 aa6.62□□□□□ -1.35
CSDE1-207ENST00000483407 INPP5FQ9Y2H2 1132 aa6.62□□□□□ -1.35
CSDE1-207ENST00000483407 PCDHA10Q9Y5I2 948 aa6.62□□□□□ -1.35
CSDE1-207ENST00000483407 MYO7AQ13402 2215 aa6.61□□□□□ -1.35
CSDE1-207ENST00000483407 IGLV3-22A0A075B6J6 115 aa6.61□□□□□ -1.35
CSDE1-207ENST00000483407 ESYT2A0FGR8 921 aa6.61□□□□□ -1.35
CSDE1-207ENST00000483407 WDR64B1ANS9 1081 aa6.61□□□□□ -1.35
CSDE1-207ENST00000483407 C2CD2LO14523 706 aa6.61□□□□□ -1.35
CSDE1-207ENST00000483407 DHX15O43143 795 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms