RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 PDZD4Q76G19 769 aaPredicted RBP7.3□□□□□ -1.24
SF3B1-210ENST00000482158 CCDC146Q8IYE0 955 aa7.3□□□□□ -1.24
SF3B1-210ENST00000482158 FAM43AQ8N2R8 423 aa7.3□□□□□ -1.24
SF3B1-210ENST00000482158 SLC35B2Q8TB61 432 aa7.3□□□□□ -1.24
SF3B1-210ENST00000482158 KLHDC4Q8TBB5 520 aa7.3□□□□□ -1.24
SF3B1-210ENST00000482158 MYOCQ99972 504 aa7.3□□□□□ -1.24
SF3B1-210ENST00000482158 B3GNT5Q9BYG0 378 aa7.3□□□□□ -1.24
SF3B1-210ENST00000482158 PARD6AQ9NPB6 346 aa7.3□□□□□ -1.24
SF3B1-210ENST00000482158 KMT5AQ9NQR1 393 aa7.3□□□□□ -1.24
SF3B1-210ENST00000482158 TMEM140Q9NV12 185 aa7.3□□□□□ -1.24
SF3B1-210ENST00000482158 STXBP5LQ9Y2K9 1186 aa7.3□□□□□ -1.24
SF3B1-210ENST00000482158 CXorf49A8MYA2 514 aaPredicted RBP7.29□□□□□ -1.24
SF3B1-210ENST00000482158 NT5C1B-RDH14C9J2C7 533 aa7.29□□□□□ -1.24
SF3B1-210ENST00000482158 TPP1O14773 563 aa7.29□□□□□ -1.24
SF3B1-210ENST00000482158 GPR42O15529 346 aa7.29□□□□□ -1.24
SF3B1-210ENST00000482158 MAP4K4O95819 1239 aaPredicted RBP7.29□□□□□ -1.24
SF3B1-210ENST00000482158 PLATP00750 562 aa7.29□□□□□ -1.24
SF3B1-210ENST00000482158 HRGP04196 525 aa7.29□□□□□ -1.24
SF3B1-210ENST00000482158 MALP21145 153 aa7.29□□□□□ -1.24
SF3B1-210ENST00000482158 KRTAP19-4Q3LI73 84 aa7.29□□□□□ -1.24
SF3B1-210ENST00000482158 THEMIS2Q5TEJ8 643 aa7.29□□□□□ -1.24
SF3B1-210ENST00000482158 TCTN3Q6NUS6 607 aa7.29□□□□□ -1.24
SF3B1-210ENST00000482158 SWSAP1Q6NVH7 229 aa7.29□□□□□ -1.24
SF3B1-210ENST00000482158 FAM156AQ8NDB6 213 aa7.29□□□□□ -1.24
SF3B1-210ENST00000482158 TMEM176AQ96HP8 235 aa7.29□□□□□ -1.24
SF3B1-210ENST00000482158 ZNF512Q96ME7 567 aaPredicted RBP7.29□□□□□ -1.24
SF3B1-210ENST00000482158 SARGQ9BW04 601 aa7.29□□□□□ -1.24
SF3B1-210ENST00000482158 LSM14BQ9BX40 385 aaKnown RBP7.29□□□□□ -1.24
SF3B1-210ENST00000482158 ZCCHC4Q9H5U6 513 aa7.29□□□□□ -1.24
SF3B1-210ENST00000482158 PLA2G3Q9NZ20 509 aa7.29□□□□□ -1.24
SF3B1-210ENST00000482158 L1RE1Q9UN81 338 aa7.29□□□□□ -1.24
SF3B1-210ENST00000482158 POLHQ9Y253 713 aa7.29□□□□□ -1.24
SF3B1-210ENST00000482158 PNPLA7Q6ZV29 1317 aa7.28□□□□□ -1.24
SF3B1-210ENST00000482158 A0A088AWK7 358 aa7.28□□□□□ -1.24
SF3B1-210ENST00000482158 FOXS1O43638 330 aa7.28□□□□□ -1.24
SF3B1-210ENST00000482158 ZBED1O96006 694 aa7.28□□□□□ -1.24
SF3B1-210ENST00000482158 TRIM27P14373 513 aa7.28□□□□□ -1.24
SF3B1-210ENST00000482158 RHCEP18577 417 aa7.28□□□□□ -1.24
SF3B1-210ENST00000482158 RPS19P39019 145 aaKnown RBP7.28□□□□□ -1.24
SF3B1-210ENST00000482158 IL12RB1P42701 662 aa7.28□□□□□ -1.24
SF3B1-210ENST00000482158 RHDQ02161 417 aa7.28□□□□□ -1.24
SF3B1-210ENST00000482158 GRM7Q14831 915 aa7.28□□□□□ -1.24
SF3B1-210ENST00000482158 ANO6Q4KMQ2 910 aa7.28□□□□□ -1.24
SF3B1-210ENST00000482158 OTUD7BQ6GQQ9 843 aa7.28□□□□□ -1.24
SF3B1-210ENST00000482158 HEATR3Q7Z4Q2 680 aa7.28□□□□□ -1.24
SF3B1-210ENST00000482158 SRGAP1Q7Z6B7 1085 aa7.28□□□□□ -1.24
SF3B1-210ENST00000482158 XYLT1Q86Y38 959 aa7.28□□□□□ -1.24
SF3B1-210ENST00000482158 PLXDC1Q8IUK5 500 aa7.28□□□□□ -1.24
SF3B1-210ENST00000482158 FUKQ8N0W3 1084 aa7.28□□□□□ -1.24
SF3B1-210ENST00000482158 MAN1C1Q9NR34 630 aa7.28□□□□□ -1.24
SF3B1-210ENST00000482158 RUVBL1Q9Y265 456 aaKnown RBP7.28□□□□□ -1.24
SF3B1-210ENST00000482158 FAM227AF5H4B4 570 aa7.27□□□□□ -1.25
SF3B1-210ENST00000482158 KRT18P05783 430 aaKnown RBP7.27□□□□□ -1.25
SF3B1-210ENST00000482158 TYRP14679 529 aa7.27□□□□□ -1.25
SF3B1-210ENST00000482158 JAG1P78504 1218 aa7.27□□□□□ -1.25
SF3B1-210ENST00000482158 FOXL1Q12952 345 aa7.27□□□□□ -1.25
SF3B1-210ENST00000482158 KSR2Q6VAB6 950 aa7.27□□□□□ -1.25
SF3B1-210ENST00000482158 SEM1Q6ZVN7 128 aa7.27□□□□□ -1.25
SF3B1-210ENST00000482158 GPRIN1Q7Z2K8 1008 aa7.27□□□□□ -1.25
SF3B1-210ENST00000482158 LIMS2Q7Z4I7 341 aa7.27□□□□□ -1.25
SF3B1-210ENST00000482158 ARL8AQ96BM9 186 aa7.27□□□□□ -1.25
SF3B1-210ENST00000482158 CDK5RAP3Q96JB5 506 aa7.27□□□□□ -1.25
SF3B1-210ENST00000482158 NT5C1BQ96P26 610 aa7.27□□□□□ -1.25
SF3B1-210ENST00000482158 OR14A2Q96R54 314 aa7.27□□□□□ -1.25
SF3B1-210ENST00000482158 CHST12Q9NRB3 414 aa7.27□□□□□ -1.25
SF3B1-210ENST00000482158 LMBRD1Q9NUN5 540 aa7.27□□□□□ -1.25
SF3B1-210ENST00000482158 MOCS1Q9NZB8 636 aa7.27□□□□□ -1.25
SF3B1-210ENST00000482158 SH3BP1Q9Y3L3 701 aa7.27□□□□□ -1.25
SF3B1-210ENST00000482158 SLC30A1Q9Y6M5 507 aa7.27□□□□□ -1.25
SF3B1-210ENST00000482158 NPEPPSL1A6NEC2 478 aa7.26□□□□□ -1.25
SF3B1-210ENST00000482158 F2RL2O00254 374 aa7.26□□□□□ -1.25
SF3B1-210ENST00000482158 RAD17O75943 681 aa7.26□□□□□ -1.25
SF3B1-210ENST00000482158 SBK3P0C264 359 aa7.26□□□□□ -1.25
SF3B1-210ENST00000482158 RAP2AP10114 183 aa7.26□□□□□ -1.25
SF3B1-210ENST00000482158 RAB1AP62820 205 aa7.26□□□□□ -1.25
SF3B1-210ENST00000482158 PURAQ00577 322 aaKnown RBP7.26□□□□□ -1.25
SF3B1-210ENST00000482158 PLS1Q14651 629 aa7.26□□□□□ -1.25
SF3B1-210ENST00000482158 FKBP15Q5T1M5 1219 aa7.26□□□□□ -1.25
SF3B1-210ENST00000482158 GADL1Q6ZQY3 521 aa7.26□□□□□ -1.25
SF3B1-210ENST00000482158 GIMAP8Q8ND71 665 aaPredicted RBP7.26□□□□□ -1.25
SF3B1-210ENST00000482158 RBM15Q96T37 977 aaKnown RBP eCLIP7.26□□□□□ -1.25
SF3B1-210ENST00000482158 MRI1Q9BV20 369 aa7.26□□□□□ -1.25
SF3B1-210ENST00000482158 BHMT2Q9H2M3 363 aa7.26□□□□□ -1.25
SF3B1-210ENST00000482158 FAM204AQ9H8W3 233 aa7.26□□□□□ -1.25
SF3B1-210ENST00000482158 ARMT1Q9H993 441 aa7.26□□□□□ -1.25
SF3B1-210ENST00000482158 ATP6V0A4Q9HBG4 840 aa7.26□□□□□ -1.25
SF3B1-210ENST00000482158 ABCF2Q9UG63 623 aa7.26□□□□□ -1.25
SF3B1-210ENST00000482158 ZFR2Q9UPR6 939 aaKnown RBP7.26□□□□□ -1.25
SF3B1-210ENST00000482158 ZNF536O15090 1300 aa7.26□□□□□ -1.25
SF3B1-210ENST00000482158 APAF1O14727 1248 aa7.25□□□□□ -1.25
SF3B1-210ENST00000482158 ARIH2O95376 493 aa7.25□□□□□ -1.25
SF3B1-210ENST00000482158 MYL1P05976 194 aa7.25□□□□□ -1.25
SF3B1-210ENST00000482158 SLC6A4P31645 630 aa7.25□□□□□ -1.25
SF3B1-210ENST00000482158 MSX2P35548 267 aaPredicted RBP7.25□□□□□ -1.25
SF3B1-210ENST00000482158 BMT2Q1RMZ1 405 aa7.25□□□□□ -1.25
SF3B1-210ENST00000482158 FLYWCH1Q4VC44 716 aa7.25□□□□□ -1.25
SF3B1-210ENST00000482158 DACT2Q5SW24 774 aa7.25□□□□□ -1.25
SF3B1-210ENST00000482158 UBXN11Q5T124 520 aa7.25□□□□□ -1.25
SF3B1-210ENST00000482158 DOK3Q7L591 496 aa7.25□□□□□ -1.25
SF3B1-210ENST00000482158 DAAM2Q86T65 1068 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms