RNA–Protein interactions for RNA: ENST00000481077.6

CNKSR1-206, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 3

Gene CNKSR1, Length 865 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-206ENST00000481077 ACOT2P49753 483 aa16.99■□□□□ 0.31
CNKSR1-206ENST00000481077 SNRPFP62306 86 aaKnown RBP16.99■□□□□ 0.31
CNKSR1-206ENST00000481077 KRT17Q04695 432 aa16.99■□□□□ 0.31
CNKSR1-206ENST00000481077 DSC1Q08554 894 aa16.99■□□□□ 0.31
CNKSR1-206ENST00000481077 ADGRE1Q14246 886 aa16.99■□□□□ 0.31
CNKSR1-206ENST00000481077 KNOP1Q1ED39 458 aaKnown RBP16.99■□□□□ 0.31
CNKSR1-206ENST00000481077 SLC10A6Q3KNW5 377 aa16.99■□□□□ 0.31
CNKSR1-206ENST00000481077 XKR4Q5GH76 650 aa16.99■□□□□ 0.31
CNKSR1-206ENST00000481077 GLRA4Q5JXX5 417 aa16.99■□□□□ 0.31
CNKSR1-206ENST00000481077 ZBTB41Q5SVQ8 909 aa16.99■□□□□ 0.31
CNKSR1-206ENST00000481077 ALKAL1Q6UXT8 129 aa16.99■□□□□ 0.31
CNKSR1-206ENST00000481077 COLGALT2Q8IYK4 626 aa16.99■□□□□ 0.31
CNKSR1-206ENST00000481077 SLC39A11Q8N1S5 342 aa16.99■□□□□ 0.31
CNKSR1-206ENST00000481077 CXCL16Q9H2A7 254 aa16.99■□□□□ 0.31
CNKSR1-206ENST00000481077 RPF1Q9H9Y2 349 aaKnown RBP16.99■□□□□ 0.31
CNKSR1-206ENST00000481077 ALG13Q9NP73 1137 aaKnown RBP16.99■□□□□ 0.31
CNKSR1-206ENST00000481077 LMBRD1Q9NUN5 540 aa16.99■□□□□ 0.31
CNKSR1-206ENST00000481077 CNTN3Q9P232 1028 aa16.99■□□□□ 0.31
CNKSR1-206ENST00000481077 CPSF3Q9UKF6 684 aaKnown RBP16.99■□□□□ 0.31
CNKSR1-206ENST00000481077 FAN1Q9Y2M0 1017 aa16.99■□□□□ 0.31
CNKSR1-206ENST00000481077 PCDHA5Q9Y5H7 936 aa16.99■□□□□ 0.31
CNKSR1-206ENST00000481077 TDRD15B5MCY1 1934 aaKnown RBP16.98■□□□□ 0.31
CNKSR1-206ENST00000481077 SMIM28A0A1B0GU29 152 aa16.98■□□□□ 0.31
CNKSR1-206ENST00000481077 NT5C1B-RDH14C9J2C7 533 aa16.98■□□□□ 0.31
CNKSR1-206ENST00000481077 KIAA0391O15091 583 aaKnown RBP16.98■□□□□ 0.31
CNKSR1-206ENST00000481077 GRM6O15303 877 aa16.98■□□□□ 0.31
CNKSR1-206ENST00000481077 LDHAP00338 332 aaKnown RBP16.98■□□□□ 0.31
CNKSR1-206ENST00000481077 KCNE1P15382 129 aa16.98■□□□□ 0.31
CNKSR1-206ENST00000481077 OR1G1P47890 313 aa16.98■□□□□ 0.31
CNKSR1-206ENST00000481077 SLC11A1P49279 550 aa16.98■□□□□ 0.31
CNKSR1-206ENST00000481077 PLCB3Q01970 1234 aa16.98■□□□□ 0.31
CNKSR1-206ENST00000481077 UBE3AQ05086 875 aa16.98■□□□□ 0.31
CNKSR1-206ENST00000481077 PPP2R3AQ06190 1150 aa16.98■□□□□ 0.31
CNKSR1-206ENST00000481077 TUSC3Q13454 348 aa16.98■□□□□ 0.31
CNKSR1-206ENST00000481077 ENOX2Q16206 610 aaKnown RBP16.98■□□□□ 0.31
CNKSR1-206ENST00000481077 GOLGA5Q8TBA6 731 aa16.98■□□□□ 0.31
CNKSR1-206ENST00000481077 ERCC4Q92889 916 aaPredicted RBP16.98■□□□□ 0.31
CNKSR1-206ENST00000481077 TMEM169Q96HH4 297 aa16.98■□□□□ 0.31
CNKSR1-206ENST00000481077 PPP1R10Q96QC0 940 aaKnown RBP16.98■□□□□ 0.31
CNKSR1-206ENST00000481077 CBWD1Q9BRT8 395 aa16.98■□□□□ 0.31
CNKSR1-206ENST00000481077 FAM213AQ9BRX8 229 aa16.98■□□□□ 0.31
CNKSR1-206ENST00000481077 LMAN2LQ9H0V9 348 aa16.98■□□□□ 0.31
CNKSR1-206ENST00000481077 SLC38A7Q9NVC3 462 aa16.98■□□□□ 0.31
CNKSR1-206ENST00000481077 LMCD1Q9NZU5 365 aa16.98■□□□□ 0.31
CNKSR1-206ENST00000481077 CGNQ9P2M7 1197 aaKnown RBP16.98■□□□□ 0.31
CNKSR1-206ENST00000481077 PUF60Q9UHX1 559 aaKnown RBP16.98■□□□□ 0.31
CNKSR1-206ENST00000481077 TTC26A0AVF1 554 aa16.97■□□□□ 0.31
CNKSR1-206ENST00000481077 NRP1O14786 923 aa16.97■□□□□ 0.31
CNKSR1-206ENST00000481077 TGFB1I1O43294 461 aa16.97■□□□□ 0.31
CNKSR1-206ENST00000481077 POU3F3P20264 500 aaPredicted RBP16.97■□□□□ 0.31
CNKSR1-206ENST00000481077 POU5F1Q01860 360 aaKnown RBP16.97■□□□□ 0.31
CNKSR1-206ENST00000481077 CD302Q8IX05 232 aa16.97■□□□□ 0.31
CNKSR1-206ENST00000481077 SPATA20Q8TB22 786 aa16.97■□□□□ 0.31
CNKSR1-206ENST00000481077 SPPL3Q8TCT6 385 aa16.97■□□□□ 0.31
CNKSR1-206ENST00000481077 NOC3LQ8WTT2 800 aaKnown RBP16.97■□□□□ 0.31
CNKSR1-206ENST00000481077 MRPL38Q96DV4 380 aaKnown RBP16.97■□□□□ 0.31
CNKSR1-206ENST00000481077 FAM212AQ96EL1 285 aa16.97■□□□□ 0.31
CNKSR1-206ENST00000481077 SAAL1Q96ER3 474 aa16.97■□□□□ 0.31
CNKSR1-206ENST00000481077 IGSF21Q96ID5 467 aa16.97■□□□□ 0.31
CNKSR1-206ENST00000481077 COLEC11Q9BWP8 271 aa16.97■□□□□ 0.31
CNKSR1-206ENST00000481077 GTPBP4Q9BZE4 634 aaKnown RBP16.97■□□□□ 0.31
CNKSR1-206ENST00000481077 PCIF1Q9H4Z3 704 aa16.97■□□□□ 0.31
CNKSR1-206ENST00000481077 AGPAT3Q9NRZ7 376 aa16.97■□□□□ 0.31
CNKSR1-206ENST00000481077 LZTS1Q9Y250 596 aa16.97■□□□□ 0.31
CNKSR1-206ENST00000481077 STXBP5LQ9Y2K9 1186 aa16.97■□□□□ 0.31
CNKSR1-206ENST00000481077 MTCH2Q9Y6C9 303 aa16.97■□□□□ 0.31
CNKSR1-206ENST00000481077 CASTOR2A6NHX0 329 aa16.96■□□□□ 0.31
CNKSR1-206ENST00000481077 LACTBL1A8MY62 500 aa16.96■□□□□ 0.31
CNKSR1-206ENST00000481077 MEFVO15553 781 aaPredicted RBP16.96■□□□□ 0.31
CNKSR1-206ENST00000481077 EXTL3O43909 919 aa16.96■□□□□ 0.31
CNKSR1-206ENST00000481077 HSP90AA2PQ14568 343 aaPredicted RBP16.96■□□□□ 0.31
CNKSR1-206ENST00000481077 NAB2Q15742 525 aa16.96■□□□□ 0.31
CNKSR1-206ENST00000481077 ZNF658Q5TYW1 1059 aaPredicted RBP16.96■□□□□ 0.31
CNKSR1-206ENST00000481077 TMEM173Q86WV6 379 aaPredicted RBP16.96■□□□□ 0.31
CNKSR1-206ENST00000481077 GPD1LQ8N335 351 aa16.96■□□□□ 0.31
CNKSR1-206ENST00000481077 GUF1Q8N442 669 aaKnown RBP16.96■□□□□ 0.31
CNKSR1-206ENST00000481077 POF1BQ8WVV4 589 aa16.96■□□□□ 0.31
CNKSR1-206ENST00000481077 ZMAT2Q96NC0 199 aaKnown RBP16.96■□□□□ 0.31
CNKSR1-206ENST00000481077 TSPAN18Q96SJ8 248 aa16.96■□□□□ 0.31
CNKSR1-206ENST00000481077 KIAA1586Q9HCI6 787 aa16.96■□□□□ 0.31
CNKSR1-206ENST00000481077 HSPBP1Q9NZL4 362 aa16.96■□□□□ 0.31
CNKSR1-206ENST00000481077 MAPK8IP1Q9UQF2 711 aa16.96■□□□□ 0.31
CNKSR1-206ENST00000481077 PRG3Q9Y2Y8 225 aaPredicted RBP16.96■□□□□ 0.31
CNKSR1-206ENST00000481077 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.96■□□□□ 0.31
CNKSR1-206ENST00000481077 CITO14578 2027 aa16.96■□□□□ 0.3
CNKSR1-206ENST00000481077 GOLGA8IPA6NC78 632 aa16.95■□□□□ 0.3
CNKSR1-206ENST00000481077 GOLGA8JA6NMD2 632 aa16.95■□□□□ 0.3
CNKSR1-206ENST00000481077 CLIC2O15247 247 aa16.95■□□□□ 0.3
CNKSR1-206ENST00000481077 CSPG5O95196 566 aa16.95■□□□□ 0.3
CNKSR1-206ENST00000481077 ADRB2P07550 413 aa16.95■□□□□ 0.3
CNKSR1-206ENST00000481077 CYP2J2P51589 502 aa16.95■□□□□ 0.3
CNKSR1-206ENST00000481077 CAMK4Q16566 473 aa16.95■□□□□ 0.3
CNKSR1-206ENST00000481077 CRELD2Q6UXH1 353 aaPredicted RBP16.95■□□□□ 0.3
CNKSR1-206ENST00000481077 MICALL1Q8N3F8 863 aa16.95■□□□□ 0.3
CNKSR1-206ENST00000481077 KIF12Q96FN5 646 aa16.95■□□□□ 0.3
CNKSR1-206ENST00000481077 UROC1Q96N76 676 aa16.95■□□□□ 0.3
CNKSR1-206ENST00000481077 KCTD10Q9H3F6 313 aa16.95■□□□□ 0.3
CNKSR1-206ENST00000481077 RBAKQ9NYW8 714 aaPredicted RBP16.95■□□□□ 0.3
CNKSR1-206ENST00000481077 STK39Q9UEW8 545 aa16.95■□□□□ 0.3
CNKSR1-206ENST00000481077 PLXNA4Q9HCM2 1894 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms