RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 SPOUT1Q5T280 376 aaKnown RBP21.5■■□□□ 1.03
LIME1-205ENST00000480139 CD302Q8IX05 232 aa21.5■■□□□ 1.03
LIME1-205ENST00000480139 FBXO22Q8NEZ5 403 aa21.5■■□□□ 1.03
LIME1-205ENST00000480139 ZNF558Q96NG5 402 aa21.5■■□□□ 1.03
LIME1-205ENST00000480139 C11orf84Q9BUA3 381 aaPredicted RBP21.5■■□□□ 1.03
LIME1-205ENST00000480139 NRDE2Q9H7Z3 1164 aa21.5■■□□□ 1.03
LIME1-205ENST00000480139 KIAA1586Q9HCI6 787 aa21.5■■□□□ 1.03
LIME1-205ENST00000480139 PCDHB12Q9Y5F1 795 aa21.5■■□□□ 1.03
LIME1-205ENST00000480139 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.5■■□□□ 1.03
LIME1-205ENST00000480139 EXTL3O43909 919 aa21.49■■□□□ 1.03
LIME1-205ENST00000480139 DDHD2O94830 711 aa21.49■■□□□ 1.03
LIME1-205ENST00000480139 CXCL8P10145 99 aa21.49■■□□□ 1.03
LIME1-205ENST00000480139 PPM1AP35813 382 aa21.49■■□□□ 1.03
LIME1-205ENST00000480139 PPP1R2P41236 205 aa21.49■■□□□ 1.03
LIME1-205ENST00000480139 ACOT2P49753 483 aa21.49■■□□□ 1.03
LIME1-205ENST00000480139 MORC3Q14149 939 aa21.49■■□□□ 1.03
LIME1-205ENST00000480139 KCNT2Q6UVM3 1135 aa21.49■■□□□ 1.03
LIME1-205ENST00000480139 CRELD2Q6UXH1 353 aaPredicted RBP21.49■■□□□ 1.03
LIME1-205ENST00000480139 ZNF280BQ86YH2 543 aa21.49■■□□□ 1.03
LIME1-205ENST00000480139 SLC9A9Q8IVB4 645 aa21.49■■□□□ 1.03
LIME1-205ENST00000480139 GPD1LQ8N335 351 aa21.49■■□□□ 1.03
LIME1-205ENST00000480139 ARNTL2Q8WYA1 636 aa21.49■■□□□ 1.03
LIME1-205ENST00000480139 FAM193BQ96PV7 902 aaPredicted RBP21.49■■□□□ 1.03
LIME1-205ENST00000480139 PPP1R10Q96QC0 940 aaKnown RBP21.49■■□□□ 1.03
LIME1-205ENST00000480139 RPF1Q9H9Y2 349 aaKnown RBP21.49■■□□□ 1.03
LIME1-205ENST00000480139 HSPBP1Q9NZL4 362 aa21.49■■□□□ 1.03
LIME1-205ENST00000480139 PLAGL2Q9UPG8 496 aa21.49■■□□□ 1.03
LIME1-205ENST00000480139 TRAF3IP3Q9Y228 551 aa21.49■■□□□ 1.03
LIME1-205ENST00000480139 CHD7Q9P2D1 2997 aa21.48■■□□□ 1.03
LIME1-205ENST00000480139 SMIM28A0A1B0GU29 152 aa21.48■■□□□ 1.03
LIME1-205ENST00000480139 H3BNC9 293 aa21.48■■□□□ 1.03
LIME1-205ENST00000480139 B4GALT3O60512 393 aa21.48■■□□□ 1.03
LIME1-205ENST00000480139 ZC3H11AO75152 810 aaKnown RBP eCLIP21.48■■□□□ 1.03
LIME1-205ENST00000480139 PTMSP20962 102 aa21.48■■□□□ 1.03
LIME1-205ENST00000480139 ALDH7A1P49419 539 aaKnown RBP21.48■■□□□ 1.03
LIME1-205ENST00000480139 BCAR1P56945 870 aa21.48■■□□□ 1.03
LIME1-205ENST00000480139 PPP2R3AQ06190 1150 aa21.48■■□□□ 1.03
LIME1-205ENST00000480139 MYBPC2Q14324 1141 aa21.48■■□□□ 1.03
LIME1-205ENST00000480139 NFIL3Q16649 462 aa21.48■■□□□ 1.03
LIME1-205ENST00000480139 COLGALT2Q8IYK4 626 aa21.48■■□□□ 1.03
LIME1-205ENST00000480139 SMYD4Q8IYR2 804 aaPredicted RBP21.48■■□□□ 1.03
LIME1-205ENST00000480139 DEFB123Q8N688 67 aa21.48■■□□□ 1.03
LIME1-205ENST00000480139 FBXL18Q96ME1 805 aa21.48■■□□□ 1.03
LIME1-205ENST00000480139 CXCL16Q9H2A7 254 aa21.48■■□□□ 1.03
LIME1-205ENST00000480139 CERS4Q9HA82 394 aa21.48■■□□□ 1.03
LIME1-205ENST00000480139 SLC38A7Q9NVC3 462 aa21.48■■□□□ 1.03
LIME1-205ENST00000480139 DNAJB4Q9UDY4 337 aa21.48■■□□□ 1.03
LIME1-205ENST00000480139 MTUS1Q9ULD2 1270 aa21.48■■□□□ 1.03
LIME1-205ENST00000480139 SZT2Q5T011 3432 aa21.48■■□□□ 1.03
LIME1-205ENST00000480139 CALUO43852 315 aaPredicted RBP21.47■■□□□ 1.03
LIME1-205ENST00000480139 GALTP07902 379 aa21.47■■□□□ 1.03
LIME1-205ENST00000480139 PRCPP42785 496 aa21.47■■□□□ 1.03
LIME1-205ENST00000480139 TUSC3Q13454 348 aa21.47■■□□□ 1.03
LIME1-205ENST00000480139 GRIN2CQ14957 1233 aa21.47■■□□□ 1.03
LIME1-205ENST00000480139 ZCWPW2Q504Y3 356 aa21.47■■□□□ 1.03
LIME1-205ENST00000480139 ADSSL1Q8N142 457 aa21.47■■□□□ 1.03
LIME1-205ENST00000480139 SAAL1Q96ER3 474 aa21.47■■□□□ 1.03
LIME1-205ENST00000480139 FAM213AQ9BRX8 229 aa21.47■■□□□ 1.03
LIME1-205ENST00000480139 PCIF1Q9H4Z3 704 aa21.47■■□□□ 1.03
LIME1-205ENST00000480139 ASB7Q9H672 318 aa21.47■■□□□ 1.03
LIME1-205ENST00000480139 MAPK8IP1Q9UQF2 711 aa21.47■■□□□ 1.03
LIME1-205ENST00000480139 PLXNA4Q9HCM2 1894 aa21.47■■□□□ 1.03
LIME1-205ENST00000480139 EPOPA6NHQ4 379 aa21.46■■□□□ 1.03
LIME1-205ENST00000480139 IL18RAPO95256 599 aa21.46■■□□□ 1.03
LIME1-205ENST00000480139 BMP6P22004 513 aa21.46■■□□□ 1.03
LIME1-205ENST00000480139 PLCB3Q01970 1234 aa21.46■■□□□ 1.03
LIME1-205ENST00000480139 STIM1Q13586 685 aa21.46■■□□□ 1.03
LIME1-205ENST00000480139 Q7L0L9 218 aa21.46■■□□□ 1.03
LIME1-205ENST00000480139 BRSK2Q8IWQ3 736 aa21.46■■□□□ 1.03
LIME1-205ENST00000480139 SLC39A11Q8N1S5 342 aa21.46■■□□□ 1.03
LIME1-205ENST00000480139 XXYLT1Q8NBI6 393 aa21.46■■□□□ 1.03
LIME1-205ENST00000480139 UROC1Q96N76 676 aa21.46■■□□□ 1.03
LIME1-205ENST00000480139 ZMAT2Q96NC0 199 aaKnown RBP21.46■■□□□ 1.03
LIME1-205ENST00000480139 DMAC2Q9NW81 257 aa21.46■■□□□ 1.03
LIME1-205ENST00000480139 SPG21Q9NZD8 308 aa21.46■■□□□ 1.03
LIME1-205ENST00000480139 DERAQ9Y315 318 aa21.46■■□□□ 1.03
LIME1-205ENST00000480139 TRANK1O15050 2925 aa21.46■■□□□ 1.03
LIME1-205ENST00000480139 LACTBL1A8MY62 500 aa21.45■■□□□ 1.02
LIME1-205ENST00000480139 CLIC2O15247 247 aa21.45■■□□□ 1.02
LIME1-205ENST00000480139 ALDH2P05091 517 aa21.45■■□□□ 1.02
LIME1-205ENST00000480139 SLC11A1P49279 550 aa21.45■■□□□ 1.02
LIME1-205ENST00000480139 UBE3AQ05086 875 aa21.45■■□□□ 1.02
LIME1-205ENST00000480139 ZBTB6Q15916 424 aa21.45■■□□□ 1.02
LIME1-205ENST00000480139 EDRF1Q3B7T1 1238 aa21.45■■□□□ 1.02
LIME1-205ENST00000480139 GLRA4Q5JXX5 417 aa21.45■■□□□ 1.02
LIME1-205ENST00000480139 CENPPQ6IPU0 288 aa21.45■■□□□ 1.02
LIME1-205ENST00000480139 RBM43Q6ZSC3 357 aaKnown RBP21.45■■□□□ 1.02
LIME1-205ENST00000480139 NT5DC4Q86YG4 428 aa21.45■■□□□ 1.02
LIME1-205ENST00000480139 KLHL23Q8NBE8 558 aa21.45■■□□□ 1.02
LIME1-205ENST00000480139 ZSWIM2Q8NEG5 633 aa21.45■■□□□ 1.02
LIME1-205ENST00000480139 LMAN2LQ9H0V9 348 aa21.45■■□□□ 1.02
LIME1-205ENST00000480139 PRDM12Q9H4Q4 367 aa21.45■■□□□ 1.02
LIME1-205ENST00000480139 MTMR10Q9NXD2 777 aa21.45■■□□□ 1.02
LIME1-205ENST00000480139 RBAKQ9NYW8 714 aaPredicted RBP21.45■■□□□ 1.02
LIME1-205ENST00000480139 LZTS1Q9Y250 596 aa21.45■■□□□ 1.02
LIME1-205ENST00000480139 C2CD2Q9Y426 696 aa21.45■■□□□ 1.02
LIME1-205ENST00000480139 CDH23Q9H251 3354 aa21.45■■□□□ 1.02
LIME1-205ENST00000480139 ZNF233A6NK53 670 aa21.44■■□□□ 1.02
LIME1-205ENST00000480139 BIN1O00499 593 aa21.44■■□□□ 1.02
LIME1-205ENST00000480139 NRP1O14786 923 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms