RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 EML1O00423 815 aa7.37□□□□□ -1.23
VCP-205ENST00000479300 DPYSL4O14531 572 aa7.37□□□□□ -1.23
VCP-205ENST00000479300 ASAP2O43150 1006 aa7.37□□□□□ -1.23
VCP-205ENST00000479300 KINO60870 393 aaKnown RBP7.37□□□□□ -1.23
VCP-205ENST00000479300 LILRB5O75023 590 aa7.37□□□□□ -1.23
VCP-205ENST00000479300 ZMYND10O75800 440 aa7.37□□□□□ -1.23
VCP-205ENST00000479300 RFX1P22670 979 aa7.37□□□□□ -1.23
VCP-205ENST00000479300 MLH1P40692 756 aa7.37□□□□□ -1.23
VCP-205ENST00000479300 OR1G1P47890 313 aa7.37□□□□□ -1.23
VCP-205ENST00000479300 SCNN1GP51170 649 aa7.37□□□□□ -1.23
VCP-205ENST00000479300 FOSBP53539 338 aa7.37□□□□□ -1.23
VCP-205ENST00000479300 TFDP1Q14186 410 aa7.37□□□□□ -1.23
VCP-205ENST00000479300 ZNF528Q3MIS6 628 aa7.37□□□□□ -1.23
VCP-205ENST00000479300 XKR9Q5GH70 373 aa7.37□□□□□ -1.23
VCP-205ENST00000479300 ZC3H14Q6PJT7 736 aaKnown RBP7.37□□□□□ -1.23
VCP-205ENST00000479300 TSSK4Q6SA08 328 aa7.37□□□□□ -1.23
VCP-205ENST00000479300 GLYCTKQ8IVS8 523 aa7.37□□□□□ -1.23
VCP-205ENST00000479300 TPH2Q8IWU9 490 aa7.37□□□□□ -1.23
VCP-205ENST00000479300 ITFG1Q8TB96 612 aa7.37□□□□□ -1.23
VCP-205ENST00000479300 ETNPPLQ8TBG4 499 aa7.37□□□□□ -1.23
VCP-205ENST00000479300 URGCPQ8TCY9 931 aa7.37□□□□□ -1.23
VCP-205ENST00000479300 PSPC1Q8WXF1 523 aaKnown RBP7.37□□□□□ -1.23
VCP-205ENST00000479300 STAMQ92783 540 aa7.37□□□□□ -1.23
VCP-205ENST00000479300 TMEM143Q96AN5 459 aa7.37□□□□□ -1.23
VCP-205ENST00000479300 PGBD4Q96DM1 585 aa7.37□□□□□ -1.23
VCP-205ENST00000479300 ZSCAN31Q96LW9 406 aaPredicted RBP7.37□□□□□ -1.23
VCP-205ENST00000479300 GBP4Q96PP9 640 aa7.37□□□□□ -1.23
VCP-205ENST00000479300 GAD1Q99259 594 aa7.37□□□□□ -1.23
VCP-205ENST00000479300 ZSWIM4Q9H7M6 989 aa7.37□□□□□ -1.23
VCP-205ENST00000479300 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.37□□□□□ -1.23
VCP-205ENST00000479300 PCDHA12Q9UN75 941 aa7.37□□□□□ -1.23
VCP-205ENST00000479300 LIMCH1Q9UPQ0 1083 aa7.37□□□□□ -1.23
VCP-205ENST00000479300 SMG5Q9UPR3 1016 aaKnown RBP7.37□□□□□ -1.23
VCP-205ENST00000479300 KIF3AQ9Y496 699 aa7.37□□□□□ -1.23
VCP-205ENST00000479300 IPPQ9Y573 584 aa7.37□□□□□ -1.23
VCP-205ENST00000479300 COL4A2P08572 1712 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 CNTNAP2Q9UHC6 1331 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 UQCRHLA0A096LP55 91 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 KANSL1LA0AUZ9 987 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 NRG2O14511 850 aaPredicted RBP7.36□□□□□ -1.23
VCP-205ENST00000479300 SPTLC1O15269 473 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 ADAM12O43184 909 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 SLC37A4O43826 429 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 NEMFO60524 1076 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 ERLIN2O94905 339 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 UQCRHP07919 91 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 TDGF1P13385 188 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 ATP2B1P20020 1258 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 FSHRP23945 695 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 IGFBP6P24592 240 aaPredicted RBP7.36□□□□□ -1.23
VCP-205ENST00000479300 TARSP26639 723 aaKnown RBP7.36□□□□□ -1.23
VCP-205ENST00000479300 YWHABP31946 246 aaKnown RBP7.36□□□□□ -1.23
VCP-205ENST00000479300 DDIT3P35638 169 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 TXKP42681 527 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 CSTF1Q05048 431 aaKnown RBP7.36□□□□□ -1.23
VCP-205ENST00000479300 LAMTOR4Q0VGL1 99 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 NPY5RQ15761 445 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 MLF2Q15773 248 aaPredicted RBP7.36□□□□□ -1.23
VCP-205ENST00000479300 AMHR2Q16671 573 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 ME3Q16798 604 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 RTP2Q5QGT7 225 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 SASS6Q6UVJ0 657 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 PRSS55Q6UWB4 352 aaPredicted RBP7.36□□□□□ -1.23
VCP-205ENST00000479300 SRGAP1Q7Z6B7 1085 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 GRASPQ7Z6J2 395 aaPredicted RBP7.36□□□□□ -1.23
VCP-205ENST00000479300 C4orf19Q8IY42 314 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 DIS3L2Q8IYB7 885 aaKnown RBP7.36□□□□□ -1.23
VCP-205ENST00000479300 HACE1Q8IYU2 909 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 ZNF687Q8N1G0 1237 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 ERMNQ8TAM6 284 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 OXER1Q8TDS5 423 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 IPO4Q8TEX9 1081 aaKnown RBP7.36□□□□□ -1.23
VCP-205ENST00000479300 HDAC7Q8WUI4 952 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 PRPF31Q8WWY3 499 aaKnown RBP7.36□□□□□ -1.23
VCP-205ENST00000479300 DYDC2Q96IM9 177 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 C8orf76Q96K31 380 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 FAM193BQ96PV7 902 aaPredicted RBP7.36□□□□□ -1.23
VCP-205ENST00000479300 MTRQ99707 1265 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 PAAF1Q9BRP4 392 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 LXNQ9BS40 222 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 GZF1Q9H116 711 aaPredicted RBP7.36□□□□□ -1.23
VCP-205ENST00000479300 CXCL16Q9H2A7 254 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 EPC1Q9H2F5 836 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 PLEKHA4Q9H4M7 779 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 DHX33Q9H6R0 707 aaKnown RBP7.36□□□□□ -1.23
VCP-205ENST00000479300 KCNMB3Q9NPA1 279 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 LTB4R2Q9NPC1 389 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 SPATA6Q9NWH7 488 aaPredicted RBP7.36□□□□□ -1.23
VCP-205ENST00000479300 ZDHHC7Q9NXF8 308 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 NCDNQ9UBB6 729 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 STK39Q9UEW8 545 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 RALYQ9UKM9 306 aaKnown RBP7.36□□□□□ -1.23
VCP-205ENST00000479300 FBXO4Q9UKT5 387 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 CDH7Q9ULB5 785 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 NOL7Q9UMY1 257 aaKnown RBP7.36□□□□□ -1.23
VCP-205ENST00000479300 COL4A3BPQ9Y5P4 624 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 TDRD15B5MCY1 1934 aaKnown RBP7.36□□□□□ -1.23
VCP-205ENST00000479300 ZZEF1O43149 2961 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 BAHCC1Q9P281 2608 aa7.36□□□□□ -1.23
VCP-205ENST00000479300 ARID2Q68CP9 1835 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms