RNA–Protein interactions for RNA: ENST00000478887.1

SFI1-222, Transcript of SFI1 centrin binding protein, human

TSL 4

Gene SFI1, Length 662 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-222	ENST00000478887	MSTO1	Q9BUK6	570 aa		10.35	□□□□□ -0.75
SFI1-222	ENST00000478887	GBP3	Q9H0R5	595 aa		10.35	□□□□□ -0.75
SFI1-222	ENST00000478887	CXCL16	Q9H2A7	254 aa		10.35	□□□□□ -0.75
SFI1-222	ENST00000478887	SLC39A2	Q9NP94	309 aa		10.35	□□□□□ -0.75
SFI1-222	ENST00000478887	SPG21	Q9NZD8	308 aa		10.35	□□□□□ -0.75
SFI1-222	ENST00000478887	CHD7	Q9P2D1	2997 aa		10.35	□□□□□ -0.75
SFI1-222	ENST00000478887	CPSF3	Q9UKF6	684 aa	Known RBP	10.35	□□□□□ -0.75
SFI1-222	ENST00000478887	LZTS1	Q9Y250	596 aa		10.35	□□□□□ -0.75
SFI1-222	ENST00000478887	MTCH2	Q9Y6C9	303 aa		10.35	□□□□□ -0.75
SFI1-222	ENST00000478887	SMIM28	A0A1B0GU29	152 aa		10.34	□□□□□ -0.75
SFI1-222	ENST00000478887	TTC26	A0AVF1	554 aa		10.34	□□□□□ -0.75
SFI1-222	ENST00000478887	TGFB1I1	O43294	461 aa		10.34	□□□□□ -0.75
SFI1-222	ENST00000478887	PRPF40A	O75400	957 aa	Known RBP	10.34	□□□□□ -0.75
SFI1-222	ENST00000478887	TH	P07101	528 aa		10.34	□□□□□ -0.75
SFI1-222	ENST00000478887	CXCL8	P10145	99 aa		10.34	□□□□□ -0.75
SFI1-222	ENST00000478887	TNFSF9	P41273	254 aa		10.34	□□□□□ -0.75
SFI1-222	ENST00000478887	ALDH7A1	P49419	539 aa	Known RBP	10.34	□□□□□ -0.75
SFI1-222	ENST00000478887	SNRPF	P62306	86 aa	Known RBP	10.34	□□□□□ -0.75
SFI1-222	ENST00000478887	TUSC3	Q13454	348 aa		10.34	□□□□□ -0.75
SFI1-222	ENST00000478887	PNOC	Q13519	176 aa		10.34	□□□□□ -0.75
SFI1-222	ENST00000478887	CAMK1	Q14012	370 aa		10.34	□□□□□ -0.75
SFI1-222	ENST00000478887	ENOX2	Q16206	610 aa	Known RBP	10.34	□□□□□ -0.75
SFI1-222	ENST00000478887	PTPRO	Q16827	1216 aa		10.34	□□□□□ -0.75
SFI1-222	ENST00000478887	SLC10A6	Q3KNW5	377 aa		10.34	□□□□□ -0.75
SFI1-222	ENST00000478887	SEZ6	Q53EL9	994 aa		10.34	□□□□□ -0.75
SFI1-222	ENST00000478887	TIGD5	Q53EQ6	642 aa		10.34	□□□□□ -0.75
SFI1-222	ENST00000478887	GLRA4	Q5JXX5	417 aa		10.34	□□□□□ -0.75
SFI1-222	ENST00000478887	SYCP3	Q8IZU3	236 aa		10.34	□□□□□ -0.75
SFI1-222	ENST00000478887	BCL7C	Q8WUZ0	217 aa	Predicted RBP	10.34	□□□□□ -0.75
SFI1-222	ENST00000478887	POMGNT1	Q8WZA1	660 aa		10.34	□□□□□ -0.75
SFI1-222	ENST00000478887	IGSF21	Q96ID5	467 aa		10.34	□□□□□ -0.75
SFI1-222	ENST00000478887	GBP4	Q96PP9	640 aa		10.34	□□□□□ -0.75
SFI1-222	ENST00000478887	FAM193B	Q96PV7	902 aa	Predicted RBP	10.34	□□□□□ -0.75
SFI1-222	ENST00000478887	CBWD1	Q9BRT8	395 aa		10.34	□□□□□ -0.75
SFI1-222	ENST00000478887	PLEKHA5	Q9HAU0	1116 aa		10.34	□□□□□ -0.75
SFI1-222	ENST00000478887	ALG13	Q9NP73	1137 aa	Known RBP	10.34	□□□□□ -0.75
SFI1-222	ENST00000478887	MARCH5	Q9NX47	278 aa		10.34	□□□□□ -0.75
SFI1-222	ENST00000478887	HOOK1	Q9UJC3	728 aa	Known RBP	10.34	□□□□□ -0.75
SFI1-222	ENST00000478887	AGO2	Q9UKV8	859 aa	Known RBP	10.34	□□□□□ -0.75
SFI1-222	ENST00000478887	CDH23	Q9H251	3354 aa		10.33	□□□□□ -0.76
SFI1-222	ENST00000478887	NT5C1B-RDH14	C9J2C7	533 aa		10.33	□□□□□ -0.76
SFI1-222	ENST00000478887	NRP1	O14786	923 aa		10.33	□□□□□ -0.76
SFI1-222	ENST00000478887	KIAA0391	O15091	583 aa	Known RBP	10.33	□□□□□ -0.76
SFI1-222	ENST00000478887	EFEMP2	O95967	443 aa		10.33	□□□□□ -0.76
SFI1-222	ENST00000478887	LDHA	P00338	332 aa	Known RBP	10.33	□□□□□ -0.76
SFI1-222	ENST00000478887	IGFBP4	P22692	258 aa		10.33	□□□□□ -0.76
SFI1-222	ENST00000478887	DNAJB1	P25685	340 aa		10.33	□□□□□ -0.76
SFI1-222	ENST00000478887	PPP2R3A	Q06190	1150 aa		10.33	□□□□□ -0.76
SFI1-222	ENST00000478887	KNOP1	Q1ED39	458 aa	Known RBP	10.33	□□□□□ -0.76
SFI1-222	ENST00000478887	ARMCX5	Q6P1M9	558 aa		10.33	□□□□□ -0.76
SFI1-222	ENST00000478887	CRELD2	Q6UXH1	353 aa	Predicted RBP	10.33	□□□□□ -0.76
SFI1-222	ENST00000478887	HS2ST1	Q7LGA3	356 aa		10.33	□□□□□ -0.76
SFI1-222	ENST00000478887	CD302	Q8IX05	232 aa		10.33	□□□□□ -0.76
SFI1-222	ENST00000478887	NELFCD	Q8IXH7	590 aa		10.33	□□□□□ -0.76
SFI1-222	ENST00000478887	C12orf56	Q8IXR9	622 aa		10.33	□□□□□ -0.76
SFI1-222	ENST00000478887	RNF168	Q8IYW5	571 aa	Predicted RBP	10.33	□□□□□ -0.76
SFI1-222	ENST00000478887	POF1B	Q8WVV4	589 aa		10.33	□□□□□ -0.76
SFI1-222	ENST00000478887	TMEM169	Q96HH4	297 aa		10.33	□□□□□ -0.76
SFI1-222	ENST00000478887	ZMAT2	Q96NC0	199 aa	Known RBP	10.33	□□□□□ -0.76
SFI1-222	ENST00000478887	GSDMA	Q96QA5	445 aa		10.33	□□□□□ -0.76
SFI1-222	ENST00000478887	TSPAN18	Q96SJ8	248 aa		10.33	□□□□□ -0.76
SFI1-222	ENST00000478887	RPF1	Q9H9Y2	349 aa	Known RBP	10.33	□□□□□ -0.76
SFI1-222	ENST00000478887	AGPAT3	Q9NRZ7	376 aa		10.33	□□□□□ -0.76
SFI1-222	ENST00000478887	SLC38A7	Q9NVC3	462 aa		10.33	□□□□□ -0.76
SFI1-222	ENST00000478887	RMND1	Q9NWS8	449 aa		10.33	□□□□□ -0.76
SFI1-222	ENST00000478887	CGN	Q9P2M7	1197 aa	Known RBP	10.33	□□□□□ -0.76
SFI1-222	ENST00000478887	STK39	Q9UEW8	545 aa		10.33	□□□□□ -0.76
SFI1-222	ENST00000478887	FAN1	Q9Y2M0	1017 aa		10.33	□□□□□ -0.76
SFI1-222	ENST00000478887	PCDHA5	Q9Y5H7	936 aa		10.33	□□□□□ -0.76
SFI1-222	ENST00000478887	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	10.33	□□□□□ -0.76
SFI1-222	ENST00000478887	CASTOR2	A6NHX0	329 aa		10.32	□□□□□ -0.76
SFI1-222	ENST00000478887	TMEM189-UBE2V1	I3L0A0	370 aa		10.32	□□□□□ -0.76
SFI1-222	ENST00000478887	FSCN2	O14926	492 aa		10.32	□□□□□ -0.76
SFI1-222	ENST00000478887	EXTL3	O43909	919 aa		10.32	□□□□□ -0.76
SFI1-222	ENST00000478887	KIF20A	O95235	890 aa		10.32	□□□□□ -0.76
SFI1-222	ENST00000478887	SMC2	O95347	1197 aa		10.32	□□□□□ -0.76
SFI1-222	ENST00000478887	SLC34A2	O95436	690 aa		10.32	□□□□□ -0.76
SFI1-222	ENST00000478887	ALDH2	P05091	517 aa		10.32	□□□□□ -0.76
SFI1-222	ENST00000478887	OR1G1	P47890	313 aa		10.32	□□□□□ -0.76
SFI1-222	ENST00000478887	ACOT2	P49753	483 aa		10.32	□□□□□ -0.76
SFI1-222	ENST00000478887	KRT17	Q04695	432 aa		10.32	□□□□□ -0.76
SFI1-222	ENST00000478887	SOX4	Q06945	474 aa	Predicted RBP	10.32	□□□□□ -0.76
SFI1-222	ENST00000478887	HSP90AA2P	Q14568	343 aa	Predicted RBP	10.32	□□□□□ -0.76
SFI1-222	ENST00000478887	COBLL1	Q53SF7	1204 aa		10.32	□□□□□ -0.76
SFI1-222	ENST00000478887	PDE12	Q6L8Q7	609 aa	Known RBP	10.32	□□□□□ -0.76
SFI1-222	ENST00000478887	DDX53	Q86TM3	631 aa	Known RBP	10.32	□□□□□ -0.76
SFI1-222	ENST00000478887	BRSK2	Q8IWQ3	736 aa		10.32	□□□□□ -0.76
SFI1-222	ENST00000478887	GUF1	Q8N442	669 aa	Known RBP	10.32	□□□□□ -0.76
SFI1-222	ENST00000478887	ZSWIM2	Q8NEG5	633 aa		10.32	□□□□□ -0.76
SFI1-222	ENST00000478887	MAFA	Q8NHW3	353 aa	Predicted RBP	10.32	□□□□□ -0.76
SFI1-222	ENST00000478887	TMEM174	Q8WUU8	243 aa		10.32	□□□□□ -0.76
SFI1-222	ENST00000478887	SMARCE1	Q969G3	411 aa		10.32	□□□□□ -0.76
SFI1-222	ENST00000478887	FBXL18	Q96ME1	805 aa		10.32	□□□□□ -0.76
SFI1-222	ENST00000478887	UROC1	Q96N76	676 aa		10.32	□□□□□ -0.76
SFI1-222	ENST00000478887	PAAF1	Q9BRP4	392 aa		10.32	□□□□□ -0.76
SFI1-222	ENST00000478887	VN1R3	Q9BXE9	311 aa		10.32	□□□□□ -0.76
SFI1-222	ENST00000478887	ZBP1	Q9H171	429 aa		10.32	□□□□□ -0.76
SFI1-222	ENST00000478887	KCTD10	Q9H3F6	313 aa		10.32	□□□□□ -0.76
SFI1-222	ENST00000478887	ASB7	Q9H672	318 aa		10.32	□□□□□ -0.76
SFI1-222	ENST00000478887	TLR9	Q9NR96	1032 aa		10.32	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms