RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 PRG3Q9Y2Y8 225 aaPredicted RBP19.34■□□□□ 0.69
VPS72-204ENST00000471423 UBE4BO95155 1302 aa19.33■□□□□ 0.69
VPS72-204ENST00000471423 CARNS1A5YM72 827 aa19.33■□□□□ 0.68
VPS72-204ENST00000471423 NRP1O14786 923 aa19.33■□□□□ 0.68
VPS72-204ENST00000471423 PRPF40AO75400 957 aaKnown RBP19.33■□□□□ 0.68
VPS72-204ENST00000471423 HOXD13P35453 343 aa19.33■□□□□ 0.68
VPS72-204ENST00000471423 UBE2HP62256 183 aa19.33■□□□□ 0.68
VPS72-204ENST00000471423 PLCB3Q01970 1234 aa19.33■□□□□ 0.68
VPS72-204ENST00000471423 UBE3AQ05086 875 aa19.33■□□□□ 0.68
VPS72-204ENST00000471423 TUSC3Q13454 348 aa19.33■□□□□ 0.68
VPS72-204ENST00000471423 PNOCQ13519 176 aa19.33■□□□□ 0.68
VPS72-204ENST00000471423 CAMK1Q14012 370 aa19.33■□□□□ 0.68
VPS72-204ENST00000471423 NAB2Q15742 525 aa19.33■□□□□ 0.68
VPS72-204ENST00000471423 CCDC85BQ15834 202 aaPredicted RBP19.33■□□□□ 0.68
VPS72-204ENST00000471423 KYAT1Q16773 422 aa19.33■□□□□ 0.68
VPS72-204ENST00000471423 ALKAL1Q6UXT8 129 aa19.33■□□□□ 0.68
VPS72-204ENST00000471423 CLEC17AQ6ZS10 378 aa19.33■□□□□ 0.68
VPS72-204ENST00000471423 NELFCDQ8IXH7 590 aa19.33■□□□□ 0.68
VPS72-204ENST00000471423 KIAA0895Q8NCT3 520 aa19.33■□□□□ 0.68
VPS72-204ENST00000471423 ZNF507Q8TCN5 953 aa19.33■□□□□ 0.68
VPS72-204ENST00000471423 SCFD1Q8WVM8 642 aa19.33■□□□□ 0.68
VPS72-204ENST00000471423 PPM1EQ8WY54 764 aa19.33■□□□□ 0.68
VPS72-204ENST00000471423 TMEM169Q96HH4 297 aa19.33■□□□□ 0.68
VPS72-204ENST00000471423 IGSF21Q96ID5 467 aa19.33■□□□□ 0.68
VPS72-204ENST00000471423 PPP1R10Q96QC0 940 aaKnown RBP19.33■□□□□ 0.68
VPS72-204ENST00000471423 CNTN3Q9P232 1028 aa19.33■□□□□ 0.68
VPS72-204ENST00000471423 AGO2Q9UKV8 859 aaKnown RBP19.33■□□□□ 0.68
VPS72-204ENST00000471423 FAN1Q9Y2M0 1017 aa19.33■□□□□ 0.68
VPS72-204ENST00000471423 CITO14578 2027 aa19.33■□□□□ 0.68
VPS72-204ENST00000471423 TRIP11Q15643 1979 aa19.32■□□□□ 0.68
VPS72-204ENST00000471423 SMIM28A0A1B0GU29 152 aa19.32■□□□□ 0.68
VPS72-204ENST00000471423 CASTOR2A6NHX0 329 aa19.32■□□□□ 0.68
VPS72-204ENST00000471423 F8W810 466 aa19.32■□□□□ 0.68
VPS72-204ENST00000471423 KINO60870 393 aaKnown RBP19.32■□□□□ 0.68
VPS72-204ENST00000471423 SLC34A2O95436 690 aa19.32■□□□□ 0.68
VPS72-204ENST00000471423 ALDH2P05091 517 aa19.32■□□□□ 0.68
VPS72-204ENST00000471423 ACOT2P49753 483 aa19.32■□□□□ 0.68
VPS72-204ENST00000471423 KRT17Q04695 432 aa19.32■□□□□ 0.68
VPS72-204ENST00000471423 STK4Q13043 487 aa19.32■□□□□ 0.68
VPS72-204ENST00000471423 ENOX2Q16206 610 aaKnown RBP19.32■□□□□ 0.68
VPS72-204ENST00000471423 SLC10A6Q3KNW5 377 aa19.32■□□□□ 0.68
VPS72-204ENST00000471423 XKR4Q5GH76 650 aa19.32■□□□□ 0.68
VPS72-204ENST00000471423 CCDC47Q96A33 483 aaKnown RBP19.32■□□□□ 0.68
VPS72-204ENST00000471423 TIGD1Q96MW7 591 aa19.32■□□□□ 0.68
VPS72-204ENST00000471423 ZMAT2Q96NC0 199 aaKnown RBP19.32■□□□□ 0.68
VPS72-204ENST00000471423 CBWD1Q9BRT8 395 aa19.32■□□□□ 0.68
VPS72-204ENST00000471423 TLR9Q9NR96 1032 aa19.32■□□□□ 0.68
VPS72-204ENST00000471423 MARCH5Q9NX47 278 aa19.32■□□□□ 0.68
VPS72-204ENST00000471423 CPSF3Q9UKF6 684 aaKnown RBP19.32■□□□□ 0.68
VPS72-204ENST00000471423 LZTS1Q9Y250 596 aa19.32■□□□□ 0.68
VPS72-204ENST00000471423 RHOBTB3O94955 611 aa19.31■□□□□ 0.68
VPS72-204ENST00000471423 GARTP22102 1010 aa19.31■□□□□ 0.68
VPS72-204ENST00000471423 IRS1P35568 1242 aa19.31■□□□□ 0.68
VPS72-204ENST00000471423 PPP2R3AQ06190 1150 aa19.31■□□□□ 0.68
VPS72-204ENST00000471423 PSMD2Q13200 908 aa19.31■□□□□ 0.68
VPS72-204ENST00000471423 BMT2Q1RMZ1 405 aa19.31■□□□□ 0.68
VPS72-204ENST00000471423 TIGD5Q53EQ6 642 aa19.31■□□□□ 0.68
VPS72-204ENST00000471423 ARMCX5Q6P1M9 558 aa19.31■□□□□ 0.68
VPS72-204ENST00000471423 RABGGTAQ92696 567 aa19.31■□□□□ 0.68
VPS72-204ENST00000471423 ERCC4Q92889 916 aaPredicted RBP19.31■□□□□ 0.68
VPS72-204ENST00000471423 SAAL1Q96ER3 474 aa19.31■□□□□ 0.68
VPS72-204ENST00000471423 PAAF1Q9BRP4 392 aa19.31■□□□□ 0.68
VPS72-204ENST00000471423 RPF1Q9H9Y2 349 aaKnown RBP19.31■□□□□ 0.68
VPS72-204ENST00000471423 GOLGA2P5Q9HBQ8 144 aa19.31■□□□□ 0.68
VPS72-204ENST00000471423 PUF60Q9UHX1 559 aaKnown RBP19.31■□□□□ 0.68
VPS72-204ENST00000471423 PCDHGC5Q9Y5F6 944 aa19.31■□□□□ 0.68
VPS72-204ENST00000471423 TTC26A0AVF1 554 aa19.3■□□□□ 0.68
VPS72-204ENST00000471423 KCNE1P15382 129 aa19.3■□□□□ 0.68
VPS72-204ENST00000471423 ERVFC1P60507 584 aa19.3■□□□□ 0.68
VPS72-204ENST00000471423 SOX4Q06945 474 aaPredicted RBP19.3■□□□□ 0.68
VPS72-204ENST00000471423 ZSWIM2Q8NEG5 633 aa19.3■□□□□ 0.68
VPS72-204ENST00000471423 FAM212AQ96EL1 285 aa19.3■□□□□ 0.68
VPS72-204ENST00000471423 VN1R3Q9BXE9 311 aa19.3■□□□□ 0.68
VPS72-204ENST00000471423 PCIF1Q9H4Z3 704 aa19.3■□□□□ 0.68
VPS72-204ENST00000471423 NSUN3Q9H649 340 aaKnown RBP19.3■□□□□ 0.68
VPS72-204ENST00000471423 PLEKHA5Q9HAU0 1116 aa19.3■□□□□ 0.68
VPS72-204ENST00000471423 PDCD11Q14690 1871 aaKnown RBP19.3■□□□□ 0.68
VPS72-204ENST00000471423 REV3LO60673 3130 aa19.29■□□□□ 0.68
VPS72-204ENST00000471423 SPTBN5Q9NRC6 3674 aaKnown RBP19.29■□□□□ 0.68
VPS72-204ENST00000471423 LACTBL1A8MY62 500 aa19.29■□□□□ 0.68
VPS72-204ENST00000471423 TGFB1I1O43294 461 aa19.29■□□□□ 0.68
VPS72-204ENST00000471423 SPAG1Q07617 926 aa19.29■□□□□ 0.68
VPS72-204ENST00000471423 HSP90AA2PQ14568 343 aaPredicted RBP19.29■□□□□ 0.68
VPS72-204ENST00000471423 KCNB1Q14721 858 aa19.29■□□□□ 0.68
VPS72-204ENST00000471423 KNOP1Q1ED39 458 aaKnown RBP19.29■□□□□ 0.68
VPS72-204ENST00000471423 TCEAL5Q5H9L2 206 aa19.29■□□□□ 0.68
VPS72-204ENST00000471423 PLPP4Q5VZY2 271 aa19.29■□□□□ 0.68
VPS72-204ENST00000471423 CRELD2Q6UXH1 353 aaPredicted RBP19.29■□□□□ 0.68
VPS72-204ENST00000471423 MICAL1Q8TDZ2 1067 aa19.29■□□□□ 0.68
VPS72-204ENST00000471423 NOC3LQ8WTT2 800 aaKnown RBP19.29■□□□□ 0.68
VPS72-204ENST00000471423 C18orf25Q96B23 403 aaPredicted RBP19.29■□□□□ 0.68
VPS72-204ENST00000471423 TCF25Q9BQ70 676 aa19.29■□□□□ 0.68
VPS72-204ENST00000471423 FAM213AQ9BRX8 229 aa19.29■□□□□ 0.68
VPS72-204ENST00000471423 ENTPD7Q9NQZ7 604 aa19.29■□□□□ 0.68
VPS72-204ENST00000471423 AGPAT3Q9NRZ7 376 aa19.29■□□□□ 0.68
VPS72-204ENST00000471423 SLC38A7Q9NVC3 462 aa19.29■□□□□ 0.68
VPS72-204ENST00000471423 HOOK1Q9UJC3 728 aaKnown RBP19.29■□□□□ 0.68
VPS72-204ENST00000471423 MYO7AQ13402 2215 aa19.28■□□□□ 0.68
VPS72-204ENST00000471423 GOLGA8IPA6NC78 632 aa19.28■□□□□ 0.68
VPS72-204ENST00000471423 GOLGA8JA6NMD2 632 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms