RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 NFICP08651 508 aa10.76□□□□□ -0.69
SF3A1-207ENST00000471342 CLTAP09496 248 aa10.76□□□□□ -0.69
SF3A1-207ENST00000471342 EEF1GP26641 437 aaKnown RBP10.76□□□□□ -0.69
SF3A1-207ENST00000471342 RFC2P35250 354 aa10.76□□□□□ -0.69
SF3A1-207ENST00000471342 PSMC2P35998 433 aaKnown RBP10.76□□□□□ -0.69
SF3A1-207ENST00000471342 KLK7P49862 253 aa10.76□□□□□ -0.69
SF3A1-207ENST00000471342 COPB1P53618 953 aaKnown RBP10.76□□□□□ -0.69
SF3A1-207ENST00000471342 BFSP1Q12934 665 aa10.76□□□□□ -0.69
SF3A1-207ENST00000471342 KCNJ12Q14500 433 aa10.76□□□□□ -0.69
SF3A1-207ENST00000471342 UVSSAQ2YD98 709 aa10.76□□□□□ -0.69
SF3A1-207ENST00000471342 DCAF4L1Q3SXM0 396 aa10.76□□□□□ -0.69
SF3A1-207ENST00000471342 EPC2Q52LR7 807 aa10.76□□□□□ -0.69
SF3A1-207ENST00000471342 TDRD10Q5VZ19 366 aaKnown RBP10.76□□□□□ -0.69
SF3A1-207ENST00000471342 CEP135Q66GS9 1140 aa10.76□□□□□ -0.69
SF3A1-207ENST00000471342 LMBRD2Q68DH5 695 aaPredicted RBP10.76□□□□□ -0.69
SF3A1-207ENST00000471342 SLC24A5Q71RS6 500 aa10.76□□□□□ -0.69
SF3A1-207ENST00000471342 SV2AQ7L0J3 742 aa10.76□□□□□ -0.69
SF3A1-207ENST00000471342 TMCO2Q7Z6W1 182 aaPredicted RBP10.76□□□□□ -0.69
SF3A1-207ENST00000471342 DEFB128Q7Z7B8 93 aa10.76□□□□□ -0.69
SF3A1-207ENST00000471342 FAM186BQ8IYM0 893 aa10.76□□□□□ -0.69
SF3A1-207ENST00000471342 C7orf61Q8IZ16 206 aa10.76□□□□□ -0.69
SF3A1-207ENST00000471342 OLIG1Q8TAK6 271 aa10.76□□□□□ -0.69
SF3A1-207ENST00000471342 NOC3LQ8WTT2 800 aaKnown RBP10.76□□□□□ -0.69
SF3A1-207ENST00000471342 ELMO3Q96BJ8 720 aa10.76□□□□□ -0.69
SF3A1-207ENST00000471342 PPP1R10Q96QC0 940 aaKnown RBP10.76□□□□□ -0.69
SF3A1-207ENST00000471342 GDF15Q99988 308 aa10.76□□□□□ -0.69
SF3A1-207ENST00000471342 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.76□□□□□ -0.69
SF3A1-207ENST00000471342 MSTO1Q9BUK6 570 aa10.76□□□□□ -0.69
SF3A1-207ENST00000471342 XYLT2Q9H1B5 865 aa10.76□□□□□ -0.69
SF3A1-207ENST00000471342 ELAC1Q9H777 363 aaKnown RBP10.76□□□□□ -0.69
SF3A1-207ENST00000471342 IL23AQ9NPF7 189 aa10.76□□□□□ -0.69
SF3A1-207ENST00000471342 TAB2Q9NYJ8 693 aa10.76□□□□□ -0.69
SF3A1-207ENST00000471342 HCSTQ9UBK5 93 aa10.76□□□□□ -0.69
SF3A1-207ENST00000471342 ZMYND8Q9ULU4 1186 aaPredicted RBP10.76□□□□□ -0.69
SF3A1-207ENST00000471342 SMIM28A0A1B0GU29 152 aa10.75□□□□□ -0.69
SF3A1-207ENST00000471342 ANO9A1A5B4 782 aa10.75□□□□□ -0.69
SF3A1-207ENST00000471342 SMTNL1A8MU46 457 aa10.75□□□□□ -0.69
SF3A1-207ENST00000471342 LGALS16A8MUM7 142 aa10.75□□□□□ -0.69
SF3A1-207ENST00000471342 EXOC3O60645 756 aa10.75□□□□□ -0.69
SF3A1-207ENST00000471342 ERLIN2O94905 339 aa10.75□□□□□ -0.69
SF3A1-207ENST00000471342 SLC34A2O95436 690 aa10.75□□□□□ -0.69
SF3A1-207ENST00000471342 PARNO95453 639 aaKnown RBP10.75□□□□□ -0.69
SF3A1-207ENST00000471342 FGFR1P11362 822 aa10.75□□□□□ -0.69
SF3A1-207ENST00000471342 VAMP7P51809 220 aa10.75□□□□□ -0.69
SF3A1-207ENST00000471342 GUCY2FP51841 1108 aa10.75□□□□□ -0.69
SF3A1-207ENST00000471342 OSTNP61366 133 aa10.75□□□□□ -0.69
SF3A1-207ENST00000471342 WDR5P61964 334 aaKnown RBP10.75□□□□□ -0.69
SF3A1-207ENST00000471342 SPAG1Q07617 926 aa10.75□□□□□ -0.69
SF3A1-207ENST00000471342 STIM1Q13586 685 aa10.75□□□□□ -0.69
SF3A1-207ENST00000471342 ZACNQ401N2 412 aa10.75□□□□□ -0.69
SF3A1-207ENST00000471342 CNKSR3Q6P9H4 555 aa10.75□□□□□ -0.69
SF3A1-207ENST00000471342 ZNF365Q70YC5 407 aa10.75□□□□□ -0.69
SF3A1-207ENST00000471342 LIMS2Q7Z4I7 341 aa10.75□□□□□ -0.69
SF3A1-207ENST00000471342 C1orf127Q8N9H9 656 aa10.75□□□□□ -0.69
SF3A1-207ENST00000471342 TOP1MTQ969P6 601 aa10.75□□□□□ -0.69
SF3A1-207ENST00000471342 C18orf25Q96B23 403 aaPredicted RBP10.75□□□□□ -0.69
SF3A1-207ENST00000471342 CASD1Q96PB1 797 aa10.75□□□□□ -0.69
SF3A1-207ENST00000471342 PAAF1Q9BRP4 392 aa10.75□□□□□ -0.69
SF3A1-207ENST00000471342 TUBGCP2Q9BSJ2 902 aa10.75□□□□□ -0.69
SF3A1-207ENST00000471342 TTYH3Q9C0H2 523 aa10.75□□□□□ -0.69
SF3A1-207ENST00000471342 CACNG4Q9UBN1 327 aa10.75□□□□□ -0.69
SF3A1-207ENST00000471342 NME7Q9Y5B8 376 aa10.75□□□□□ -0.69
SF3A1-207ENST00000471342 TTC3P53804 2025 aa10.74□□□□□ -0.69
SF3A1-207ENST00000471342 ZNF233A6NK53 670 aa10.74□□□□□ -0.69
SF3A1-207ENST00000471342 F8W810 466 aa10.74□□□□□ -0.69
SF3A1-207ENST00000471342 M0QZ92 97 aa10.74□□□□□ -0.69
SF3A1-207ENST00000471342 SPTLC1O15269 473 aa10.74□□□□□ -0.69
SF3A1-207ENST00000471342 DGKIO75912 1065 aa10.74□□□□□ -0.69
SF3A1-207ENST00000471342 DDHD2O94830 711 aa10.74□□□□□ -0.69
SF3A1-207ENST00000471342 HARSP12081 509 aaKnown RBP10.74□□□□□ -0.69
SF3A1-207ENST00000471342 RAG1P15918 1043 aa10.74□□□□□ -0.69
SF3A1-207ENST00000471342 RPL13P26373 211 aaKnown RBP10.74□□□□□ -0.69
SF3A1-207ENST00000471342 DSC1Q08554 894 aa10.74□□□□□ -0.69
SF3A1-207ENST00000471342 KCNH2Q12809 1159 aa10.74□□□□□ -0.69
SF3A1-207ENST00000471342 TBX2Q13207 712 aaPredicted RBP10.74□□□□□ -0.69
SF3A1-207ENST00000471342 GSE1Q14687 1217 aa10.74□□□□□ -0.69
SF3A1-207ENST00000471342 VWA3BQ502W6 1294 aa10.74□□□□□ -0.69
SF3A1-207ENST00000471342 C9orf50Q5SZB4 431 aa10.74□□□□□ -0.69
SF3A1-207ENST00000471342 JADE1Q6IE81 842 aa10.74□□□□□ -0.69
SF3A1-207ENST00000471342 FAM43BQ6ZT52 329 aaPredicted RBP10.74□□□□□ -0.69
SF3A1-207ENST00000471342 ZNF280BQ86YH2 543 aa10.74□□□□□ -0.69
SF3A1-207ENST00000471342 HERVK_113Q902F9 699 aa10.74□□□□□ -0.69
SF3A1-207ENST00000471342 SEPT8Q92599 483 aa10.74□□□□□ -0.69
SF3A1-207ENST00000471342 APBB2Q92870 758 aa10.74□□□□□ -0.69
SF3A1-207ENST00000471342 BICD1Q96G01 975 aa10.74□□□□□ -0.69
SF3A1-207ENST00000471342 SCLT1Q96NL6 688 aa10.74□□□□□ -0.69
SF3A1-207ENST00000471342 GAD1Q99259 594 aa10.74□□□□□ -0.69
SF3A1-207ENST00000471342 CGRRF1Q99675 332 aa10.74□□□□□ -0.69
SF3A1-207ENST00000471342 TSG101Q99816 390 aa10.74□□□□□ -0.69
SF3A1-207ENST00000471342 FTHL17Q9BXU8 183 aa10.74□□□□□ -0.69
SF3A1-207ENST00000471342 XPO4Q9C0E2 1151 aaKnown RBP10.74□□□□□ -0.69
SF3A1-207ENST00000471342 GPR88Q9GZN0 384 aa10.74□□□□□ -0.69
SF3A1-207ENST00000471342 NAT10Q9H0A0 1025 aaKnown RBP10.74□□□□□ -0.69
SF3A1-207ENST00000471342 ASB7Q9H672 318 aa10.74□□□□□ -0.69
SF3A1-207ENST00000471342 PLEKHA5Q9HAU0 1116 aa10.74□□□□□ -0.69
SF3A1-207ENST00000471342 GRPEL1Q9HAV7 217 aa10.74□□□□□ -0.69
SF3A1-207ENST00000471342 APOBEC3GQ9HC16 384 aaKnown RBP10.74□□□□□ -0.69
SF3A1-207ENST00000471342 KIAA1586Q9HCI6 787 aa10.74□□□□□ -0.69
SF3A1-207ENST00000471342 RBAKQ9NYW8 714 aaPredicted RBP10.74□□□□□ -0.69
SF3A1-207ENST00000471342 KLK14Q9P0G3 267 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms