RNA–Protein interactions for RNA: ENST00000470776.1

LMCD1-207, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-207ENST00000470776 NEK11Q8NG66 645 aa9.65□□□□□ -0.86
LMCD1-207ENST00000470776 CPLX3Q8WVH0 158 aa9.65□□□□□ -0.86
LMCD1-207ENST00000470776 ANKRD7Q92527 254 aa9.65□□□□□ -0.86
LMCD1-207ENST00000470776 ZNF516Q92618 1163 aa9.65□□□□□ -0.86
LMCD1-207ENST00000470776 DHX38Q92620 1227 aaKnown RBP9.65□□□□□ -0.86
LMCD1-207ENST00000470776 SYN2Q92777 582 aaPredicted RBP9.65□□□□□ -0.86
LMCD1-207ENST00000470776 ZNF333Q96JL9 665 aa9.65□□□□□ -0.86
LMCD1-207ENST00000470776 SCLT1Q96NL6 688 aa9.65□□□□□ -0.86
LMCD1-207ENST00000470776 PPP1R16BQ96T49 567 aa9.65□□□□□ -0.86
LMCD1-207ENST00000470776 CGRRF1Q99675 332 aa9.65□□□□□ -0.86
LMCD1-207ENST00000470776 LSM14BQ9BX40 385 aaKnown RBP9.65□□□□□ -0.86
LMCD1-207ENST00000470776 NAA15Q9BXJ9 866 aaKnown RBP9.65□□□□□ -0.86
LMCD1-207ENST00000470776 NUCKS1Q9H1E3 243 aaKnown RBP9.65□□□□□ -0.86
LMCD1-207ENST00000470776 MMRN2Q9H8L6 949 aa9.65□□□□□ -0.86
LMCD1-207ENST00000470776 STARD7Q9NQZ5 370 aa9.65□□□□□ -0.86
LMCD1-207ENST00000470776 ABHD10Q9NUJ1 306 aa9.65□□□□□ -0.86
LMCD1-207ENST00000470776 RBAKQ9NYW8 714 aaPredicted RBP9.65□□□□□ -0.86
LMCD1-207ENST00000470776 ANKFY1Q9P2R3 1169 aa9.65□□□□□ -0.86
LMCD1-207ENST00000470776 PLAGL2Q9UPG8 496 aa9.65□□□□□ -0.86
LMCD1-207ENST00000470776 CDY2AQ9Y6F7 541 aa9.65□□□□□ -0.86
LMCD1-207ENST00000470776 M0QZ92 97 aa9.64□□□□□ -0.87
LMCD1-207ENST00000470776 ZC3H11AO75152 810 aaKnown RBP eCLIP9.64□□□□□ -0.87
LMCD1-207ENST00000470776 IL18RAPO95256 599 aa9.64□□□□□ -0.87
LMCD1-207ENST00000470776 SGPL1O95470 568 aa9.64□□□□□ -0.87
LMCD1-207ENST00000470776 UCHL3P15374 230 aa9.64□□□□□ -0.87
LMCD1-207ENST00000470776 RFX1P22670 979 aa9.64□□□□□ -0.87
LMCD1-207ENST00000470776 TNFSF9P41273 254 aa9.64□□□□□ -0.87
LMCD1-207ENST00000470776 MATR3P43243 847 aaKnown RBP eCLIP9.64□□□□□ -0.87
LMCD1-207ENST00000470776 GCLMP48507 274 aa9.64□□□□□ -0.87
LMCD1-207ENST00000470776 MNX1P50219 401 aaPredicted RBP9.64□□□□□ -0.87
LMCD1-207ENST00000470776 MXI1P50539 228 aa9.64□□□□□ -0.87
LMCD1-207ENST00000470776 ENOX2Q16206 610 aaKnown RBP9.64□□□□□ -0.87
LMCD1-207ENST00000470776 UBXN11Q5T124 520 aa9.64□□□□□ -0.87
LMCD1-207ENST00000470776 NOTUMQ6P988 496 aa9.64□□□□□ -0.87
LMCD1-207ENST00000470776 PDXDC1Q6P996 788 aa9.64□□□□□ -0.87
LMCD1-207ENST00000470776 SLC27A1Q6PCB7 646 aa9.64□□□□□ -0.87
LMCD1-207ENST00000470776 TRIM65Q6PJ69 517 aa9.64□□□□□ -0.87
LMCD1-207ENST00000470776 TRAF7Q6Q0C0 670 aa9.64□□□□□ -0.87
LMCD1-207ENST00000470776 NYAP1Q6ZVC0 841 aa9.64□□□□□ -0.87
LMCD1-207ENST00000470776 FAM228AQ86W67 206 aa9.64□□□□□ -0.87
LMCD1-207ENST00000470776 WDR49Q8IV35 697 aa9.64□□□□□ -0.87
LMCD1-207ENST00000470776 CD302Q8IX05 232 aa9.64□□□□□ -0.87
LMCD1-207ENST00000470776 USP38Q8NB14 1042 aa9.64□□□□□ -0.87
LMCD1-207ENST00000470776 ZNF397Q8NF99 534 aaPredicted RBP9.64□□□□□ -0.87
LMCD1-207ENST00000470776 VTI1AQ96AJ9 217 aa9.64□□□□□ -0.87
LMCD1-207ENST00000470776 CCDC127Q96BQ5 260 aa9.64□□□□□ -0.87
LMCD1-207ENST00000470776 CPB2Q96IY4 423 aa9.64□□□□□ -0.87
LMCD1-207ENST00000470776 PCMTD1Q96MG8 357 aaPredicted RBP9.64□□□□□ -0.87
LMCD1-207ENST00000470776 DEFB118Q96PH6 123 aa9.64□□□□□ -0.87
LMCD1-207ENST00000470776 FNBP1Q96RU3 617 aa9.64□□□□□ -0.87
LMCD1-207ENST00000470776 TSPAN18Q96SJ8 248 aa9.64□□□□□ -0.87
LMCD1-207ENST00000470776 POP1Q99575 1024 aaKnown RBP9.64□□□□□ -0.87
LMCD1-207ENST00000470776 ADPGKQ9BRR6 497 aa9.64□□□□□ -0.87
LMCD1-207ENST00000470776 CRACR2AQ9BSW2 395 aa9.64□□□□□ -0.87
LMCD1-207ENST00000470776 INTS2Q9H0H0 1204 aaKnown RBP9.64□□□□□ -0.87
LMCD1-207ENST00000470776 RNF208Q9H0X6 261 aa9.64□□□□□ -0.87
LMCD1-207ENST00000470776 ASB7Q9H672 318 aa9.64□□□□□ -0.87
LMCD1-207ENST00000470776 PLEKHA5Q9HAU0 1116 aa9.64□□□□□ -0.87
LMCD1-207ENST00000470776 PDE11AQ9HCR9 933 aa9.64□□□□□ -0.87
LMCD1-207ENST00000470776 CHST12Q9NRB3 414 aa9.64□□□□□ -0.87
LMCD1-207ENST00000470776 FAM207AQ9NSI2 230 aaPredicted RBP9.64□□□□□ -0.87
LMCD1-207ENST00000470776 NOC2LQ9Y3T9 749 aaKnown RBP9.64□□□□□ -0.87
LMCD1-207ENST00000470776 CCDC85CA6NKD9 419 aa9.63□□□□□ -0.87
LMCD1-207ENST00000470776 MEFVO15553 781 aaPredicted RBP9.63□□□□□ -0.87
LMCD1-207ENST00000470776 ARHGAP6O43182 974 aa9.63□□□□□ -0.87
LMCD1-207ENST00000470776 ZSCAN12O43309 604 aa9.63□□□□□ -0.87
LMCD1-207ENST00000470776 CD4P01730 458 aa9.63□□□□□ -0.87
LMCD1-207ENST00000470776 STAG3L1P0CL83 205 aa9.63□□□□□ -0.87
LMCD1-207ENST00000470776 ACTN1P12814 892 aa9.63□□□□□ -0.87
LMCD1-207ENST00000470776 FGFR4P22455 802 aa9.63□□□□□ -0.87
LMCD1-207ENST00000470776 JAM2P57087 298 aa9.63□□□□□ -0.87
LMCD1-207ENST00000470776 RBM10P98175 930 aaKnown RBP9.63□□□□□ -0.87
LMCD1-207ENST00000470776 GOLGA8FQ08AF8 430 aa9.63□□□□□ -0.87
LMCD1-207ENST00000470776 GOLGA8DPQ0D2H9 430 aa9.63□□□□□ -0.87
LMCD1-207ENST00000470776 SLC10A6Q3KNW5 377 aa9.63□□□□□ -0.87
LMCD1-207ENST00000470776 SEZ6Q53EL9 994 aa9.63□□□□□ -0.87
LMCD1-207ENST00000470776 XKR4Q5GH76 650 aa9.63□□□□□ -0.87
LMCD1-207ENST00000470776 FBXO47Q5MNV8 452 aa9.63□□□□□ -0.87
LMCD1-207ENST00000470776 C1orf53Q5VUE5 145 aa9.63□□□□□ -0.87
LMCD1-207ENST00000470776 WDR59Q6PJI9 974 aa9.63□□□□□ -0.87
LMCD1-207ENST00000470776 CDR2LQ86X02 465 aaPredicted RBP9.63□□□□□ -0.87
LMCD1-207ENST00000470776 NT5DC4Q86YG4 428 aa9.63□□□□□ -0.87
LMCD1-207ENST00000470776 TMTC1Q8IUR5 882 aa9.63□□□□□ -0.87
LMCD1-207ENST00000470776 FAM126BQ8IXS8 530 aa9.63□□□□□ -0.87
LMCD1-207ENST00000470776 THNSL1Q8IYQ7 743 aa9.63□□□□□ -0.87
LMCD1-207ENST00000470776 CCAR2Q8N163 923 aaKnown RBP9.63□□□□□ -0.87
LMCD1-207ENST00000470776 CEP120Q8N960 986 aa9.63□□□□□ -0.87
LMCD1-207ENST00000470776 FBXL13Q8NEE6 735 aa9.63□□□□□ -0.87
LMCD1-207ENST00000470776 SEMA4DQ92854 862 aa9.63□□□□□ -0.87
LMCD1-207ENST00000470776 C16orf45Q96MC5 204 aaPredicted RBP9.63□□□□□ -0.87
LMCD1-207ENST00000470776 BAG1Q99933 345 aaPredicted RBP9.63□□□□□ -0.87
LMCD1-207ENST00000470776 TRAIPQ9BWF2 469 aa9.63□□□□□ -0.87
LMCD1-207ENST00000470776 RPF1Q9H9Y2 349 aaKnown RBP9.63□□□□□ -0.87
LMCD1-207ENST00000470776 ERVK-5Q9HDB9 667 aa9.63□□□□□ -0.87
LMCD1-207ENST00000470776 TOPORSQ9NS56 1045 aaPredicted RBP9.63□□□□□ -0.87
LMCD1-207ENST00000470776 TRMT13Q9NUP7 481 aaKnown RBP9.63□□□□□ -0.87
LMCD1-207ENST00000470776 RAB20Q9NX57 234 aa9.63□□□□□ -0.87
LMCD1-207ENST00000470776 AIPL1Q9NZN9 384 aa9.63□□□□□ -0.87
LMCD1-207ENST00000470776 GCNT4Q9P109 453 aa9.63□□□□□ -0.87
LMCD1-207ENST00000470776 APEX2Q9UBZ4 518 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms