RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 DDX1Q92499 740 aaKnown RBP8.2□□□□□ -1.1
COL6A3-208ENST00000468792 ZNF516Q92618 1163 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 GLG1Q92896 1179 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 CCDC127Q96BQ5 260 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 VCPIP1Q96JH7 1222 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 CAPZA3Q96KX2 299 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 SPATA33Q96N06 139 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 NAP1L3Q99457 506 aaPredicted RBP8.2□□□□□ -1.1
COL6A3-208ENST00000468792 ACO2Q99798 780 aaKnown RBP8.2□□□□□ -1.1
COL6A3-208ENST00000468792 MSTO1Q9BUK6 570 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 KATNBL1Q9H079 304 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 CARD9Q9H257 536 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 FAM124BQ9H5Z6 455 aaPredicted RBP8.2□□□□□ -1.1
COL6A3-208ENST00000468792 PTPRHQ9HD43 1115 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 RBAKQ9NYW8 714 aaPredicted RBP8.2□□□□□ -1.1
COL6A3-208ENST00000468792 UVRAGQ9P2Y5 699 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 GTF3C4Q9UKN8 822 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 AMFRQ9UKV5 643 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 PCDHB2Q9Y5E7 798 aa8.2□□□□□ -1.1
COL6A3-208ENST00000468792 ZNF236Q9UL36 1845 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 CCL15-CCL14A0A0B4J2E2 113 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 BTBD19C9JJ37 291 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 BHMG1C9JSJ3 638 aaPredicted RBP8.19□□□□□ -1.1
COL6A3-208ENST00000468792 ABLIM1O14639 778 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 OGTO15294 1046 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 B4GALT4O60513 344 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 PEX10O60683 326 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 GH1P01241 217 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 TFRCP02786 760 aaKnown RBP8.19□□□□□ -1.1
COL6A3-208ENST00000468792 FTLP02792 175 aaPredicted RBP8.19□□□□□ -1.1
COL6A3-208ENST00000468792 CYP1A2P05177 515 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 RHOXF2BP0C7M4 288 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 MYBL1P10243 752 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 HSPA6P17066 643 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 MAPK4P31152 587 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 PLA2G4AP47712 749 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 PDE6CP51160 858 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 NLRP11P59045 1033 aaKnown RBP8.19□□□□□ -1.1
COL6A3-208ENST00000468792 PTENP60484 403 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 TNNC1P63316 161 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 CDC42EP1Q00587 391 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 FMO1Q01740 532 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 GPS2Q13227 327 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 NNTQ13423 1086 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 ENOX2Q16206 610 aaKnown RBP8.19□□□□□ -1.1
COL6A3-208ENST00000468792 GPR162Q16538 588 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 CCL15Q16663 113 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 EAPPQ56P03 285 aaPredicted RBP8.19□□□□□ -1.1
COL6A3-208ENST00000468792 EMBQ6PCB8 327 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 NOP9Q86U38 636 aaKnown RBP8.19□□□□□ -1.1
COL6A3-208ENST00000468792 RPUSD2Q8IZ73 545 aaKnown RBP8.19□□□□□ -1.1
COL6A3-208ENST00000468792 LINC01465Q8N7H1 131 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 C2orf69Q8N8R5 385 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 BRI3BPQ8WY22 251 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 TRIM11Q96F44 468 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 PARK7Q99497 189 aaKnown RBP8.19□□□□□ -1.1
COL6A3-208ENST00000468792 POP1Q99575 1024 aaKnown RBP8.19□□□□□ -1.1
COL6A3-208ENST00000468792 RHOXF2Q9BQY4 288 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.19□□□□□ -1.1
COL6A3-208ENST00000468792 TARS2Q9BW92 718 aaKnown RBP8.19□□□□□ -1.1
COL6A3-208ENST00000468792 HAPLN2Q9GZV7 340 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 EPC1Q9H2F5 836 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 ACBD3Q9H3P7 528 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 R3HDMLQ9H3Y0 253 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 GBA2Q9HCG7 927 aaPredicted RBP8.19□□□□□ -1.1
COL6A3-208ENST00000468792 AVENQ9NQS1 362 aaPredicted RBP8.19□□□□□ -1.1
COL6A3-208ENST00000468792 C1orf112Q9NSG2 853 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 STIM2Q9P246 746 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 LCMT1Q9UIC8 334 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 CPSF3Q9UKF6 684 aaKnown RBP8.19□□□□□ -1.1
COL6A3-208ENST00000468792 SRCAPQ6ZRS2 3230 aa8.19□□□□□ -1.1
COL6A3-208ENST00000468792 SLC15A5A6NIM6 579 aa8.18□□□□□ -1.1
COL6A3-208ENST00000468792 PGRMC1O00264 195 aaKnown RBP8.18□□□□□ -1.1
COL6A3-208ENST00000468792 CYP26A1O43174 497 aa8.18□□□□□ -1.1
COL6A3-208ENST00000468792 NCK2O43639 380 aa8.18□□□□□ -1.1
COL6A3-208ENST00000468792 BUB1BO60566 1050 aaPredicted RBP8.18□□□□□ -1.1
COL6A3-208ENST00000468792 LRRN2O75325 713 aa8.18□□□□□ -1.1
COL6A3-208ENST00000468792 SASH3O75995 380 aa8.18□□□□□ -1.1
COL6A3-208ENST00000468792 SGPL1O95470 568 aa8.18□□□□□ -1.1
COL6A3-208ENST00000468792 C22orf31O95567 290 aa8.18□□□□□ -1.1
COL6A3-208ENST00000468792 FTCDO95954 541 aa8.18□□□□□ -1.1
COL6A3-208ENST00000468792 HLA-DRAP01903 254 aa8.18□□□□□ -1.1
COL6A3-208ENST00000468792 PRKCBP05771 671 aa8.18□□□□□ -1.1
COL6A3-208ENST00000468792 DLATP10515 647 aaKnown RBP8.18□□□□□ -1.1
COL6A3-208ENST00000468792 UNGP13051 313 aaPredicted RBP8.18□□□□□ -1.1
COL6A3-208ENST00000468792 TNNI1P19237 187 aa8.18□□□□□ -1.1
COL6A3-208ENST00000468792 ACO1P21399 889 aaKnown RBP8.18□□□□□ -1.1
COL6A3-208ENST00000468792 ADORA2AP29274 412 aa8.18□□□□□ -1.1
COL6A3-208ENST00000468792 AARSP49588 968 aaKnown RBP eCLIP8.18□□□□□ -1.1
COL6A3-208ENST00000468792 PCBP1Q15365 356 aaKnown RBP eCLIP8.18□□□□□ -1.1
COL6A3-208ENST00000468792 DUOXA2Q1HG44 320 aa8.18□□□□□ -1.1
COL6A3-208ENST00000468792 DUSP28Q4G0W2 176 aa8.18□□□□□ -1.1
COL6A3-208ENST00000468792 TDRD10Q5VZ19 366 aaKnown RBP8.18□□□□□ -1.1
COL6A3-208ENST00000468792 SPRYD7Q5W111 196 aa8.18□□□□□ -1.1
COL6A3-208ENST00000468792 IQSEC1Q6DN90 963 aa8.18□□□□□ -1.1
COL6A3-208ENST00000468792 ACAD10Q6JQN1 1059 aa8.18□□□□□ -1.1
COL6A3-208ENST00000468792 MPZL3Q6UWV2 235 aa8.18□□□□□ -1.1
COL6A3-208ENST00000468792 TRMT1LQ7Z2T5 733 aaKnown RBP8.18□□□□□ -1.1
COL6A3-208ENST00000468792 DAAM2Q86T65 1068 aa8.18□□□□□ -1.1
COL6A3-208ENST00000468792 FBXO16Q8IX29 292 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms