RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 AKAP5P24588 427 aa12.11□□□□□ -0.47
VCP-204ENST00000466100 EEF1GP26641 437 aaKnown RBP12.11□□□□□ -0.47
VCP-204ENST00000466100 MAGEA10P43363 369 aaPredicted RBP12.11□□□□□ -0.47
VCP-204ENST00000466100 CLDN10P78369 228 aa12.11□□□□□ -0.47
VCP-204ENST00000466100 DEFB103AP81534 67 aa12.11□□□□□ -0.47
VCP-204ENST00000466100 BFSP1Q12934 665 aa12.11□□□□□ -0.47
VCP-204ENST00000466100 KCNJ12Q14500 433 aa12.11□□□□□ -0.47
VCP-204ENST00000466100 HSP90AA2PQ14568 343 aaPredicted RBP12.11□□□□□ -0.47
VCP-204ENST00000466100 TPD52L1Q16890 204 aaPredicted RBP12.11□□□□□ -0.47
VCP-204ENST00000466100 HSP90AA4PQ58FG1 418 aa12.11□□□□□ -0.47
VCP-204ENST00000466100 TCP11X2Q5H9J9 407 aa12.11□□□□□ -0.47
VCP-204ENST00000466100 RASIP1Q5U651 963 aa12.11□□□□□ -0.47
VCP-204ENST00000466100 PSRC1Q6PGN9 363 aaPredicted RBP12.11□□□□□ -0.47
VCP-204ENST00000466100 ZNF365Q70YC5 407 aa12.11□□□□□ -0.47
VCP-204ENST00000466100 INTS8Q75QN2 995 aaKnown RBP12.11□□□□□ -0.47
VCP-204ENST00000466100 EFCAB13Q8IY85 973 aa12.11□□□□□ -0.47
VCP-204ENST00000466100 RDH13Q8NBN7 331 aa12.11□□□□□ -0.47
VCP-204ENST00000466100 GSTCDQ8NEC7 633 aa12.11□□□□□ -0.47
VCP-204ENST00000466100 TMC2Q8TDI7 906 aa12.11□□□□□ -0.47
VCP-204ENST00000466100 PARD3BQ8TEW8 1205 aa12.11□□□□□ -0.47
VCP-204ENST00000466100 APOL6Q9BWW8 343 aa12.11□□□□□ -0.47
VCP-204ENST00000466100 RPF1Q9H9Y2 349 aaKnown RBP12.11□□□□□ -0.47
VCP-204ENST00000466100 PLEKHA5Q9HAU0 1116 aa12.11□□□□□ -0.47
VCP-204ENST00000466100 RC3H2Q9HBD1 1191 aaKnown RBP12.11□□□□□ -0.47
VCP-204ENST00000466100 CNTN3Q9P232 1028 aa12.11□□□□□ -0.47
VCP-204ENST00000466100 ARMCX3Q9UH62 379 aaPredicted RBP12.11□□□□□ -0.47
VCP-204ENST00000466100 LIMA1Q9UHB6 759 aaKnown RBP12.11□□□□□ -0.47
VCP-204ENST00000466100 GIT1Q9Y2X7 761 aa12.11□□□□□ -0.47
VCP-204ENST00000466100 LRRIQ3A6PVS8 624 aaPredicted RBP12.1□□□□□ -0.47
VCP-204ENST00000466100 LACTBL1A8MY62 500 aa12.1□□□□□ -0.47
VCP-204ENST00000466100 PTGESO14684 152 aa12.1□□□□□ -0.47
VCP-204ENST00000466100 IL18RAPO95256 599 aa12.1□□□□□ -0.47
VCP-204ENST00000466100 FGBP02675 491 aa12.1□□□□□ -0.47
VCP-204ENST00000466100 TRIM49P0CI25 452 aa12.1□□□□□ -0.47
VCP-204ENST00000466100 TRIM49CP0CI26 452 aa12.1□□□□□ -0.47
VCP-204ENST00000466100 ACTN1P12814 892 aa12.1□□□□□ -0.47
VCP-204ENST00000466100 KCNE1P15382 129 aa12.1□□□□□ -0.47
VCP-204ENST00000466100 AFF1P51825 1210 aaKnown RBP12.1□□□□□ -0.47
VCP-204ENST00000466100 DLG4P78352 724 aa12.1□□□□□ -0.47
VCP-204ENST00000466100 KRT31Q15323 416 aa12.1□□□□□ -0.47
VCP-204ENST00000466100 CCDC40Q4G0X9 1142 aa12.1□□□□□ -0.47
VCP-204ENST00000466100 CLLU1OSQ5K130 101 aa12.1□□□□□ -0.47
VCP-204ENST00000466100 OTOP2Q7RTS6 562 aa12.1□□□□□ -0.47
VCP-204ENST00000466100 NPAS4Q8IUM7 802 aa12.1□□□□□ -0.47
VCP-204ENST00000466100 FAM114A1Q8IWE2 563 aa12.1□□□□□ -0.47
VCP-204ENST00000466100 HACE1Q8IYU2 909 aa12.1□□□□□ -0.47
VCP-204ENST00000466100 HERVK_113Q902F9 699 aa12.1□□□□□ -0.47
VCP-204ENST00000466100 SLC35C1Q96A29 364 aa12.1□□□□□ -0.47
VCP-204ENST00000466100 PGBD4Q96DM1 585 aa12.1□□□□□ -0.47
VCP-204ENST00000466100 FAM84AQ96KN4 292 aa12.1□□□□□ -0.47
VCP-204ENST00000466100 ZMAT2Q96NC0 199 aaKnown RBP12.1□□□□□ -0.47
VCP-204ENST00000466100 CGRRF1Q99675 332 aa12.1□□□□□ -0.47
VCP-204ENST00000466100 LBHD1Q9BQE6 289 aaPredicted RBP12.1□□□□□ -0.47
VCP-204ENST00000466100 ASB7Q9H672 318 aa12.1□□□□□ -0.47
VCP-204ENST00000466100 METTL14Q9HCE5 456 aaKnown RBP12.1□□□□□ -0.47
VCP-204ENST00000466100 PDE11AQ9HCR9 933 aa12.1□□□□□ -0.47
VCP-204ENST00000466100 CXXC1Q9P0U4 656 aaPredicted RBP12.1□□□□□ -0.47
VCP-204ENST00000466100 NLRC5Q86WI3 1866 aa12.1□□□□□ -0.47
VCP-204ENST00000466100 FSD2A1L4K1 749 aa12.09□□□□□ -0.47
VCP-204ENST00000466100 ARL5CA6NH57 179 aa12.09□□□□□ -0.47
VCP-204ENST00000466100 LRRC10BA6NIK2 292 aa12.09□□□□□ -0.47
VCP-204ENST00000466100 OFD1O75665 1012 aa12.09□□□□□ -0.47
VCP-204ENST00000466100 NFICP08651 508 aa12.09□□□□□ -0.47
VCP-204ENST00000466100 MLH1P40692 756 aa12.09□□□□□ -0.47
VCP-204ENST00000466100 VAMP7P51809 220 aa12.09□□□□□ -0.47
VCP-204ENST00000466100 PPP2R3AQ06190 1150 aa12.09□□□□□ -0.47
VCP-204ENST00000466100 SPAG1Q07617 926 aa12.09□□□□□ -0.47
VCP-204ENST00000466100 NAB2Q15742 525 aa12.09□□□□□ -0.47
VCP-204ENST00000466100 ZBTB6Q15916 424 aa12.09□□□□□ -0.47
VCP-204ENST00000466100 MIIPQ5JXC2 388 aa12.09□□□□□ -0.47
VCP-204ENST00000466100 CD302Q8IX05 232 aa12.09□□□□□ -0.47
VCP-204ENST00000466100 TOP1MTQ969P6 601 aa12.09□□□□□ -0.47
VCP-204ENST00000466100 ZFP42Q96MM3 310 aa12.09□□□□□ -0.47
VCP-204ENST00000466100 GAD1Q99259 594 aa12.09□□□□□ -0.47
VCP-204ENST00000466100 GDF15Q99988 308 aa12.09□□□□□ -0.47
VCP-204ENST00000466100 RSAD1Q9HA92 442 aa12.09□□□□□ -0.47
VCP-204ENST00000466100 UBN1Q9NPG3 1134 aa12.09□□□□□ -0.47
VCP-204ENST00000466100 TOPORSQ9NS56 1045 aaPredicted RBP12.09□□□□□ -0.47
VCP-204ENST00000466100 KLK14Q9P0G3 267 aa12.09□□□□□ -0.47
VCP-204ENST00000466100 PARP2Q9UGN5 583 aa12.09□□□□□ -0.47
VCP-204ENST00000466100 PLAGL2Q9UPG8 496 aa12.09□□□□□ -0.47
VCP-204ENST00000466100 C2CD2Q9Y426 696 aa12.09□□□□□ -0.47
VCP-204ENST00000466100 CDH23Q9H251 3354 aa12.08□□□□□ -0.48
VCP-204ENST00000466100 SMIM28A0A1B0GU29 152 aa12.08□□□□□ -0.48
VCP-204ENST00000466100 H0YGN5 161 aa12.08□□□□□ -0.48
VCP-204ENST00000466100 GOLGA6L19H0YKK7 550 aa12.08□□□□□ -0.48
VCP-204ENST00000466100 AMHP03971 560 aa12.08□□□□□ -0.48
VCP-204ENST00000466100 FGFR1P11362 822 aa12.08□□□□□ -0.48
VCP-204ENST00000466100 KRT13P13646 458 aa12.08□□□□□ -0.48
VCP-204ENST00000466100 GATMP50440 423 aa12.08□□□□□ -0.48
VCP-204ENST00000466100 YARSP54577 528 aaKnown RBP12.08□□□□□ -0.48
VCP-204ENST00000466100 PPP3CAQ08209 521 aa12.08□□□□□ -0.48
VCP-204ENST00000466100 SURF1Q15526 300 aa12.08□□□□□ -0.48
VCP-204ENST00000466100 MAN2A1Q16706 1144 aa12.08□□□□□ -0.48
VCP-204ENST00000466100 JADE1Q6IE81 842 aa12.08□□□□□ -0.48
VCP-204ENST00000466100 C15orf39Q6ZRI6 1047 aa12.08□□□□□ -0.48
VCP-204ENST00000466100 WDR49Q8IV35 697 aa12.08□□□□□ -0.48
VCP-204ENST00000466100 RNF169Q8NCN4 708 aa12.08□□□□□ -0.48
VCP-204ENST00000466100 OR5B17Q8NGF7 314 aa12.08□□□□□ -0.48
VCP-204ENST00000466100 CXorf38Q8TB03 319 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms