RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 ZNF202O95125 648 aa18.61■□□□□ 0.57
VPS52-215ENST00000464425 GCNT3O95395 438 aa18.61■□□□□ 0.57
VPS52-215ENST00000464425 CXCL14O95715 111 aa18.61■□□□□ 0.57
VPS52-215ENST00000464425 MYBP10242 640 aa18.61■□□□□ 0.57
VPS52-215ENST00000464425 KCNA5P22460 613 aa18.61■□□□□ 0.57
VPS52-215ENST00000464425 ABCD1P33897 745 aa18.61■□□□□ 0.57
VPS52-215ENST00000464425 CASP5P51878 434 aa18.61■□□□□ 0.57
VPS52-215ENST00000464425 MRPS5P82675 430 aaKnown RBP18.61■□□□□ 0.57
VPS52-215ENST00000464425 KCNA1Q09470 495 aa18.61■□□□□ 0.57
VPS52-215ENST00000464425 COASYQ13057 564 aa18.61■□□□□ 0.57
VPS52-215ENST00000464425 TUSC3Q13454 348 aa18.61■□□□□ 0.57
VPS52-215ENST00000464425 SNW1Q13573 536 aaKnown RBP18.61■□□□□ 0.57
VPS52-215ENST00000464425 SLC39A4Q6P5W5 647 aa18.61■□□□□ 0.57
VPS52-215ENST00000464425 GRAMD1CQ8IYS0 662 aa18.61■□□□□ 0.57
VPS52-215ENST00000464425 CEP57L1Q8IYX8 460 aa18.61■□□□□ 0.57
VPS52-215ENST00000464425 ATXN2LQ8WWM7 1075 aaKnown RBP18.61■□□□□ 0.57
VPS52-215ENST00000464425 AUTS2Q8WXX7 1259 aa18.61■□□□□ 0.57
VPS52-215ENST00000464425 HPS3Q969F9 1004 aa18.61■□□□□ 0.57
VPS52-215ENST00000464425 C7orf25Q9BPX7 421 aa18.61■□□□□ 0.57
VPS52-215ENST00000464425 PAAF1Q9BRP4 392 aa18.61■□□□□ 0.57
VPS52-215ENST00000464425 COLEC11Q9BWP8 271 aa18.61■□□□□ 0.57
VPS52-215ENST00000464425 FGFBP2Q9BYJ0 223 aa18.61■□□□□ 0.57
VPS52-215ENST00000464425 UBE2ZQ9H832 354 aaPredicted RBP18.61■□□□□ 0.57
VPS52-215ENST00000464425 NGRNQ9NPE2 291 aaKnown RBP18.61■□□□□ 0.57
VPS52-215ENST00000464425 TOPORSQ9NS56 1045 aaPredicted RBP18.61■□□□□ 0.57
VPS52-215ENST00000464425 XIRP2A4UGR9 3374 aa18.61■□□□□ 0.57
VPS52-215ENST00000464425 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.6■□□□□ 0.57
VPS52-215ENST00000464425 SMIM28A0A1B0GU29 152 aa18.6■□□□□ 0.57
VPS52-215ENST00000464425 TISP43B9A030 160 aa18.6■□□□□ 0.57
VPS52-215ENST00000464425 LINC01565O15544 149 aa18.6■□□□□ 0.57
VPS52-215ENST00000464425 PPP1R37O75864 691 aa18.6■□□□□ 0.57
VPS52-215ENST00000464425 PIGRP01833 764 aa18.6■□□□□ 0.57
VPS52-215ENST00000464425 SMC1AQ14683 1233 aaKnown RBP18.6■□□□□ 0.57
VPS52-215ENST00000464425 CNNM4Q6P4Q7 775 aa18.6■□□□□ 0.57
VPS52-215ENST00000464425 ALKAL1Q6UXT8 129 aa18.6■□□□□ 0.57
VPS52-215ENST00000464425 MRPL43Q8N983 215 aaKnown RBP18.6■□□□□ 0.57
VPS52-215ENST00000464425 PABPC5Q96DU9 382 aaKnown RBP18.6■□□□□ 0.57
VPS52-215ENST00000464425 ASB2Q96Q27 587 aa18.6■□□□□ 0.57
VPS52-215ENST00000464425 STRA6Q9BX79 667 aa18.6■□□□□ 0.57
VPS52-215ENST00000464425 OLFML3Q9NRN5 406 aa18.6■□□□□ 0.57
VPS52-215ENST00000464425 LMBRD1Q9NUN5 540 aa18.6■□□□□ 0.57
VPS52-215ENST00000464425 PCDHB13Q9Y5F0 798 aa18.6■□□□□ 0.57
VPS52-215ENST00000464425 SPTBN5Q9NRC6 3674 aaKnown RBP18.6■□□□□ 0.57
VPS52-215ENST00000464425 ATG2AQ2TAZ0 1938 aa18.6■□□□□ 0.57
VPS52-215ENST00000464425 TDRD15B5MCY1 1934 aaKnown RBP18.59■□□□□ 0.57
VPS52-215ENST00000464425 MEFVO15553 781 aaPredicted RBP18.59■□□□□ 0.57
VPS52-215ENST00000464425 NCK2O43639 380 aa18.59■□□□□ 0.57
VPS52-215ENST00000464425 PRPF6O94906 941 aaKnown RBP18.59■□□□□ 0.57
VPS52-215ENST00000464425 TNFSF9P41273 254 aa18.59■□□□□ 0.57
VPS52-215ENST00000464425 KCNQ1P51787 676 aa18.59■□□□□ 0.57
VPS52-215ENST00000464425 CUL4BQ13620 913 aa18.59■□□□□ 0.57
VPS52-215ENST00000464425 BMS1Q14692 1282 aaKnown RBP18.59■□□□□ 0.57
VPS52-215ENST00000464425 NAB2Q15742 525 aa18.59■□□□□ 0.57
VPS52-215ENST00000464425 SLC10A6Q3KNW5 377 aa18.59■□□□□ 0.57
VPS52-215ENST00000464425 ZBTB41Q5SVQ8 909 aa18.59■□□□□ 0.57
VPS52-215ENST00000464425 KANK3Q6NY19 840 aa18.59■□□□□ 0.57
VPS52-215ENST00000464425 TAS1R1Q7RTX1 841 aa18.59■□□□□ 0.57
VPS52-215ENST00000464425 HVCN1Q96D96 273 aa18.59■□□□□ 0.57
VPS52-215ENST00000464425 PAGE5Q96GU1 130 aa18.59■□□□□ 0.57
VPS52-215ENST00000464425 SNX27Q96L92 541 aa18.59■□□□□ 0.57
VPS52-215ENST00000464425 TIGD1Q96MW7 591 aa18.59■□□□□ 0.57
VPS52-215ENST00000464425 ZMAT2Q96NC0 199 aaKnown RBP18.59■□□□□ 0.57
VPS52-215ENST00000464425 PPP1R10Q96QC0 940 aaKnown RBP18.59■□□□□ 0.57
VPS52-215ENST00000464425 ACCSQ96QU6 501 aa18.59■□□□□ 0.57
VPS52-215ENST00000464425 MSTO1Q9BUK6 570 aa18.59■□□□□ 0.57
VPS52-215ENST00000464425 ZBP1Q9H171 429 aa18.59■□□□□ 0.57
VPS52-215ENST00000464425 A0A0B4J269 797 aa18.58■□□□□ 0.56
VPS52-215ENST00000464425 C2orf71A6NGG8 1288 aa18.58■□□□□ 0.56
VPS52-215ENST00000464425 H3BQ06 376 aaPredicted RBP18.58■□□□□ 0.56
VPS52-215ENST00000464425 TADA2AO75478 443 aa18.58■□□□□ 0.56
VPS52-215ENST00000464425 MYL1P05976 194 aa18.58■□□□□ 0.56
VPS52-215ENST00000464425 CLTAP09496 248 aa18.58■□□□□ 0.56
VPS52-215ENST00000464425 CXCL8P10145 99 aa18.58■□□□□ 0.56
VPS52-215ENST00000464425 CTSAP10619 480 aa18.58■□□□□ 0.56
VPS52-215ENST00000464425 RBM10P98175 930 aaKnown RBP18.58■□□□□ 0.56
VPS52-215ENST00000464425 DLX2Q07687 328 aaPredicted RBP18.58■□□□□ 0.56
VPS52-215ENST00000464425 ADAM15Q13444 863 aa18.58■□□□□ 0.56
VPS52-215ENST00000464425 HSP90AA2PQ14568 343 aaPredicted RBP18.58■□□□□ 0.56
VPS52-215ENST00000464425 COL19A1Q14993 1142 aa18.58■□□□□ 0.56
VPS52-215ENST00000464425 CTC1Q2NKJ3 1217 aa18.58■□□□□ 0.56
VPS52-215ENST00000464425 XKR4Q5GH76 650 aa18.58■□□□□ 0.56
VPS52-215ENST00000464425 L1TD1Q5T7N2 865 aaKnown RBP18.58■□□□□ 0.56
VPS52-215ENST00000464425 KRBA2Q6ZNG9 492 aa18.58■□□□□ 0.56
VPS52-215ENST00000464425 ELOA2Q8IYF1 753 aaPredicted RBP18.58■□□□□ 0.56
VPS52-215ENST00000464425 GLIS3Q8NEA6 775 aa18.58■□□□□ 0.56
VPS52-215ENST00000464425 HASPINQ8TF76 798 aa18.58■□□□□ 0.56
VPS52-215ENST00000464425 CCDC34Q96HJ3 373 aa18.58■□□□□ 0.56
VPS52-215ENST00000464425 EXOC7Q9UPT5 735 aa18.58■□□□□ 0.56
VPS52-215ENST00000464425 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.57■□□□□ 0.56
VPS52-215ENST00000464425 C2CD2LO14523 706 aa18.57■□□□□ 0.56
VPS52-215ENST00000464425 OGTO15294 1046 aa18.57■□□□□ 0.56
VPS52-215ENST00000464425 LTBRP36941 435 aa18.57■□□□□ 0.56
VPS52-215ENST00000464425 SPAG1Q07617 926 aa18.57■□□□□ 0.56
VPS52-215ENST00000464425 DUSP6Q16828 381 aa18.57■□□□□ 0.56
VPS52-215ENST00000464425 AAK1Q2M2I8 961 aa18.57■□□□□ 0.56
VPS52-215ENST00000464425 SLFN12LQ6IEE8 588 aa18.57■□□□□ 0.56
VPS52-215ENST00000464425 UNC13DQ70J99 1090 aa18.57■□□□□ 0.56
VPS52-215ENST00000464425 SYCP3Q8IZU3 236 aa18.57■□□□□ 0.56
VPS52-215ENST00000464425 EFHBQ8N7U6 833 aa18.57■□□□□ 0.56
VPS52-215ENST00000464425 B3GALT6Q96L58 329 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms