RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 HNRNPLP14866 589 aaKnown RBP eCLIP5.37□□□□□ -1.55
USH2A-203ENST00000463147 ZFP36P26651 326 aaKnown RBP5.37□□□□□ -1.55
USH2A-203ENST00000463147 ZNF174Q15697 407 aa5.37□□□□□ -1.55
USH2A-203ENST00000463147 C1orf162Q8NEQ5 155 aaPredicted RBP5.37□□□□□ -1.55
USH2A-203ENST00000463147 CAGE1Q8TC20 777 aa5.37□□□□□ -1.55
USH2A-203ENST00000463147 HIST1H2AHQ96KK5 128 aa5.37□□□□□ -1.55
USH2A-203ENST00000463147 HIST1H2AJQ99878 128 aa5.37□□□□□ -1.55
USH2A-203ENST00000463147 ENKD1Q9H0I2 346 aa5.37□□□□□ -1.55
USH2A-203ENST00000463147 AKIP1Q9NQ31 210 aa5.37□□□□□ -1.55
USH2A-203ENST00000463147 OXSMQ9NWU1 459 aa5.37□□□□□ -1.55
USH2A-203ENST00000463147 TRPM5Q9NZQ8 1165 aa5.37□□□□□ -1.55
USH2A-203ENST00000463147 ZBTB21Q9ULJ3 1066 aa5.37□□□□□ -1.55
USH2A-203ENST00000463147 LUC7L2Q9Y383 392 aaKnown RBP5.37□□□□□ -1.55
USH2A-203ENST00000463147 LCHNA4D1U4 455 aa5.36□□□□□ -1.55
USH2A-203ENST00000463147 GAS7O60861 476 aa5.36□□□□□ -1.55
USH2A-203ENST00000463147 STC2O76061 302 aa5.36□□□□□ -1.55
USH2A-203ENST00000463147 KRT18P05783 430 aaKnown RBP5.36□□□□□ -1.55
USH2A-203ENST00000463147 SPATA31D3P0C874 917 aa5.36□□□□□ -1.55
USH2A-203ENST00000463147 TYRP1P17643 537 aa5.36□□□□□ -1.55
USH2A-203ENST00000463147 CXCR5P32302 372 aa5.36□□□□□ -1.55
USH2A-203ENST00000463147 MXRA7P84157 204 aa5.36□□□□□ -1.55
USH2A-203ENST00000463147 GUCY1B3Q02153 619 aa5.36□□□□□ -1.55
USH2A-203ENST00000463147 ADCY2Q08462 1091 aa5.36□□□□□ -1.55
USH2A-203ENST00000463147 ABHD17BQ5VST6 288 aa5.36□□□□□ -1.55
USH2A-203ENST00000463147 ARMC6Q6NXE6 501 aa5.36□□□□□ -1.55
USH2A-203ENST00000463147 SPATA31D4Q6ZUB0 917 aa5.36□□□□□ -1.55
USH2A-203ENST00000463147 PHYKPLQ8IUZ5 450 aa5.36□□□□□ -1.55
USH2A-203ENST00000463147 CMTR2Q8IYT2 770 aaKnown RBP5.36□□□□□ -1.55
USH2A-203ENST00000463147 UNC5BQ8IZJ1 945 aa5.36□□□□□ -1.55
USH2A-203ENST00000463147 CPA6Q8N4T0 437 aa5.36□□□□□ -1.55
USH2A-203ENST00000463147 TIFAQ96CG3 184 aa5.36□□□□□ -1.55
USH2A-203ENST00000463147 FAXDC2Q96IV6 333 aa5.36□□□□□ -1.55
USH2A-203ENST00000463147 SLC13A1Q9BZW2 595 aa5.36□□□□□ -1.55
USH2A-203ENST00000463147 ZNF768Q9H5H4 540 aaKnown RBP5.36□□□□□ -1.55
USH2A-203ENST00000463147 TCF7L1Q9HCS4 588 aa5.36□□□□□ -1.55
USH2A-203ENST00000463147 ANLNQ9NQW6 1124 aa5.36□□□□□ -1.55
USH2A-203ENST00000463147 C14orf119Q9NWQ9 140 aa5.36□□□□□ -1.55
USH2A-203ENST00000463147 OBP2AQ9NY56 170 aa5.36□□□□□ -1.55
USH2A-203ENST00000463147 ANKFY1Q9P2R3 1169 aa5.36□□□□□ -1.55
USH2A-203ENST00000463147 ZKSCAN5Q9Y2L8 839 aa5.36□□□□□ -1.55
USH2A-203ENST00000463147 EPN1Q9Y6I3 576 aaPredicted RBP5.36□□□□□ -1.55
USH2A-203ENST00000463147 POLR2AP24928 1970 aaKnown RBP5.36□□□□□ -1.55
USH2A-203ENST00000463147 PIPSLA2A3N6 862 aa5.35□□□□□ -1.55
USH2A-203ENST00000463147 VSTM5A8MXK1 200 aa5.35□□□□□ -1.55
USH2A-203ENST00000463147 H7C1D1 291 aa5.35□□□□□ -1.55
USH2A-203ENST00000463147 LPXNO60711 386 aa5.35□□□□□ -1.55
USH2A-203ENST00000463147 KRT37O76014 449 aa5.35□□□□□ -1.55
USH2A-203ENST00000463147 MYL1P05976 194 aa5.35□□□□□ -1.55
USH2A-203ENST00000463147 RBP3P10745 1247 aa5.35□□□□□ -1.55
USH2A-203ENST00000463147 KPNA1P52294 538 aaPredicted RBP5.35□□□□□ -1.55
USH2A-203ENST00000463147 SEC24CP53992 1094 aa5.35□□□□□ -1.55
USH2A-203ENST00000463147 KLF1Q13351 362 aaPredicted RBP5.35□□□□□ -1.55
USH2A-203ENST00000463147 MRPL49Q13405 166 aaKnown RBP5.35□□□□□ -1.55
USH2A-203ENST00000463147 GALEQ14376 348 aa5.35□□□□□ -1.55
USH2A-203ENST00000463147 SART3Q15020 963 aaKnown RBP5.35□□□□□ -1.55
USH2A-203ENST00000463147 BROXQ5VW32 411 aa5.35□□□□□ -1.55
USH2A-203ENST00000463147 KSR2Q6VAB6 950 aa5.35□□□□□ -1.55
USH2A-203ENST00000463147 DGKHQ86XP1 1220 aa5.35□□□□□ -1.55
USH2A-203ENST00000463147 BOLLQ8N9W6 283 aaKnown RBP5.35□□□□□ -1.55
USH2A-203ENST00000463147 OR5M3Q8NGP4 307 aa5.35□□□□□ -1.55
USH2A-203ENST00000463147 SLC5A5Q92911 643 aa5.35□□□□□ -1.55
USH2A-203ENST00000463147 IL17RAQ96F46 866 aa5.35□□□□□ -1.55
USH2A-203ENST00000463147 AHCYL2Q96HN2 611 aaKnown RBP5.35□□□□□ -1.55
USH2A-203ENST00000463147 CABP5Q9NP86 173 aa5.35□□□□□ -1.55
USH2A-203ENST00000463147 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.34□□□□□ -1.55
USH2A-203ENST00000463147 ULK1O75385 1050 aa5.34□□□□□ -1.55
USH2A-203ENST00000463147 PF4V1P10720 104 aa5.34□□□□□ -1.55
USH2A-203ENST00000463147 CTGFP29279 349 aa5.34□□□□□ -1.55
USH2A-203ENST00000463147 APOBEC3AP31941 199 aaPredicted RBP5.34□□□□□ -1.55
USH2A-203ENST00000463147 LRRC32Q14392 662 aa5.34□□□□□ -1.55
USH2A-203ENST00000463147 GFOD2Q3B7J2 385 aa5.34□□□□□ -1.55
USH2A-203ENST00000463147 BEAN1Q3B7T3 259 aa5.34□□□□□ -1.55
USH2A-203ENST00000463147 CXorf57Q6NSI4 855 aaKnown RBP5.34□□□□□ -1.55
USH2A-203ENST00000463147 SLC4A10Q6U841 1118 aa5.34□□□□□ -1.55
USH2A-203ENST00000463147 EPM2AIP1Q7L775 607 aaPredicted RBP5.34□□□□□ -1.55
USH2A-203ENST00000463147 KANSL1Q7Z3B3 1105 aa5.34□□□□□ -1.55
USH2A-203ENST00000463147 LILRA3Q8N6C8 439 aaPredicted RBP5.34□□□□□ -1.55
USH2A-203ENST00000463147 C7orf31Q8N865 590 aa5.34□□□□□ -1.55
USH2A-203ENST00000463147 SIMC1Q8NDZ2 872 aa5.34□□□□□ -1.55
USH2A-203ENST00000463147 EVI5LQ96CN4 794 aa5.34□□□□□ -1.55
USH2A-203ENST00000463147 MPHOSPH6Q99547 160 aaKnown RBP5.34□□□□□ -1.55
USH2A-203ENST00000463147 SLC12A5Q9H2X9 1139 aa5.34□□□□□ -1.55
USH2A-203ENST00000463147 TOPORSQ9NS56 1045 aaPredicted RBP5.34□□□□□ -1.55
USH2A-203ENST00000463147 DKK2Q9UBU2 259 aa5.34□□□□□ -1.55
USH2A-203ENST00000463147 DDX20Q9UHI6 824 aaKnown RBP5.34□□□□□ -1.55
USH2A-203ENST00000463147 PRR5-ARHGAP8B1AHC4 643 aa5.33□□□□□ -1.56
USH2A-203ENST00000463147 NCR1O76036 304 aa5.33□□□□□ -1.56
USH2A-203ENST00000463147 ALDH1A2O94788 518 aa5.33□□□□□ -1.56
USH2A-203ENST00000463147 ZRANB2O95218 330 aaKnown RBP eCLIP5.33□□□□□ -1.56
USH2A-203ENST00000463147 NDUFA10O95299 355 aa5.33□□□□□ -1.56
USH2A-203ENST00000463147 GAAP10253 952 aa5.33□□□□□ -1.56
USH2A-203ENST00000463147 SLC9A1P19634 815 aa5.33□□□□□ -1.56
USH2A-203ENST00000463147 LPOP22079 712 aaPredicted RBP5.33□□□□□ -1.56
USH2A-203ENST00000463147 MGAT1P26572 445 aa5.33□□□□□ -1.56
USH2A-203ENST00000463147 GPR3P46089 330 aa5.33□□□□□ -1.56
USH2A-203ENST00000463147 GZMKP49863 264 aa5.33□□□□□ -1.56
USH2A-203ENST00000463147 SCAND1P57086 179 aa5.33□□□□□ -1.56
USH2A-203ENST00000463147 KRTAP10-9P60411 292 aa5.33□□□□□ -1.56
USH2A-203ENST00000463147 MYBPC3Q14896 1274 aa5.33□□□□□ -1.56
USH2A-203ENST00000463147 PDCD1Q15116 288 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms