RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 POLR3CQ9BUI4 534 aaPredicted RBP16.7■□□□□ 0.26
SMC4-204ENST00000462787 PDE5AO76074 875 aa16.7■□□□□ 0.26
SMC4-204ENST00000462787 SUSD4Q5VX71 490 aa16.7■□□□□ 0.26
SMC4-204ENST00000462787 TMEM270Q6UE05 265 aa16.7■□□□□ 0.26
SMC4-204ENST00000462787 DCLK2Q8N568 766 aa16.7■□□□□ 0.26
SMC4-204ENST00000462787 SH3RF3Q8TEJ3 882 aaPredicted RBP16.7■□□□□ 0.26
SMC4-204ENST00000462787 PBXIP1Q96AQ6 731 aa16.7■□□□□ 0.26
SMC4-204ENST00000462787 CCT7Q99832 543 aa16.7■□□□□ 0.26
SMC4-204ENST00000462787 ADPGKQ9BRR6 497 aa16.7■□□□□ 0.26
SMC4-204ENST00000462787 EPB41L4AQ9HCS5 686 aaPredicted RBP16.7■□□□□ 0.26
SMC4-204ENST00000462787 ADGRB2O60241 1585 aa16.7■□□□□ 0.26
SMC4-204ENST00000462787 ABCA9Q8IUA7 1624 aa16.7■□□□□ 0.26
SMC4-204ENST00000462787 CYP26A1O43174 497 aa16.7■□□□□ 0.26
SMC4-204ENST00000462787 ZCCHC18P0CG32 403 aa16.7■□□□□ 0.26
SMC4-204ENST00000462787 SMARCA1P28370 1054 aa16.7■□□□□ 0.26
SMC4-204ENST00000462787 ALDH5A1P51649 535 aaPredicted RBP16.7■□□□□ 0.26
SMC4-204ENST00000462787 TRIM67Q6ZTA4 783 aa16.7■□□□□ 0.26
SMC4-204ENST00000462787 PASD1Q8IV76 773 aa16.7■□□□□ 0.26
SMC4-204ENST00000462787 RPS6KC1Q96S38 1066 aa16.7■□□□□ 0.26
SMC4-204ENST00000462787 MKNK1Q9BUB5 465 aa16.7■□□□□ 0.26
SMC4-204ENST00000462787 HEY2Q9UBP5 337 aa16.7■□□□□ 0.26
SMC4-204ENST00000462787 SATB2Q9UPW6 733 aa16.7■□□□□ 0.26
SMC4-204ENST00000462787 FXR2P51116 673 aaKnown RBP eCLIP16.69■□□□□ 0.262e-10■■■■■ 37.2
SMC4-204ENST00000462787 ERVK-9P63128 1117 aa16.69■□□□□ 0.26
SMC4-204ENST00000462787 ITGB3BPQ13352 177 aaPredicted RBP16.69■□□□□ 0.26
SMC4-204ENST00000462787 TMEM259Q4ZIN3 620 aa16.69■□□□□ 0.26
SMC4-204ENST00000462787 STK32AQ8WU08 396 aa16.69■□□□□ 0.26
SMC4-204ENST00000462787 MTMR8Q96EF0 704 aa16.69■□□□□ 0.26
SMC4-204ENST00000462787 FAM210AQ96ND0 272 aa16.69■□□□□ 0.26
SMC4-204ENST00000462787 DEAF1O75398 565 aaPredicted RBP16.69■□□□□ 0.26
SMC4-204ENST00000462787 SCNN1DP51172 638 aa16.69■□□□□ 0.26
SMC4-204ENST00000462787 TFAMQ00059 246 aaKnown RBP16.69■□□□□ 0.26
SMC4-204ENST00000462787 PRPF39Q86UA1 669 aaKnown RBP16.69■□□□□ 0.26
SMC4-204ENST00000462787 FBXL13Q8NEE6 735 aa16.69■□□□□ 0.26
SMC4-204ENST00000462787 SLC9A2Q9UBY0 812 aa16.69■□□□□ 0.26
SMC4-204ENST00000462787 ARHGAP26Q9UNA1 814 aa16.69■□□□□ 0.26
SMC4-204ENST00000462787 SYCE1LA8MT33 242 aa16.69■□□□□ 0.26
SMC4-204ENST00000462787 USP17L15C9J2P7 530 aa16.69■□□□□ 0.26
SMC4-204ENST00000462787 USP17L13C9JLJ4 530 aa16.69■□□□□ 0.26
SMC4-204ENST00000462787 USP17L11C9JVI0 530 aa16.69■□□□□ 0.26
SMC4-204ENST00000462787 USP17L18D6R9N7 530 aa16.69■□□□□ 0.26
SMC4-204ENST00000462787 USP17L22D6RA61 530 aa16.69■□□□□ 0.26
SMC4-204ENST00000462787 USP17L17D6RBQ6 530 aa16.69■□□□□ 0.26
SMC4-204ENST00000462787 USP17L19D6RCP7 530 aa16.69■□□□□ 0.26
SMC4-204ENST00000462787 USP17L20D6RJB6 530 aa16.69■□□□□ 0.26
SMC4-204ENST00000462787 IL10P22301 178 aa16.69■□□□□ 0.26
SMC4-204ENST00000462787 ZNF200P98182 395 aaPredicted RBP16.69■□□□□ 0.26
SMC4-204ENST00000462787 USP17L24Q0WX57 530 aa16.69■□□□□ 0.26
SMC4-204ENST00000462787 USP17L6PQ6QN14 398 aa16.69■□□□□ 0.26
SMC4-204ENST00000462787 EME1Q96AY2 570 aa16.69■□□□□ 0.26
SMC4-204ENST00000462787 TSC22D4Q9Y3Q8 395 aa16.69■□□□□ 0.26
SMC4-204ENST00000462787 SUPT3HO75486 399 aa16.69■□□□□ 0.26
SMC4-204ENST00000462787 MAP4P27816 1152 aaKnown RBP16.69■□□□□ 0.26
SMC4-204ENST00000462787 SERPINB9P50453 376 aa16.69■□□□□ 0.26
SMC4-204ENST00000462787 TFDP1Q14186 410 aa16.69■□□□□ 0.26
SMC4-204ENST00000462787 KIF19Q2TAC6 998 aa16.69■□□□□ 0.26
SMC4-204ENST00000462787 ERFEQ4G0M1 354 aa16.69■□□□□ 0.26
SMC4-204ENST00000462787 PKD2L2Q9NZM6 624 aa16.69■□□□□ 0.26
SMC4-204ENST00000462787 STX18Q9P2W9 335 aaKnown RBP16.69■□□□□ 0.26
SMC4-204ENST00000462787 NXF1Q9UBU9 619 aaKnown RBP16.69■□□□□ 0.26
SMC4-204ENST00000462787 CHMP2BQ9UQN3 213 aa16.69■□□□□ 0.26
SMC4-204ENST00000462787 WDR46O15213 610 aaKnown RBP16.68■□□□□ 0.26
SMC4-204ENST00000462787 CYP27B1O15528 508 aa16.68■□□□□ 0.26
SMC4-204ENST00000462787 SERPINB10P48595 397 aa16.68■□□□□ 0.26
SMC4-204ENST00000462787 PTENP60484 403 aa16.68■□□□□ 0.26
SMC4-204ENST00000462787 SNRNP27Q8WVK2 155 aaKnown RBP16.68■□□□□ 0.26
SMC4-204ENST00000462787 FKBP6O75344 327 aa16.68■□□□□ 0.26
SMC4-204ENST00000462787 KCNA4P22459 653 aa16.68■□□□□ 0.26
SMC4-204ENST00000462787 GNA15P30679 374 aa16.68■□□□□ 0.26
SMC4-204ENST00000462787 STAT3P40763 770 aa16.68■□□□□ 0.26
SMC4-204ENST00000462787 GEMIN4P57678 1058 aaKnown RBP16.68■□□□□ 0.26
SMC4-204ENST00000462787 HLFQ16534 295 aa16.68■□□□□ 0.26
SMC4-204ENST00000462787 NEDD1Q8NHV4 660 aa16.68■□□□□ 0.26
SMC4-204ENST00000462787 MAGEC3Q8TD91 643 aa16.68■□□□□ 0.26
SMC4-204ENST00000462787 DHX38Q92620 1227 aaKnown RBP16.68■□□□□ 0.26
SMC4-204ENST00000462787 USP6NLQ92738 828 aa16.68■□□□□ 0.26
SMC4-204ENST00000462787 INTS13Q9NVM9 706 aa16.68■□□□□ 0.26
SMC4-204ENST00000462787 DTNAQ9Y4J8 743 aa16.68■□□□□ 0.26
SMC4-204ENST00000462787 HOXA13P31271 388 aaPredicted RBP16.68■□□□□ 0.26
SMC4-204ENST00000462787 SLC34A1Q06495 639 aa16.68■□□□□ 0.26
SMC4-204ENST00000462787 FAM160B1Q5W0V3 765 aa16.68■□□□□ 0.26
SMC4-204ENST00000462787 CENPPQ6IPU0 288 aa16.68■□□□□ 0.26
SMC4-204ENST00000462787 CEP95Q96GE4 821 aa16.68■□□□□ 0.26
SMC4-204ENST00000462787 CORO1CQ9ULV4 474 aaPredicted RBP16.68■□□□□ 0.26
SMC4-204ENST00000462787 ZSCAN5CA6NGD5 496 aaPredicted RBP16.68■□□□□ 0.26
SMC4-204ENST00000462787 COPB2P35606 906 aa16.68■□□□□ 0.26
SMC4-204ENST00000462787 PTK7Q13308 1070 aa16.68■□□□□ 0.26
SMC4-204ENST00000462787 KIF22Q14807 665 aa16.68■□□□□ 0.26
SMC4-204ENST00000462787 DAGLBQ8NCG7 672 aa16.68■□□□□ 0.26
SMC4-204ENST00000462787 APOL6Q9BWW8 343 aa16.68■□□□□ 0.26
SMC4-204ENST00000462787 LOC102724428A0A0B4J2F2 783 aa16.67■□□□□ 0.26
SMC4-204ENST00000462787 ATP4AP20648 1035 aa16.67■□□□□ 0.26
SMC4-204ENST00000462787 TYK2P29597 1187 aa16.67■□□□□ 0.26
SMC4-204ENST00000462787 SIK1P57059 783 aa16.67■□□□□ 0.26
SMC4-204ENST00000462787 SCUBE1Q8IWY4 988 aa16.67■□□□□ 0.26
SMC4-204ENST00000462787 DDX17Q92841 729 aaKnown RBP16.67■□□□□ 0.26
SMC4-204ENST00000462787 C18orf8Q96DM3 657 aa16.67■□□□□ 0.26
SMC4-204ENST00000462787 MSTO1Q9BUK6 570 aa16.67■□□□□ 0.26
SMC4-204ENST00000462787 CDC42EP4Q9H3Q1 356 aaKnown RBP16.67■□□□□ 0.26
SMC4-204ENST00000462787 PALMDQ9NP74 551 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms