RNA–Protein interactions for RNA: ENST00000462256.5

DDX39B-215, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 4,027 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-215ENST00000462256 GCLMP48507 274 aa9.98□□□□□ -0.81
DDX39B-215ENST00000462256 CLK2P49760 499 aaKnown RBP9.98□□□□□ -0.81
DDX39B-215ENST00000462256 MFAP3P55082 362 aa9.98□□□□□ -0.81
DDX39B-215ENST00000462256 CREMQ03060 361 aa9.98□□□□□ -0.81
DDX39B-215ENST00000462256 EXOC3L4Q17RC7 722 aa9.98□□□□□ -0.81
DDX39B-215ENST00000462256 PPM1LQ5SGD2 360 aa9.98□□□□□ -0.81
DDX39B-215ENST00000462256 IGSF22Q8N9C0 903 aa9.98□□□□□ -0.81
DDX39B-215ENST00000462256 ACSF2Q96CM8 615 aaPredicted RBP9.98□□□□□ -0.81
DDX39B-215ENST00000462256 SAMD11Q96NU1 681 aa9.98□□□□□ -0.81
DDX39B-215ENST00000462256 FERMT1Q9BQL6 677 aa9.98□□□□□ -0.81
DDX39B-215ENST00000462256 CNTNAP2Q9UHC6 1331 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 RBM47A0AV96 593 aaKnown RBP9.97□□□□□ -0.81
DDX39B-215ENST00000462256 GRIK1P39086 918 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 NOP2P46087 812 aaKnown RBP9.97□□□□□ -0.81
DDX39B-215ENST00000462256 ATAT1Q5SQI0 421 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 MAP3K21Q5TCX8 1036 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 LLGL2Q6P1M3 1020 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 C4orf50Q6ZRC1 276 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 CHAMP1Q96JM3 812 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 PDLIM2Q96JY6 352 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 C16orf70Q9BSU1 422 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 APOL5Q9BWW9 433 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 BCAS3Q9H6U6 928 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 PDLIM7Q9NR12 457 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 CLDND1Q9NY35 253 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 TAB2Q9NYJ8 693 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 EOMESO95936 686 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 CTNNA2P26232 953 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 CTGFP29279 349 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 VAMP7P51809 220 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 CAPSQ13938 189 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 MORC3Q14149 939 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 SLC35G1Q2M3R5 365 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 USP41Q3LFD5 358 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 ZSCAN23Q3MJ62 389 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 ZNF394Q53GI3 561 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 DCUN1D2Q6PH85 259 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 SND1Q7KZF4 910 aaKnown RBP eCLIP9.97□□□□□ -0.81
DDX39B-215ENST00000462256 PALB2Q86YC2 1186 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 GUF1Q8N442 669 aaKnown RBP9.97□□□□□ -0.81
DDX39B-215ENST00000462256 SPC24Q8NBT2 197 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 UPF3AQ9H1J1 476 aaKnown RBP9.97□□□□□ -0.81
DDX39B-215ENST00000462256 NKX2-4Q9H2Z4 354 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 ABI2Q9NYB9 513 aaPredicted RBP9.97□□□□□ -0.81
DDX39B-215ENST00000462256 STK39Q9UEW8 545 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 SLC12A6Q9UHW9 1150 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 DSEQ9UL01 958 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 MYH1P12882 1939 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 OPLAHO14841 1288 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 EXTL3O43909 919 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 C22orf31O95567 290 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 POLR2BP30876 1174 aaKnown RBP9.97□□□□□ -0.81
DDX39B-215ENST00000462256 YWHAHQ04917 246 aaPredicted RBP9.97□□□□□ -0.81
DDX39B-215ENST00000462256 MAPRE1Q15691 268 aaKnown RBP9.97□□□□□ -0.81
DDX39B-215ENST00000462256 NFE2Q16621 373 aaPredicted RBP9.97□□□□□ -0.81
DDX39B-215ENST00000462256 VWA3BQ502W6 1294 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 LHX8Q68G74 356 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 SHC4Q6S5L8 630 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 KLHDC9Q8NEP7 349 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 RBSNQ9H1K0 784 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 TRPC7Q9HCX4 862 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 DPP3Q9NY33 737 aa9.97□□□□□ -0.81
DDX39B-215ENST00000462256 AFPP02771 609 aaKnown RBP9.96□□□□□ -0.81
DDX39B-215ENST00000462256 EPHB3P54753 998 aa9.96□□□□□ -0.81
DDX39B-215ENST00000462256 SNRNP35Q16560 246 aaKnown RBP9.96□□□□□ -0.81
DDX39B-215ENST00000462256 TIGD5Q53EQ6 642 aa9.96□□□□□ -0.81
DDX39B-215ENST00000462256 ZNF513Q8N8E2 541 aaPredicted RBP9.96□□□□□ -0.81
DDX39B-215ENST00000462256 MRPS31Q92665 395 aaKnown RBP9.96□□□□□ -0.81
DDX39B-215ENST00000462256 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.96□□□□□ -0.819e-25■■■□□ 16.8
DDX39B-215ENST00000462256 STIM2Q9P246 746 aa9.96□□□□□ -0.81
DDX39B-215ENST00000462256 STRIP2Q9ULQ0 834 aa9.96□□□□□ -0.81
DDX39B-215ENST00000462256 PTPRZ1P23471 2315 aaPredicted RBP9.96□□□□□ -0.81
DDX39B-215ENST00000462256 PDXKO00764 312 aa9.96□□□□□ -0.82
DDX39B-215ENST00000462256 SARSP49591 514 aaKnown RBP9.96□□□□□ -0.82
DDX39B-215ENST00000462256 SNRPFP62306 86 aaKnown RBP9.96□□□□□ -0.82
DDX39B-215ENST00000462256 HERC6Q8IVU3 1022 aa9.96□□□□□ -0.82
DDX39B-215ENST00000462256 VPS52Q8N1B4 723 aa9.96□□□□□ -0.82
DDX39B-215ENST00000462256 MED7O43513 233 aa9.96□□□□□ -0.82
DDX39B-215ENST00000462256 PDGFRBP09619 1106 aa9.96□□□□□ -0.82
DDX39B-215ENST00000462256 CXCL8P10145 99 aa9.96□□□□□ -0.82
DDX39B-215ENST00000462256 GRIK3Q13003 919 aa9.96□□□□□ -0.82
DDX39B-215ENST00000462256 KRT39Q6A163 491 aa9.96□□□□□ -0.82
DDX39B-215ENST00000462256 OVOS1Q6IE37 1185 aa9.96□□□□□ -0.82
DDX39B-215ENST00000462256 CCDC149Q6ZUS6 474 aa9.96□□□□□ -0.82
DDX39B-215ENST00000462256 FAM126BQ8IXS8 530 aa9.96□□□□□ -0.82
DDX39B-215ENST00000462256 MORC4Q8TE76 937 aa9.96□□□□□ -0.82
DDX39B-215ENST00000462256 C7orf25Q9BPX7 421 aa9.96□□□□□ -0.82
DDX39B-215ENST00000462256 PDE11AQ9HCR9 933 aa9.96□□□□□ -0.82
DDX39B-215ENST00000462256 VAV3Q9UKW4 847 aa9.96□□□□□ -0.82
DDX39B-215ENST00000462256 LUC7L2Q9Y383 392 aaKnown RBP9.96□□□□□ -0.82
DDX39B-215ENST00000462256 UMODL1Q5DID0 1318 aa9.96□□□□□ -0.82
DDX39B-215ENST00000462256 CYB561D2O14569 222 aa9.95□□□□□ -0.82
DDX39B-215ENST00000462256 DAPK3O43293 454 aa9.95□□□□□ -0.82
DDX39B-215ENST00000462256 GLUD1P00367 558 aa9.95□□□□□ -0.82
DDX39B-215ENST00000462256 ARF4P18085 180 aaPredicted RBP9.95□□□□□ -0.82
DDX39B-215ENST00000462256 STAT1P42224 750 aa9.95□□□□□ -0.82
DDX39B-215ENST00000462256 RSPH1Q8WYR4 309 aa9.95□□□□□ -0.82
DDX39B-215ENST00000462256 HPDLQ96IR7 371 aa9.95□□□□□ -0.82
DDX39B-215ENST00000462256 SLITRK1Q96PX8 696 aa9.95□□□□□ -0.82
DDX39B-215ENST00000462256 DHX33Q9H6R0 707 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms