RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 AJAP1Q9UKB5 411 aaPredicted RBP3.91□□□□□ -1.78
VCL-203ENST00000461383 OGDHLQ9ULD0 1010 aa3.91□□□□□ -1.78
VCL-203ENST00000461383 A0A088AWK7 358 aa3.9□□□□□ -1.79
VCL-203ENST00000461383 C2orf78A6NCI8 922 aa3.9□□□□□ -1.79
VCL-203ENST00000461383 IFRD1O00458 451 aaPredicted RBP3.9□□□□□ -1.79
VCL-203ENST00000461383 PHGDHO43175 533 aaKnown RBP3.9□□□□□ -1.79
VCL-203ENST00000461383 TEX33O43247 280 aa3.9□□□□□ -1.79
VCL-203ENST00000461383 ADCY6O43306 1168 aa3.9□□□□□ -1.79
VCL-203ENST00000461383 FOSP01100 380 aaPredicted RBP3.9□□□□□ -1.79
VCL-203ENST00000461383 JUNP05412 331 aaKnown RBP3.9□□□□□ -1.79
VCL-203ENST00000461383 ZNF888P0CJ79 500 aaPredicted RBP3.9□□□□□ -1.79
VCL-203ENST00000461383 RAP2AP10114 183 aa3.9□□□□□ -1.79
VCL-203ENST00000461383 TYRP14679 529 aa3.9□□□□□ -1.79
VCL-203ENST00000461383 IL2RBP14784 551 aa3.9□□□□□ -1.79
VCL-203ENST00000461383 BRAFP15056 766 aa3.9□□□□□ -1.79
VCL-203ENST00000461383 ZKSCAN1P17029 563 aaPredicted RBP3.9□□□□□ -1.79
VCL-203ENST00000461383 DDCP20711 480 aa3.9□□□□□ -1.79
VCL-203ENST00000461383 SLC7A1P30825 629 aa3.9□□□□□ -1.79
VCL-203ENST00000461383 SLC6A9P48067 706 aa3.9□□□□□ -1.79
VCL-203ENST00000461383 PLS1Q14651 629 aa3.9□□□□□ -1.79
VCL-203ENST00000461383 SSPNQ14714 243 aa3.9□□□□□ -1.79
VCL-203ENST00000461383 GRAMD1BQ3KR37 738 aa3.9□□□□□ -1.79
VCL-203ENST00000461383 ZNF385BQ569K4 471 aa3.9□□□□□ -1.79
VCL-203ENST00000461383 KHDC1LQ5JSQ8 128 aa3.9□□□□□ -1.79
VCL-203ENST00000461383 PRR31Q5SQ13 230 aa3.9□□□□□ -1.79
VCL-203ENST00000461383 RALYLQ86SE5 291 aaKnown RBP3.9□□□□□ -1.79
VCL-203ENST00000461383 ZDHHC14Q8IZN3 488 aa3.9□□□□□ -1.79
VCL-203ENST00000461383 KLHL36Q8N4N3 616 aa3.9□□□□□ -1.79
VCL-203ENST00000461383 ANKRD53Q8N9V6 530 aa3.9□□□□□ -1.79
VCL-203ENST00000461383 OR14K1Q8NGZ2 314 aa3.9□□□□□ -1.79
VCL-203ENST00000461383 MDM1Q8TC05 714 aa3.9□□□□□ -1.79
VCL-203ENST00000461383 ZNF526Q8TF50 670 aaPredicted RBP3.9□□□□□ -1.79
VCL-203ENST00000461383 HOXB13Q92826 284 aaPredicted RBP3.9□□□□□ -1.79
VCL-203ENST00000461383 PGBD4Q96DM1 585 aa3.9□□□□□ -1.79
VCL-203ENST00000461383 SLC39A13Q96H72 371 aa3.9□□□□□ -1.79
VCL-203ENST00000461383 AJUBAQ96IF1 538 aa3.9□□□□□ -1.79
VCL-203ENST00000461383 RPL10LQ96L21 214 aaKnown RBP3.9□□□□□ -1.79
VCL-203ENST00000461383 YTHDC1Q96MU7 727 aaKnown RBP3.9□□□□□ -1.79
VCL-203ENST00000461383 SAMD11Q96NU1 681 aa3.9□□□□□ -1.79
VCL-203ENST00000461383 NT5C1BQ96P26 610 aa3.9□□□□□ -1.79
VCL-203ENST00000461383 KATNBL1Q9H079 304 aa3.9□□□□□ -1.79
VCL-203ENST00000461383 WDCPQ9H6R7 721 aa3.9□□□□□ -1.79
VCL-203ENST00000461383 ZMAT3Q9HA38 289 aaKnown RBP3.9□□□□□ -1.79
VCL-203ENST00000461383 ZNF287Q9HBT7 754 aa3.9□□□□□ -1.79
VCL-203ENST00000461383 KIAA1586Q9HCI6 787 aa3.9□□□□□ -1.79
VCL-203ENST00000461383 PLCB1Q9NQ66 1216 aa3.9□□□□□ -1.79
VCL-203ENST00000461383 CORO2BQ9UQ03 480 aa3.9□□□□□ -1.79
VCL-203ENST00000461383 RUVBL1Q9Y265 456 aaKnown RBP3.9□□□□□ -1.79
VCL-203ENST00000461383 SIK3Q9Y2K2 1263 aa3.9□□□□□ -1.79
VCL-203ENST00000461383 KCTD3Q9Y597 815 aa3.9□□□□□ -1.79
VCL-203ENST00000461383 CTDP1Q9Y5B0 961 aaPredicted RBP3.9□□□□□ -1.79
VCL-203ENST00000461383 ADAMTS20P59510 1910 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 KPNA5O15131 536 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 MTSS1O43312 755 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 NUAK1O60285 661 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 SASH1O94885 1247 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 FTH1P19P0C7X4 201 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 SETSIPP0DME0 302 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 VSIG10L2P0DP72 767 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 KITP10721 976 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 MYF5P13349 255 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 SLC5A1P13866 664 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 HOXA5P20719 270 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 MALP21145 153 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 SERPINB3P29508 390 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 CSF2RBP32927 897 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 KCNJ5P48544 419 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 NKX6-1P78426 367 aaPredicted RBP3.89□□□□□ -1.79
VCL-203ENST00000461383 ATP2C1P98194 919 aaPredicted RBP3.89□□□□□ -1.79
VCL-203ENST00000461383 PTH1RQ03431 593 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 TLE1Q04724 770 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 BTKQ06187 659 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 CHAF1AQ13111 956 aaPredicted RBP3.89□□□□□ -1.79
VCL-203ENST00000461383 STK3Q13188 491 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 FLYWCH1Q4VC44 716 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 SWSAP1Q6NVH7 229 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 APOA5Q6Q788 366 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 TOGARAM2Q6ZUX3 1019 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 SAPCD2Q86UD0 394 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 FAM124AQ86V42 546 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 MYLK4Q86YV6 388 aaPredicted RBP3.89□□□□□ -1.79
VCL-203ENST00000461383 TRMT2AQ8IZ69 625 aaKnown RBP3.89□□□□□ -1.79
VCL-203ENST00000461383 CARFQ8N187 725 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 ZGPATQ8N5A5 531 aaKnown RBP3.89□□□□□ -1.79
VCL-203ENST00000461383 TXNDC5Q8NBS9 432 aaKnown RBP3.89□□□□□ -1.79
VCL-203ENST00000461383 REPS2Q8NFH8 660 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 PLBD2Q8NHP8 589 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 IFI44Q8TCB0 444 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 CASKIN2Q8WXE0 1202 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 TNPO1Q92973 898 aaKnown RBP3.89□□□□□ -1.79
VCL-203ENST00000461383 ARL8AQ96BM9 186 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 IL17RAQ96F46 866 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 LCORQ96JN0 433 aaPredicted RBP3.89□□□□□ -1.79
VCL-203ENST00000461383 MRGPRX4Q96LA9 322 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 PTPN18Q99952 460 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 C22orf23Q9BZE7 217 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 SLC6A15Q9H2J7 730 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 ARFGAP3Q9NP61 516 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 SLAMF7Q9NQ25 335 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 JADE2Q9NQC1 790 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms