RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 PEX2P28328 305 aa6.84□□□□□ -1.31
CCDC50-203ENST00000460064 GJA9P57773 515 aa6.84□□□□□ -1.31
CCDC50-203ENST00000460064 CTXN1P60606 82 aa6.84□□□□□ -1.31
CCDC50-203ENST00000460064 RAC3P60763 192 aa6.84□□□□□ -1.31
CCDC50-203ENST00000460064 ADAM8P78325 824 aa6.84□□□□□ -1.31
CCDC50-203ENST00000460064 SP140Q13342 867 aa6.84□□□□□ -1.31
CCDC50-203ENST00000460064 MTM1Q13496 603 aa6.84□□□□□ -1.31
CCDC50-203ENST00000460064 FLYWCH1Q4VC44 716 aa6.84□□□□□ -1.31
CCDC50-203ENST00000460064 FAM47AQ5JRC9 791 aa6.84□□□□□ -1.31
CCDC50-203ENST00000460064 SWSAP1Q6NVH7 229 aa6.84□□□□□ -1.31
CCDC50-203ENST00000460064 BORAQ6PGQ7 559 aa6.84□□□□□ -1.31
CCDC50-203ENST00000460064 ZNF572Q7Z3I7 529 aaPredicted RBP6.84□□□□□ -1.31
CCDC50-203ENST00000460064 POU5F2Q8N7G0 328 aa6.84□□□□□ -1.31
CCDC50-203ENST00000460064 CASKIN2Q8WXE0 1202 aa6.84□□□□□ -1.31
CCDC50-203ENST00000460064 STRBPQ96SI9 672 aaKnown RBP6.84□□□□□ -1.31
CCDC50-203ENST00000460064 ELAC2Q9BQ52 826 aaKnown RBP6.84□□□□□ -1.31
CCDC50-203ENST00000460064 FEZ2Q9UHY8 353 aaPredicted RBP6.84□□□□□ -1.31
CCDC50-203ENST00000460064 TPCN1Q9ULQ1 816 aa6.84□□□□□ -1.31
CCDC50-203ENST00000460064 PHTF1Q9UMS5 762 aa6.84□□□□□ -1.31
CCDC50-203ENST00000460064 RUVBL1Q9Y265 456 aaKnown RBP6.84□□□□□ -1.31
CCDC50-203ENST00000460064 PCDHA1Q9Y5I3 950 aa6.84□□□□□ -1.31
CCDC50-203ENST00000460064 TEX33O43247 280 aa6.83□□□□□ -1.32
CCDC50-203ENST00000460064 SLC26A4O43511 780 aa6.83□□□□□ -1.32
CCDC50-203ENST00000460064 NOBOXO60393 691 aa6.83□□□□□ -1.32
CCDC50-203ENST00000460064 B4GALT3O60512 393 aa6.83□□□□□ -1.32
CCDC50-203ENST00000460064 SLC5A1P13866 664 aa6.83□□□□□ -1.32
CCDC50-203ENST00000460064 GZMKP49863 264 aa6.83□□□□□ -1.32
CCDC50-203ENST00000460064 CREMQ03060 361 aa6.83□□□□□ -1.32
CCDC50-203ENST00000460064 ZNF124Q15973 351 aa6.83□□□□□ -1.32
CCDC50-203ENST00000460064 ATP2B3Q16720 1220 aa6.83□□□□□ -1.32
CCDC50-203ENST00000460064 AFMIDQ63HM1 303 aa6.83□□□□□ -1.32
CCDC50-203ENST00000460064 MORC4Q8TE76 937 aa6.83□□□□□ -1.32
CCDC50-203ENST00000460064 CFHR4Q92496 578 aa6.83□□□□□ -1.32
CCDC50-203ENST00000460064 IL17RAQ96F46 866 aa6.83□□□□□ -1.32
CCDC50-203ENST00000460064 NUP62CLQ9H1M0 184 aa6.83□□□□□ -1.32
CCDC50-203ENST00000460064 WDCPQ9H6R7 721 aa6.83□□□□□ -1.32
CCDC50-203ENST00000460064 ZMAT3Q9HA38 289 aaKnown RBP6.83□□□□□ -1.32
CCDC50-203ENST00000460064 SARS2Q9NP81 518 aaKnown RBP6.83□□□□□ -1.32
CCDC50-203ENST00000460064 IL23AQ9NPF7 189 aa6.83□□□□□ -1.32
CCDC50-203ENST00000460064 CPA4Q9UI42 421 aa6.83□□□□□ -1.32
CCDC50-203ENST00000460064 RIPOR2Q9Y4F9 1068 aa6.83□□□□□ -1.32
CCDC50-203ENST00000460064 A0A1W2PPL8 197 aa6.82□□□□□ -1.32
CCDC50-203ENST00000460064 WNT10BO00744 389 aa6.82□□□□□ -1.32
CCDC50-203ENST00000460064 LDHAP00338 332 aaKnown RBP6.82□□□□□ -1.32
CCDC50-203ENST00000460064 ALOX15P16050 662 aaPredicted RBP6.82□□□□□ -1.32
CCDC50-203ENST00000460064 AK2P54819 239 aa6.82□□□□□ -1.32
CCDC50-203ENST00000460064 PTH1RQ03431 593 aa6.82□□□□□ -1.32
CCDC50-203ENST00000460064 SAFB2Q14151 953 aaKnown RBP eCLIP6.82□□□□□ -1.32
CCDC50-203ENST00000460064 MFSD14BQ5SR56 506 aa6.82□□□□□ -1.32
CCDC50-203ENST00000460064 NT5DC1Q5TFE4 455 aa6.82□□□□□ -1.32
CCDC50-203ENST00000460064 ADGRE4PQ86SQ3 457 aa6.82□□□□□ -1.32
CCDC50-203ENST00000460064 SHCBP1Q8NEM2 672 aa6.82□□□□□ -1.32
CCDC50-203ENST00000460064 ARL8AQ96BM9 186 aa6.82□□□□□ -1.32
CCDC50-203ENST00000460064 CEP95Q96GE4 821 aa6.82□□□□□ -1.32
CCDC50-203ENST00000460064 TBCBQ99426 244 aa6.82□□□□□ -1.32
CCDC50-203ENST00000460064 MYD88Q99836 296 aa6.82□□□□□ -1.32
CCDC50-203ENST00000460064 PTPN18Q99952 460 aa6.82□□□□□ -1.32
CCDC50-203ENST00000460064 TCF25Q9BQ70 676 aa6.82□□□□□ -1.32
CCDC50-203ENST00000460064 C22orf23Q9BZE7 217 aa6.82□□□□□ -1.32
CCDC50-203ENST00000460064 ENKD1Q9H0I2 346 aa6.82□□□□□ -1.32
CCDC50-203ENST00000460064 ATP6V0A4Q9HBG4 840 aa6.82□□□□□ -1.32
CCDC50-203ENST00000460064 CNNM1Q9NRU3 951 aa6.82□□□□□ -1.32
CCDC50-203ENST00000460064 RTEL1Q9NZ71 1219 aa6.82□□□□□ -1.32
CCDC50-203ENST00000460064 PCDHA6Q9UN73 950 aa6.82□□□□□ -1.32
CCDC50-203ENST00000460064 ATRNL1Q5VV63 1379 aa6.82□□□□□ -1.32
CCDC50-203ENST00000460064 A0A1W2PRX2 142 aa6.81□□□□□ -1.32
CCDC50-203ENST00000460064 PMS2P1A4D2B8 440 aa6.81□□□□□ -1.32
CCDC50-203ENST00000460064 F2RL2O00254 374 aa6.81□□□□□ -1.32
CCDC50-203ENST00000460064 MATN2O00339 956 aa6.81□□□□□ -1.32
CCDC50-203ENST00000460064 PHGDHO43175 533 aaKnown RBP6.81□□□□□ -1.32
CCDC50-203ENST00000460064 FTH1P19P0C7X4 201 aa6.81□□□□□ -1.32
CCDC50-203ENST00000460064 KITP10721 976 aa6.81□□□□□ -1.32
CCDC50-203ENST00000460064 MYF5P13349 255 aa6.81□□□□□ -1.32
CCDC50-203ENST00000460064 ALDH1A3P47895 512 aa6.81□□□□□ -1.32
CCDC50-203ENST00000460064 FLT3LGP49771 235 aa6.81□□□□□ -1.32
CCDC50-203ENST00000460064 PPP2CBP62714 309 aa6.81□□□□□ -1.32
CCDC50-203ENST00000460064 PPP2CAP67775 309 aa6.81□□□□□ -1.32
CCDC50-203ENST00000460064 MRPL49Q13405 166 aaKnown RBP6.81□□□□□ -1.32
CCDC50-203ENST00000460064 RIN1Q13671 783 aa6.81□□□□□ -1.32
CCDC50-203ENST00000460064 POLD3Q15054 466 aaPredicted RBP6.81□□□□□ -1.32
CCDC50-203ENST00000460064 KHDC1LQ5JSQ8 128 aa6.81□□□□□ -1.32
CCDC50-203ENST00000460064 APOA5Q6Q788 366 aa6.81□□□□□ -1.32
CCDC50-203ENST00000460064 ARHGEF18Q6ZSZ5 1173 aa6.81□□□□□ -1.32
CCDC50-203ENST00000460064 MORC1Q86VD1 984 aa6.81□□□□□ -1.32
CCDC50-203ENST00000460064 LGI4Q8N135 537 aa6.81□□□□□ -1.32
CCDC50-203ENST00000460064 MYOCQ99972 504 aa6.81□□□□□ -1.32
CCDC50-203ENST00000460064 LRRC27Q9C0I9 530 aa6.81□□□□□ -1.32
CCDC50-203ENST00000460064 C11orf54Q9H0W9 315 aaPredicted RBP6.81□□□□□ -1.32
CCDC50-203ENST00000460064 MYH16Q9H6N6 1097 aa6.81□□□□□ -1.32
CCDC50-203ENST00000460064 KLHL11Q9NVR0 708 aa6.81□□□□□ -1.32
CCDC50-203ENST00000460064 PLEKHD1A6NEE1 506 aa6.8□□□□□ -1.32
CCDC50-203ENST00000460064 HOXA3O43365 443 aaPredicted RBP6.8□□□□□ -1.32
CCDC50-203ENST00000460064 CDC14BO60729 498 aa6.8□□□□□ -1.32
CCDC50-203ENST00000460064 CNOT4O95628 575 aaKnown RBP6.8□□□□□ -1.32
CCDC50-203ENST00000460064 ATP5JP18859 108 aa6.8□□□□□ -1.32
CCDC50-203ENST00000460064 CR2P20023 1033 aa6.8□□□□□ -1.32
CCDC50-203ENST00000460064 PRDX5P30044 214 aa6.8□□□□□ -1.32
CCDC50-203ENST00000460064 IFIT5Q13325 482 aaKnown RBP6.8□□□□□ -1.32
CCDC50-203ENST00000460064 MORC3Q14149 939 aa6.8□□□□□ -1.32
CCDC50-203ENST00000460064 LONRF1Q17RB8 773 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms