RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 CLSTN3Q9BQT9 956 aa23.74■■□□□ 1.39
CPNE1-220ENST00000458038 PAAF1Q9BRP4 392 aa23.74■■□□□ 1.39
CPNE1-220ENST00000458038 CCDC113Q9H0I3 377 aa23.74■■□□□ 1.39
CPNE1-220ENST00000458038 SLC2A4RGQ9NR83 387 aa23.74■■□□□ 1.39
CPNE1-220ENST00000458038 STK24Q9Y6E0 443 aa23.74■■□□□ 1.39
CPNE1-220ENST00000458038 ZNF292O60281 2723 aa23.74■■□□□ 1.39
CPNE1-220ENST00000458038 EP300Q09472 2414 aaPredicted RBP23.73■■□□□ 1.39
CPNE1-220ENST00000458038 TRIP11Q15643 1979 aa23.73■■□□□ 1.39
CPNE1-220ENST00000458038 XYLBO75191 536 aa23.73■■□□□ 1.39
CPNE1-220ENST00000458038 KIF4AO95239 1232 aa23.73■■□□□ 1.39
CPNE1-220ENST00000458038 POU2F2P09086 479 aa23.73■■□□□ 1.39
CPNE1-220ENST00000458038 FOXK2Q01167 660 aa23.73■■□□□ 1.39
CPNE1-220ENST00000458038 HTR4Q13639 388 aa23.73■■□□□ 1.39
CPNE1-220ENST00000458038 NAB2Q15742 525 aa23.73■■□□□ 1.39
CPNE1-220ENST00000458038 CEP57Q86XR8 500 aa23.73■■□□□ 1.39
CPNE1-220ENST00000458038 LIMCH1Q9UPQ0 1083 aa23.73■■□□□ 1.39
CPNE1-220ENST00000458038 DMDP11532 3685 aa23.72■■□□□ 1.39
CPNE1-220ENST00000458038 TTLL13PA6NNM8 815 aa23.72■■□□□ 1.39
CPNE1-220ENST00000458038 TMEM189-UBE2V1I3L0A0 370 aa23.72■■□□□ 1.39
CPNE1-220ENST00000458038 TRAPPC10P48553 1259 aa23.72■■□□□ 1.39
CPNE1-220ENST00000458038 ZNF174Q15697 407 aa23.72■■□□□ 1.39
CPNE1-220ENST00000458038 PPM1LQ5SGD2 360 aa23.72■■□□□ 1.39
CPNE1-220ENST00000458038 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.72■■□□□ 1.39
CPNE1-220ENST00000458038 NOSTRINQ8IVI9 506 aa23.72■■□□□ 1.39
CPNE1-220ENST00000458038 HASPINQ8TF76 798 aa23.72■■□□□ 1.39
CPNE1-220ENST00000458038 BSNDQ8WZ55 320 aa23.72■■□□□ 1.39
CPNE1-220ENST00000458038 UROC1Q96N76 676 aa23.72■■□□□ 1.39
CPNE1-220ENST00000458038 TBC1D17Q9HA65 648 aa23.72■■□□□ 1.39
CPNE1-220ENST00000458038 PPP4R2Q9NY27 417 aa23.72■■□□□ 1.39
CPNE1-220ENST00000458038 RAB33AQ14088 237 aa23.71■■□□□ 1.39
CPNE1-220ENST00000458038 DCLRE1AQ6PJP8 1040 aa23.71■■□□□ 1.39
CPNE1-220ENST00000458038 GPR152Q8TDT2 470 aa23.71■■□□□ 1.39
CPNE1-220ENST00000458038 SHDQ96IW2 340 aa23.71■■□□□ 1.39
CPNE1-220ENST00000458038 SNX27Q96L92 541 aa23.71■■□□□ 1.39
CPNE1-220ENST00000458038 CACNG4Q9UBN1 327 aa23.71■■□□□ 1.39
CPNE1-220ENST00000458038 CDH7Q9ULB5 785 aa23.71■■□□□ 1.39
CPNE1-220ENST00000458038 CA14Q9ULX7 337 aa23.71■■□□□ 1.39
CPNE1-220ENST00000458038 VWA8A3KMH1 1905 aa23.71■■□□□ 1.39
CPNE1-220ENST00000458038 TRAPPC3O43617 180 aa23.7■■□□□ 1.38
CPNE1-220ENST00000458038 C8AP07357 584 aa23.7■■□□□ 1.38
CPNE1-220ENST00000458038 FXR2P51116 673 aaKnown RBP eCLIP23.7■■□□□ 1.382e-6■■■□□ 18.4
CPNE1-220ENST00000458038 HMGN5P82970 282 aaKnown RBP23.7■■□□□ 1.38
CPNE1-220ENST00000458038 GUCY1B3Q02153 619 aa23.7■■□□□ 1.38
CPNE1-220ENST00000458038 PDIA5Q14554 519 aa23.7■■□□□ 1.38
CPNE1-220ENST00000458038 ERICH6BQ5W0A0 696 aa23.7■■□□□ 1.38
CPNE1-220ENST00000458038 MTSS1LQ765P7 747 aa23.7■■□□□ 1.38
CPNE1-220ENST00000458038 GRASPQ7Z6J2 395 aaPredicted RBP23.7■■□□□ 1.38
CPNE1-220ENST00000458038 FBXO18Q8NFZ0 1043 aa23.7■■□□□ 1.38
CPNE1-220ENST00000458038 ARHGEF3Q9NR81 526 aa23.7■■□□□ 1.38
CPNE1-220ENST00000458038 SIT1Q9Y3P8 196 aa23.7■■□□□ 1.38
CPNE1-220ENST00000458038 NUMBLQ9Y6R0 609 aa23.7■■□□□ 1.38
CPNE1-220ENST00000458038 PHLPP2Q6ZVD8 1323 aa23.69■■□□□ 1.38
CPNE1-220ENST00000458038 K7ERI5 159 aa23.69■■□□□ 1.38
CPNE1-220ENST00000458038 LIG1P18858 919 aa23.69■■□□□ 1.38
CPNE1-220ENST00000458038 FGFR3P22607 806 aa23.69■■□□□ 1.38
CPNE1-220ENST00000458038 CCT6AP40227 531 aaKnown RBP23.69■■□□□ 1.38
CPNE1-220ENST00000458038 GNL2Q13823 731 aaKnown RBP23.69■■□□□ 1.38
CPNE1-220ENST00000458038 TTC38Q5R3I4 469 aa23.69■■□□□ 1.38
CPNE1-220ENST00000458038 ATF7IP2Q5U623 682 aa23.69■■□□□ 1.38
CPNE1-220ENST00000458038 RAB34Q9BZG1 259 aa23.69■■□□□ 1.38
CPNE1-220ENST00000458038 NOL7Q9UMY1 257 aaKnown RBP23.69■■□□□ 1.38
CPNE1-220ENST00000458038 GDAQ9Y2T3 454 aa23.69■■□□□ 1.38
CPNE1-220ENST00000458038 CACNA1IQ9P0X4 2223 aa23.68■■□□□ 1.38
CPNE1-220ENST00000458038 B3GAT3O94766 335 aa23.68■■□□□ 1.38
CPNE1-220ENST00000458038 ST3GAL1Q11201 340 aa23.68■■□□□ 1.38
CPNE1-220ENST00000458038 AXDND1Q5T1B0 1012 aaPredicted RBP23.68■■□□□ 1.38
CPNE1-220ENST00000458038 EEF1DP3Q658K8 133 aa23.68■■□□□ 1.38
CPNE1-220ENST00000458038 PPP1R10Q96QC0 940 aaKnown RBP23.68■■□□□ 1.38
CPNE1-220ENST00000458038 BHMT2Q9H2M3 363 aa23.68■■□□□ 1.38
CPNE1-220ENST00000458038 TOPORSQ9NS56 1045 aaPredicted RBP23.68■■□□□ 1.38
CPNE1-220ENST00000458038 MTRRQ9UBK8 725 aa23.68■■□□□ 1.38
CPNE1-220ENST00000458038 LRWD1Q9UFC0 647 aa23.68■■□□□ 1.38
CPNE1-220ENST00000458038 KCNH3Q9ULD8 1083 aa23.68■■□□□ 1.38
CPNE1-220ENST00000458038 TNFSF13BQ9Y275 285 aa23.68■■□□□ 1.38
CPNE1-220ENST00000458038 MYH15Q9Y2K3 1946 aa23.67■■□□□ 1.38
CPNE1-220ENST00000458038 OR1D2P34982 312 aa23.67■■□□□ 1.38
CPNE1-220ENST00000458038 NT5DC1Q5TFE4 455 aa23.67■■□□□ 1.38
CPNE1-220ENST00000458038 ANKS3Q6ZW76 656 aa23.67■■□□□ 1.38
CPNE1-220ENST00000458038 ADSSL1Q8N142 457 aa23.67■■□□□ 1.38
CPNE1-220ENST00000458038 DDX27Q96GQ7 796 aaKnown RBP23.67■■□□□ 1.38
CPNE1-220ENST00000458038 ZSCAN31Q96LW9 406 aaPredicted RBP23.67■■□□□ 1.38
CPNE1-220ENST00000458038 BACE2Q9Y5Z0 518 aa23.67■■□□□ 1.38
CPNE1-220ENST00000458038 CCL16O15467 120 aa23.66■■□□□ 1.38
CPNE1-220ENST00000458038 YARSP54577 528 aaKnown RBP23.66■■□□□ 1.38
CPNE1-220ENST00000458038 STARD6P59095 220 aa23.66■■□□□ 1.38
CPNE1-220ENST00000458038 ZC3H14Q6PJT7 736 aaKnown RBP23.66■■□□□ 1.38
CPNE1-220ENST00000458038 CCDC83Q8IWF9 413 aa23.66■■□□□ 1.38
CPNE1-220ENST00000458038 SLC7A14Q8TBB6 771 aa23.66■■□□□ 1.38
CPNE1-220ENST00000458038 FGF13Q92913 245 aa23.66■■□□□ 1.38
CPNE1-220ENST00000458038 SLC38A7Q9NVC3 462 aa23.66■■□□□ 1.38
CPNE1-220ENST00000458038 POLIQ9UNA4 740 aa23.66■■□□□ 1.38
CPNE1-220ENST00000458038 KIAA1024Q9UPX6 916 aa23.66■■□□□ 1.38
CPNE1-220ENST00000458038 ADAM12O43184 909 aa23.65■■□□□ 1.38
CPNE1-220ENST00000458038 EDN1P05305 212 aa23.65■■□□□ 1.38
CPNE1-220ENST00000458038 UPP1Q16831 310 aa23.65■■□□□ 1.38
CPNE1-220ENST00000458038 C4orf32Q8N8J7 132 aa23.65■■□□□ 1.38
CPNE1-220ENST00000458038 FAM184AQ8NB25 1140 aa23.65■■□□□ 1.38
CPNE1-220ENST00000458038 FGF14Q92915 247 aa23.65■■□□□ 1.38
CPNE1-220ENST00000458038 BORCS6Q96GS4 357 aa23.65■■□□□ 1.38
CPNE1-220ENST00000458038 CCDC94Q9BW85 323 aaPredicted RBP23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms