RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 HAPLN2Q9GZV7 340 aa16.02■□□□□ 0.16
VPS16-205ENST00000453689 ST6GALNAC4Q9H4F1 302 aa16.02■□□□□ 0.16
VPS16-205ENST00000453689 UBE2ZQ9H832 354 aaPredicted RBP16.02■□□□□ 0.16
VPS16-205ENST00000453689 ENTPD7Q9NQZ7 604 aa16.02■□□□□ 0.16
VPS16-205ENST00000453689 MARCH5Q9NX47 278 aa16.02■□□□□ 0.16
VPS16-205ENST00000453689 PVALEFA0A1B0GWK0 134 aa16.01■□□□□ 0.15
VPS16-205ENST00000453689 HNRNPDLO14979 420 aaKnown RBP16.01■□□□□ 0.15
VPS16-205ENST00000453689 CLDN3O15551 220 aa16.01■□□□□ 0.15
VPS16-205ENST00000453689 THP07101 528 aa16.01■□□□□ 0.15
VPS16-205ENST00000453689 ABCD1P33897 745 aa16.01■□□□□ 0.15
VPS16-205ENST00000453689 LIG4P49917 911 aa16.01■□□□□ 0.15
VPS16-205ENST00000453689 MRPS5P82675 430 aaKnown RBP16.01■□□□□ 0.15
VPS16-205ENST00000453689 MCL1Q07820 350 aa16.01■□□□□ 0.15
VPS16-205ENST00000453689 COASYQ13057 564 aa16.01■□□□□ 0.15
VPS16-205ENST00000453689 NAB2Q15742 525 aa16.01■□□□□ 0.15
VPS16-205ENST00000453689 ZNF720Q7Z2F6 126 aa16.01■□□□□ 0.15
VPS16-205ENST00000453689 TMC7Q7Z402 723 aa16.01■□□□□ 0.15
VPS16-205ENST00000453689 MAP4K3Q8IVH8 894 aa16.01■□□□□ 0.15
VPS16-205ENST00000453689 PABPC5Q96DU9 382 aaKnown RBP16.01■□□□□ 0.15
VPS16-205ENST00000453689 VN1R3Q9BXE9 311 aa16.01■□□□□ 0.15
VPS16-205ENST00000453689 CLSTN2Q9H4D0 955 aa16.01■□□□□ 0.15
VPS16-205ENST00000453689 IGFLR1Q9H665 355 aa16.01■□□□□ 0.15
VPS16-205ENST00000453689 MRPL44Q9H9J2 332 aaKnown RBP16.01■□□□□ 0.15
VPS16-205ENST00000453689 PANK4Q9NVE7 773 aa16.01■□□□□ 0.15
VPS16-205ENST00000453689 TBC1D7Q9P0N9 293 aa16.01■□□□□ 0.15
VPS16-205ENST00000453689 CACNG4Q9UBN1 327 aa16.01■□□□□ 0.15
VPS16-205ENST00000453689 PRG3Q9Y2Y8 225 aaPredicted RBP16.01■□□□□ 0.15
VPS16-205ENST00000453689 XIRP2A4UGR9 3374 aa16■□□□□ 0.15
VPS16-205ENST00000453689 HIDE1A8MVS5 230 aa16■□□□□ 0.15
VPS16-205ENST00000453689 F8W810 466 aa16■□□□□ 0.15
VPS16-205ENST00000453689 LINC01565O15544 149 aa16■□□□□ 0.15
VPS16-205ENST00000453689 PPP1R37O75864 691 aa16■□□□□ 0.15
VPS16-205ENST00000453689 MATR3P43243 847 aaKnown RBP eCLIP16■□□□□ 0.15
VPS16-205ENST00000453689 NRIP1P48552 1158 aa16■□□□□ 0.15
VPS16-205ENST00000453689 YARSP54577 528 aaKnown RBP16■□□□□ 0.15
VPS16-205ENST00000453689 PNOCQ13519 176 aa16■□□□□ 0.15
VPS16-205ENST00000453689 CTC1Q2NKJ3 1217 aa16■□□□□ 0.15
VPS16-205ENST00000453689 SEZ6Q53EL9 994 aa16■□□□□ 0.15
VPS16-205ENST00000453689 HERC4Q5GLZ8 1057 aaPredicted RBP16■□□□□ 0.15
VPS16-205ENST00000453689 GLRA4Q5JXX5 417 aa16■□□□□ 0.15
VPS16-205ENST00000453689 SLC39A4Q6P5W5 647 aa16■□□□□ 0.15
VPS16-205ENST00000453689 ALKAL1Q6UXT8 129 aa16■□□□□ 0.15
VPS16-205ENST00000453689 RBM23Q86U06 439 aaKnown RBP16■□□□□ 0.15
VPS16-205ENST00000453689 VPS52Q8N1B4 723 aa16■□□□□ 0.15
VPS16-205ENST00000453689 RABGGTAQ92696 567 aa16■□□□□ 0.15
VPS16-205ENST00000453689 CCDC47Q96A33 483 aaKnown RBP16■□□□□ 0.15
VPS16-205ENST00000453689 HVCN1Q96D96 273 aa16■□□□□ 0.15
VPS16-205ENST00000453689 ACAP3Q96P50 834 aa16■□□□□ 0.15
VPS16-205ENST00000453689 ASB2Q96Q27 587 aa16■□□□□ 0.15
VPS16-205ENST00000453689 STRA6Q9BX79 667 aa16■□□□□ 0.15
VPS16-205ENST00000453689 ZBP1Q9H171 429 aa16■□□□□ 0.15
VPS16-205ENST00000453689 NUP62CLQ9H1M0 184 aa16■□□□□ 0.15
VPS16-205ENST00000453689 TLE6Q9H808 572 aa16■□□□□ 0.15
VPS16-205ENST00000453689 NGRNQ9NPE2 291 aaKnown RBP16■□□□□ 0.15
VPS16-205ENST00000453689 OLFML3Q9NRN5 406 aa16■□□□□ 0.15
VPS16-205ENST00000453689 TOPORSQ9NS56 1045 aaPredicted RBP16■□□□□ 0.15
VPS16-205ENST00000453689 CLDND1Q9NY35 253 aa16■□□□□ 0.15
VPS16-205ENST00000453689 CASTOR2A6NHX0 329 aa15.99■□□□□ 0.15
VPS16-205ENST00000453689 ANKRD63C9JTQ0 380 aa15.99■□□□□ 0.15
VPS16-205ENST00000453689 PER2O15055 1255 aa15.99■□□□□ 0.15
VPS16-205ENST00000453689 MEFVO15553 781 aaPredicted RBP15.99■□□□□ 0.15
VPS16-205ENST00000453689 NCK2O43639 380 aa15.99■□□□□ 0.15
VPS16-205ENST00000453689 KLRC4O43908 158 aa15.99■□□□□ 0.15
VPS16-205ENST00000453689 SMC2O95347 1197 aa15.99■□□□□ 0.15
VPS16-205ENST00000453689 GCNT3O95395 438 aa15.99■□□□□ 0.15
VPS16-205ENST00000453689 RPN1P04843 607 aaKnown RBP15.99■□□□□ 0.15
VPS16-205ENST00000453689 CTSAP10619 480 aa15.99■□□□□ 0.15
VPS16-205ENST00000453689 KCNA5P22460 613 aa15.99■□□□□ 0.15
VPS16-205ENST00000453689 CASP5P51878 434 aa15.99■□□□□ 0.15
VPS16-205ENST00000453689 TUSC3Q13454 348 aa15.99■□□□□ 0.15
VPS16-205ENST00000453689 SMC1AQ14683 1233 aaKnown RBP15.99■□□□□ 0.15
VPS16-205ENST00000453689 AAK1Q2M2I8 961 aa15.99■□□□□ 0.15
VPS16-205ENST00000453689 XKR4Q5GH76 650 aa15.99■□□□□ 0.15
VPS16-205ENST00000453689 EP400NLQ6ZTU2 488 aa15.99■□□□□ 0.15
VPS16-205ENST00000453689 AUTS2Q8WXX7 1259 aa15.99■□□□□ 0.15
VPS16-205ENST00000453689 SNX27Q96L92 541 aa15.99■□□□□ 0.15
VPS16-205ENST00000453689 PPP1R10Q96QC0 940 aaKnown RBP15.99■□□□□ 0.15
VPS16-205ENST00000453689 PAAF1Q9BRP4 392 aa15.99■□□□□ 0.15
VPS16-205ENST00000453689 COLEC11Q9BWP8 271 aa15.99■□□□□ 0.15
VPS16-205ENST00000453689 FGFBP2Q9BYJ0 223 aa15.99■□□□□ 0.15
VPS16-205ENST00000453689 EXOC1Q9NV70 894 aa15.99■□□□□ 0.15
VPS16-205ENST00000453689 C2orf16Q68DN1 1984 aa15.98■□□□□ 0.15
VPS16-205ENST00000453689 SMIM28A0A1B0GU29 152 aa15.98■□□□□ 0.15
VPS16-205ENST00000453689 C2orf71A6NGG8 1288 aa15.98■□□□□ 0.15
VPS16-205ENST00000453689 TISP43B9A030 160 aa15.98■□□□□ 0.15
VPS16-205ENST00000453689 TBX10O75333 385 aa15.98■□□□□ 0.15
VPS16-205ENST00000453689 CXCL14O95715 111 aa15.98■□□□□ 0.15
VPS16-205ENST00000453689 EFEMP2O95967 443 aa15.98■□□□□ 0.15
VPS16-205ENST00000453689 MYBP10242 640 aa15.98■□□□□ 0.15
VPS16-205ENST00000453689 LTBRP36941 435 aa15.98■□□□□ 0.15
VPS16-205ENST00000453689 KCNQ1P51787 676 aa15.98■□□□□ 0.15
VPS16-205ENST00000453689 EHHADHQ08426 723 aa15.98■□□□□ 0.15
VPS16-205ENST00000453689 KCNA1Q09470 495 aa15.98■□□□□ 0.15
VPS16-205ENST00000453689 ADAM15Q13444 863 aa15.98■□□□□ 0.15
VPS16-205ENST00000453689 KCNB1Q14721 858 aa15.98■□□□□ 0.15
VPS16-205ENST00000453689 NFKBIBQ15653 356 aa15.98■□□□□ 0.15
VPS16-205ENST00000453689 CAMK4Q16566 473 aa15.98■□□□□ 0.15
VPS16-205ENST00000453689 DUSP6Q16828 381 aa15.98■□□□□ 0.15
VPS16-205ENST00000453689 KMT5BQ4FZB7 885 aa15.98■□□□□ 0.15
VPS16-205ENST00000453689 FAM26FQ5R3K3 315 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms