RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 IFT20Q8IY31 132 aa12.66□□□□□ -0.38
VTA1-203ENST00000452973 OR5B17Q8NGF7 314 aa12.66□□□□□ -0.38
VTA1-203ENST00000452973 HES6Q96HZ4 224 aa12.66□□□□□ -0.38
VTA1-203ENST00000452973 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.66□□□□□ -0.384e-6■□□□□ 9.9
VTA1-203ENST00000452973 ARID2Q68CP9 1835 aa12.66□□□□□ -0.38
VTA1-203ENST00000452973 NCANO14594 1321 aa12.66□□□□□ -0.38
VTA1-203ENST00000452973 ADCY3O60266 1144 aa12.66□□□□□ -0.38
VTA1-203ENST00000452973 DMTNQ08495 405 aa12.66□□□□□ -0.38
VTA1-203ENST00000452973 LAMTOR4Q0VGL1 99 aa12.66□□□□□ -0.38
VTA1-203ENST00000452973 DDX42Q86XP3 938 aaKnown RBP eCLIP12.66□□□□□ -0.38
VTA1-203ENST00000452973 PASD1Q8IV76 773 aa12.66□□□□□ -0.38
VTA1-203ENST00000452973 ISCUQ9H1K1 167 aa12.66□□□□□ -0.38
VTA1-203ENST00000452973 AMACRQ9UHK6 382 aa12.66□□□□□ -0.38
VTA1-203ENST00000452973 NR2E1Q9Y466 385 aa12.66□□□□□ -0.38
VTA1-203ENST00000452973 INO80B-WBP1J3KQ70 363 aa12.65□□□□□ -0.38
VTA1-203ENST00000452973 SART1O43290 800 aaKnown RBP12.65□□□□□ -0.38
VTA1-203ENST00000452973 MAFO75444 373 aaPredicted RBP12.65□□□□□ -0.38
VTA1-203ENST00000452973 FAM153BP0C7A2 387 aa12.65□□□□□ -0.38
VTA1-203ENST00000452973 GGCXP38435 758 aa12.65□□□□□ -0.38
VTA1-203ENST00000452973 MARCKSL1P49006 195 aa12.65□□□□□ -0.38
VTA1-203ENST00000452973 CLCN3P51790 818 aa12.65□□□□□ -0.38
VTA1-203ENST00000452973 SNAPC2Q13487 334 aa12.65□□□□□ -0.38
VTA1-203ENST00000452973 PSMD6Q15008 389 aa12.65□□□□□ -0.38
VTA1-203ENST00000452973 FAM153CQ494X1 144 aa12.65□□□□□ -0.38
VTA1-203ENST00000452973 SLFN12LQ6IEE8 588 aa12.65□□□□□ -0.38
VTA1-203ENST00000452973 RHOT2Q8IXI1 618 aa12.65□□□□□ -0.38
VTA1-203ENST00000452973 AENQ8WTP8 325 aaKnown RBP12.65□□□□□ -0.38
VTA1-203ENST00000452973 CPA5Q8WXQ8 436 aa12.65□□□□□ -0.38
VTA1-203ENST00000452973 ALG3Q92685 438 aa12.65□□□□□ -0.38
VTA1-203ENST00000452973 VTI1AQ96AJ9 217 aa12.65□□□□□ -0.38
VTA1-203ENST00000452973 NUP85Q9BW27 656 aa12.65□□□□□ -0.38
VTA1-203ENST00000452973 INO80BQ9C086 356 aaPredicted RBP12.65□□□□□ -0.38
VTA1-203ENST00000452973 KIAA1586Q9HCI6 787 aa12.65□□□□□ -0.38
VTA1-203ENST00000452973 FAM153AQ9UHL3 310 aa12.65□□□□□ -0.38
VTA1-203ENST00000452973 KCNG1Q9UIX4 513 aa12.65□□□□□ -0.38
VTA1-203ENST00000452973 PMM2O15305 246 aa12.65□□□□□ -0.38
VTA1-203ENST00000452973 GTF2H1P32780 548 aa12.65□□□□□ -0.38
VTA1-203ENST00000452973 CDR2Q01850 454 aa12.65□□□□□ -0.38
VTA1-203ENST00000452973 MKRN4PQ13434 485 aaPredicted RBP12.65□□□□□ -0.38
VTA1-203ENST00000452973 ZACNQ401N2 412 aa12.65□□□□□ -0.38
VTA1-203ENST00000452973 DCAF12L1Q5VU92 463 aa12.65□□□□□ -0.38
VTA1-203ENST00000452973 THNSL1Q8IYQ7 743 aa12.65□□□□□ -0.38
VTA1-203ENST00000452973 KRT35Q92764 455 aa12.65□□□□□ -0.38
VTA1-203ENST00000452973 CELF4Q9BZC1 486 aaKnown RBP12.65□□□□□ -0.38
VTA1-203ENST00000452973 TRIM31Q9BZY9 425 aa12.65□□□□□ -0.38
VTA1-203ENST00000452973 TAF1DQ9H5J8 278 aaPredicted RBP12.65□□□□□ -0.38
VTA1-203ENST00000452973 ZHX1Q9UKY1 873 aaPredicted RBP12.65□□□□□ -0.38
VTA1-203ENST00000452973 DAAM1Q9Y4D1 1078 aa12.65□□□□□ -0.38
VTA1-203ENST00000452973 PAPPA2Q9BXP8 1791 aa12.65□□□□□ -0.39
VTA1-203ENST00000452973 A0A0B4J269 797 aa12.65□□□□□ -0.39
VTA1-203ENST00000452973 PDE4CQ08493 712 aa12.65□□□□□ -0.39
VTA1-203ENST00000452973 LLGL2Q6P1M3 1020 aa12.65□□□□□ -0.39
VTA1-203ENST00000452973 TMEM270Q6UE05 265 aa12.65□□□□□ -0.39
VTA1-203ENST00000452973 ACTRT1Q8TDG2 376 aa12.65□□□□□ -0.39
VTA1-203ENST00000452973 CASKIN2Q8WXE0 1202 aa12.65□□□□□ -0.39
VTA1-203ENST00000452973 BBXQ8WY36 941 aaPredicted RBP12.65□□□□□ -0.39
VTA1-203ENST00000452973 RNPC3Q96LT9 517 aaKnown RBP12.65□□□□□ -0.39
VTA1-203ENST00000452973 ADAM21Q9UKJ8 722 aa12.65□□□□□ -0.39
VTA1-203ENST00000452973 UMODL1Q5DID0 1318 aa12.64□□□□□ -0.39
VTA1-203ENST00000452973 VNN1O95497 513 aa12.64□□□□□ -0.39
VTA1-203ENST00000452973 C4BPAP04003 597 aaKnown RBP12.64□□□□□ -0.39
VTA1-203ENST00000452973 COMTP21964 271 aa12.64□□□□□ -0.39
VTA1-203ENST00000452973 PLCB4Q15147 1175 aa12.64□□□□□ -0.39
VTA1-203ENST00000452973 GLE1Q53GS7 698 aaKnown RBP12.64□□□□□ -0.39
VTA1-203ENST00000452973 ZC3H15Q8WU90 426 aaKnown RBP12.64□□□□□ -0.39
VTA1-203ENST00000452973 RNPEPQ9H4A4 650 aa12.64□□□□□ -0.39
VTA1-203ENST00000452973 PCDHB4Q9Y5E5 795 aa12.64□□□□□ -0.39
VTA1-203ENST00000452973 GOLGA6BA6NDN3 693 aa12.64□□□□□ -0.39
VTA1-203ENST00000452973 SPOPO43791 374 aa12.64□□□□□ -0.39
VTA1-203ENST00000452973 EPHB4P54760 987 aa12.64□□□□□ -0.39
VTA1-203ENST00000452973 ZNF394Q53GI3 561 aa12.64□□□□□ -0.39
VTA1-203ENST00000452973 TSEN2Q8NCE0 465 aaKnown RBP12.64□□□□□ -0.39
VTA1-203ENST00000452973 ZNF564Q8TBZ8 553 aaPredicted RBP12.64□□□□□ -0.39
VTA1-203ENST00000452973 AFAP1L1Q8TED9 768 aa12.64□□□□□ -0.39
VTA1-203ENST00000452973 ATP8B4Q8TF62 1192 aa12.64□□□□□ -0.39
VTA1-203ENST00000452973 MAF1Q9H063 256 aa12.64□□□□□ -0.39
VTA1-203ENST00000452973 MROH8Q9H579 483 aa12.64□□□□□ -0.39
VTA1-203ENST00000452973 DNAJC25-GNG10A0A024R161 153 aa12.63□□□□□ -0.39
VTA1-203ENST00000452973 PDHXO00330 501 aa12.63□□□□□ -0.39
VTA1-203ENST00000452973 DDX3YO15523 660 aaKnown RBP12.63□□□□□ -0.39
VTA1-203ENST00000452973 B4GALT5O43286 388 aa12.63□□□□□ -0.39
VTA1-203ENST00000452973 LDHAP00338 332 aaKnown RBP12.63□□□□□ -0.39
VTA1-203ENST00000452973 PRKCBP05771 671 aa12.63□□□□□ -0.39
VTA1-203ENST00000452973 CD58P19256 250 aa12.63□□□□□ -0.39
VTA1-203ENST00000452973 TTLL4Q14679 1199 aa12.63□□□□□ -0.39
VTA1-203ENST00000452973 MAPK6Q16659 721 aa12.63□□□□□ -0.39
VTA1-203ENST00000452973 EFCAB12Q6NXP0 572 aa12.63□□□□□ -0.39
VTA1-203ENST00000452973 ARMCX2Q7L311 632 aa12.63□□□□□ -0.39
VTA1-203ENST00000452973 SCFD2Q8WU76 684 aa12.63□□□□□ -0.39
VTA1-203ENST00000452973 FAM167AQ96KS9 214 aa12.63□□□□□ -0.39
VTA1-203ENST00000452973 APOBEC3GQ9HC16 384 aaKnown RBP12.63□□□□□ -0.39
VTA1-203ENST00000452973 CNOT8Q9UFF9 292 aaKnown RBP12.63□□□□□ -0.39
VTA1-203ENST00000452973 STYXL1Q9Y6J8 313 aa12.63□□□□□ -0.39
VTA1-203ENST00000452973 GLTPD2A6NH11 291 aa12.63□□□□□ -0.39
VTA1-203ENST00000452973 ZBTB42B2RXF5 422 aa12.63□□□□□ -0.39
VTA1-203ENST00000452973 TTI1O43156 1089 aa12.63□□□□□ -0.39
VTA1-203ENST00000452973 RNF40O75150 1001 aa12.63□□□□□ -0.39
VTA1-203ENST00000452973 CST3P01034 146 aaPredicted RBP12.63□□□□□ -0.39
VTA1-203ENST00000452973 CFHP08603 1231 aa12.63□□□□□ -0.39
VTA1-203ENST00000452973 ZBTB48P10074 688 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms