RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 GSTCDQ8NEC7 633 aa15.29■□□□□ 0.04
GTF3C3-206ENST00000448539 ZNF507Q8TCN5 953 aa15.29■□□□□ 0.04
GTF3C3-206ENST00000448539 SPPL3Q8TCT6 385 aa15.29■□□□□ 0.04
GTF3C3-206ENST00000448539 MICAL1Q8TDZ2 1067 aa15.29■□□□□ 0.04
GTF3C3-206ENST00000448539 POF1BQ8WVV4 589 aa15.29■□□□□ 0.04
GTF3C3-206ENST00000448539 HAPLN2Q9GZV7 340 aa15.29■□□□□ 0.04
GTF3C3-206ENST00000448539 RPF1Q9H9Y2 349 aaKnown RBP15.29■□□□□ 0.04
GTF3C3-206ENST00000448539 REV3LO60673 3130 aa15.29■□□□□ 0.04
GTF3C3-206ENST00000448539 MYO9BQ13459 2157 aa15.28■□□□□ 0.04
GTF3C3-206ENST00000448539 TISP43B9A030 160 aa15.28■□□□□ 0.04
GTF3C3-206ENST00000448539 NRP1O14786 923 aa15.28■□□□□ 0.04
GTF3C3-206ENST00000448539 KIF20AO95235 890 aa15.28■□□□□ 0.04
GTF3C3-206ENST00000448539 SMC2O95347 1197 aa15.28■□□□□ 0.04
GTF3C3-206ENST00000448539 CXCL8P10145 99 aa15.28■□□□□ 0.04
GTF3C3-206ENST00000448539 GARTP22102 1010 aa15.28■□□□□ 0.04
GTF3C3-206ENST00000448539 PPP2R3AQ06190 1150 aa15.28■□□□□ 0.04
GTF3C3-206ENST00000448539 DSC1Q08554 894 aa15.28■□□□□ 0.04
GTF3C3-206ENST00000448539 TIGD5Q53EQ6 642 aa15.28■□□□□ 0.04
GTF3C3-206ENST00000448539 GLRA4Q5JXX5 417 aa15.28■□□□□ 0.04
GTF3C3-206ENST00000448539 ARMCX5Q6P1M9 558 aa15.28■□□□□ 0.04
GTF3C3-206ENST00000448539 EPM2AIP1Q7L775 607 aaPredicted RBP15.28■□□□□ 0.04
GTF3C3-206ENST00000448539 NELFCDQ8IXH7 590 aa15.28■□□□□ 0.04
GTF3C3-206ENST00000448539 COLGALT2Q8IYK4 626 aa15.28■□□□□ 0.04
GTF3C3-206ENST00000448539 GLIS3Q8NEA6 775 aa15.28■□□□□ 0.04
GTF3C3-206ENST00000448539 PPM1EQ8WY54 764 aa15.28■□□□□ 0.04
GTF3C3-206ENST00000448539 FAM212AQ96EL1 285 aa15.28■□□□□ 0.04
GTF3C3-206ENST00000448539 IGSF21Q96ID5 467 aa15.28■□□□□ 0.04
GTF3C3-206ENST00000448539 SNX27Q96L92 541 aa15.28■□□□□ 0.04
GTF3C3-206ENST00000448539 COLEC11Q9BWP8 271 aa15.28■□□□□ 0.04
GTF3C3-206ENST00000448539 PLEKHA5Q9HAU0 1116 aa15.28■□□□□ 0.04
GTF3C3-206ENST00000448539 PRDM6Q9NQX0 595 aa15.28■□□□□ 0.04
GTF3C3-206ENST00000448539 SLC38A7Q9NVC3 462 aa15.28■□□□□ 0.04
GTF3C3-206ENST00000448539 STK39Q9UEW8 545 aa15.28■□□□□ 0.04
GTF3C3-206ENST00000448539 LZTS1Q9Y250 596 aa15.28■□□□□ 0.04
GTF3C3-206ENST00000448539 PRG3Q9Y2Y8 225 aaPredicted RBP15.28■□□□□ 0.04
GTF3C3-206ENST00000448539 STYXL1Q9Y6J8 313 aa15.28■□□□□ 0.04
GTF3C3-206ENST00000448539 NLRC5Q86WI3 1866 aa15.27■□□□□ 0.04
GTF3C3-206ENST00000448539 SMIM28A0A1B0GU29 152 aa15.27■□□□□ 0.04
GTF3C3-206ENST00000448539 GOLGA6L22H0YM25 854 aa15.27■□□□□ 0.04
GTF3C3-206ENST00000448539 TULP1O00294 542 aaPredicted RBP15.27■□□□□ 0.04
GTF3C3-206ENST00000448539 PTGESO14684 152 aa15.27■□□□□ 0.04
GTF3C3-206ENST00000448539 RHOBTB3O94955 611 aa15.27■□□□□ 0.04
GTF3C3-206ENST00000448539 LDHAP00338 332 aaKnown RBP15.27■□□□□ 0.04
GTF3C3-206ENST00000448539 TNFSF9P41273 254 aa15.27■□□□□ 0.04
GTF3C3-206ENST00000448539 PNOCQ13519 176 aa15.27■□□□□ 0.04
GTF3C3-206ENST00000448539 KCNB1Q14721 858 aa15.27■□□□□ 0.04
GTF3C3-206ENST00000448539 CCDC85BQ15834 202 aaPredicted RBP15.27■□□□□ 0.04
GTF3C3-206ENST00000448539 CLEC17AQ6ZS10 378 aa15.27■□□□□ 0.04
GTF3C3-206ENST00000448539 HS2ST1Q7LGA3 356 aa15.27■□□□□ 0.04
GTF3C3-206ENST00000448539 CD302Q8IX05 232 aa15.27■□□□□ 0.04
GTF3C3-206ENST00000448539 NOC3LQ8WTT2 800 aaKnown RBP15.27■□□□□ 0.04
GTF3C3-206ENST00000448539 SCFD1Q8WVM8 642 aa15.27■□□□□ 0.04
GTF3C3-206ENST00000448539 PPP2R3CQ969Q6 453 aa15.27■□□□□ 0.04
GTF3C3-206ENST00000448539 IKZF4Q9H2S9 585 aa15.27■□□□□ 0.04
GTF3C3-206ENST00000448539 TLR9Q9NR96 1032 aa15.27■□□□□ 0.04
GTF3C3-206ENST00000448539 RMND1Q9NWS8 449 aa15.27■□□□□ 0.04
GTF3C3-206ENST00000448539 CNTN3Q9P232 1028 aa15.27■□□□□ 0.04
GTF3C3-206ENST00000448539 CASTOR2A6NHX0 329 aa15.26■□□□□ 0.03
GTF3C3-206ENST00000448539 KIAA0391O15091 583 aaKnown RBP15.26■□□□□ 0.03
GTF3C3-206ENST00000448539 XPOTO43592 962 aaKnown RBP15.26■□□□□ 0.03
GTF3C3-206ENST00000448539 B4GALT3O60512 393 aa15.26■□□□□ 0.03
GTF3C3-206ENST00000448539 KCNE1P15382 129 aa15.26■□□□□ 0.03
GTF3C3-206ENST00000448539 ADSSP30520 456 aa15.26■□□□□ 0.03
GTF3C3-206ENST00000448539 CA8P35219 290 aa15.26■□□□□ 0.03
GTF3C3-206ENST00000448539 ACOT2P49753 483 aa15.26■□□□□ 0.03
GTF3C3-206ENST00000448539 SNRPFP62306 86 aaKnown RBP15.26■□□□□ 0.03
GTF3C3-206ENST00000448539 STK4Q13043 487 aa15.26■□□□□ 0.03
GTF3C3-206ENST00000448539 SKIV2LQ15477 1246 aaKnown RBP15.26■□□□□ 0.03
GTF3C3-206ENST00000448539 SLC10A6Q3KNW5 377 aa15.26■□□□□ 0.03
GTF3C3-206ENST00000448539 XKR4Q5GH76 650 aa15.26■□□□□ 0.03
GTF3C3-206ENST00000448539 ZBTB41Q5SVQ8 909 aa15.26■□□□□ 0.03
GTF3C3-206ENST00000448539 PDE12Q6L8Q7 609 aaKnown RBP15.26■□□□□ 0.03
GTF3C3-206ENST00000448539 ALKAL1Q6UXT8 129 aa15.26■□□□□ 0.03
GTF3C3-206ENST00000448539 TMC7Q7Z402 723 aa15.26■□□□□ 0.03
GTF3C3-206ENST00000448539 DDX53Q86TM3 631 aaKnown RBP15.26■□□□□ 0.03
GTF3C3-206ENST00000448539 ELOA2Q8IYF1 753 aaPredicted RBP15.26■□□□□ 0.03
GTF3C3-206ENST00000448539 SMARCE1Q969G3 411 aa15.26■□□□□ 0.03
GTF3C3-206ENST00000448539 UROC1Q96N76 676 aa15.26■□□□□ 0.03
GTF3C3-206ENST00000448539 FAM213AQ9BRX8 229 aa15.26■□□□□ 0.03
GTF3C3-206ENST00000448539 PCIF1Q9H4Z3 704 aa15.26■□□□□ 0.03
GTF3C3-206ENST00000448539 NSUN3Q9H649 340 aaKnown RBP15.26■□□□□ 0.03
GTF3C3-206ENST00000448539 ENTPD7Q9NQZ7 604 aa15.26■□□□□ 0.03
GTF3C3-206ENST00000448539 CPSF3Q9UKF6 684 aaKnown RBP15.26■□□□□ 0.03
GTF3C3-206ENST00000448539 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.26■□□□□ 0.03
GTF3C3-206ENST00000448539 XIRP2A4UGR9 3374 aa15.25■□□□□ 0.03
GTF3C3-206ENST00000448539 CUL9Q8IWT3 2517 aa15.25■□□□□ 0.03
GTF3C3-206ENST00000448539 TADA2AO75478 443 aa15.25■□□□□ 0.03
GTF3C3-206ENST00000448539 DNAJB1P25685 340 aa15.25■□□□□ 0.03
GTF3C3-206ENST00000448539 POU5F1Q01860 360 aaKnown RBP15.25■□□□□ 0.03
GTF3C3-206ENST00000448539 HSP90AA2PQ14568 343 aaPredicted RBP15.25■□□□□ 0.03
GTF3C3-206ENST00000448539 ENOX2Q16206 610 aaKnown RBP15.25■□□□□ 0.03
GTF3C3-206ENST00000448539 KNOP1Q1ED39 458 aaKnown RBP15.25■□□□□ 0.03
GTF3C3-206ENST00000448539 BMT2Q1RMZ1 405 aa15.25■□□□□ 0.03
GTF3C3-206ENST00000448539 TMEM173Q86WV6 379 aaPredicted RBP15.25■□□□□ 0.03
GTF3C3-206ENST00000448539 VPS52Q8N1B4 723 aa15.25■□□□□ 0.03
GTF3C3-206ENST00000448539 KIAA0895Q8NCT3 520 aa15.25■□□□□ 0.03
GTF3C3-206ENST00000448539 GOLGA5Q8TBA6 731 aa15.25■□□□□ 0.03
GTF3C3-206ENST00000448539 SAAL1Q96ER3 474 aa15.25■□□□□ 0.03
GTF3C3-206ENST00000448539 KIF12Q96FN5 646 aa15.25■□□□□ 0.03
GTF3C3-206ENST00000448539 DDX27Q96GQ7 796 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms