RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-208ENST00000447995 EIF3JO75822 258 aaKnown RBP4.45□□□□□ -1.7
PTPN12-208ENST00000447995 NDUFB10O96000 172 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 SSBP05455 408 aaKnown RBP eCLIP4.45□□□□□ -1.7
PTPN12-208ENST00000447995 CYP3A4P08684 503 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 PLA2G4BP0C869 781 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 FCER1AP12319 257 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 GAP43P17677 238 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 MUTP22033 750 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 RPL13P26373 211 aaKnown RBP4.45□□□□□ -1.7
PTPN12-208ENST00000447995 RPA1P27694 616 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 CIITAP33076 1130 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 SLC16A2P36021 539 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 ZNF76P36508 570 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 SREBF1P36956 1147 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 ARHGAP25P42331 645 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 EPS15P42566 896 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 MMP14P50281 582 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 VAV2P52735 878 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 PMS1P54277 932 aaKnown RBP4.45□□□□□ -1.7
PTPN12-208ENST00000447995 ZP2Q05996 745 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 KLRC3Q07444 240 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 DMTNQ08495 405 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 KCNA1Q09470 495 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 TCP10Q12799 353 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 KIF5AQ12840 1032 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 NKPD1Q17RQ9 610 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 MAP9Q49MG5 647 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 HERC4Q5GLZ8 1057 aaPredicted RBP4.45□□□□□ -1.7
PTPN12-208ENST00000447995 MIIPQ5JXC2 388 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 CCDC122Q5T0U0 273 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 TTBK2Q6IQ55 1244 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 CC2D1AQ6P1N0 951 aaPredicted RBP4.45□□□□□ -1.7
PTPN12-208ENST00000447995 LRRC55Q6ZSA7 311 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 STXBP4Q6ZWJ1 553 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 CACNA2D4Q7Z3S7 1137 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 FAM160B2Q86V87 743 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 GPBP1Q86WP2 473 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 RTKN2Q8IZC4 609 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 KIAA0895Q8NCT3 520 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 NEK11Q8NG66 645 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 CHURC1Q8WUH1 139 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 HNRNPLLQ8WVV9 542 aaKnown RBP4.45□□□□□ -1.7
PTPN12-208ENST00000447995 ASB11Q8WXH4 323 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 SYN2Q92777 582 aaPredicted RBP4.45□□□□□ -1.7
PTPN12-208ENST00000447995 HAS1Q92839 578 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 SECISBP2LQ93073 1101 aaKnown RBP4.45□□□□□ -1.7
PTPN12-208ENST00000447995 ALS2CR12Q96Q35 445 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 POLR3CQ9BUI4 534 aaPredicted RBP4.45□□□□□ -1.7
PTPN12-208ENST00000447995 MXD3Q9BW11 206 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 TANGO6Q9C0B7 1094 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 TTYH3Q9C0H2 523 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 VPS33BQ9H267 617 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 DNAJC18Q9H819 358 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 NHEJ1Q9H9Q4 299 aaPredicted RBP4.45□□□□□ -1.7
PTPN12-208ENST00000447995 KCNMB3Q9NPA1 279 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 STK32BQ9NY57 414 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 FAM53CQ9NYF3 392 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 GTF2IRD1Q9UHL9 959 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 PNMA2Q9UL42 364 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 MYO6Q9UM54 1294 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 DNM3Q9UQ16 869 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 SIK3Q9Y2K2 1263 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 COL4A3BPQ9Y5P4 624 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 BAZ2BQ9UIF8 2168 aaKnown RBP4.45□□□□□ -1.7
PTPN12-208ENST00000447995 RGPD3A6NKT7 1758 aaPredicted RBP4.45□□□□□ -1.7
PTPN12-208ENST00000447995 RGPD4Q7Z3J3 1758 aa4.45□□□□□ -1.7
PTPN12-208ENST00000447995 BRWD3Q6RI45 1802 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 COL11A2P13942 1736 aaPredicted RBP4.44□□□□□ -1.7
PTPN12-208ENST00000447995 SSU72P8A0A1W2PR75 194 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 FRMD3A2A2Y4 597 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 DDTLA6NHG4 134 aaPredicted RBP4.44□□□□□ -1.7
PTPN12-208ENST00000447995 MEIS2O14770 477 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 FANCGO15287 622 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 PPIP5K2O43314 1243 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 PLA2G6O60733 806 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 ZRANB2O95218 330 aaKnown RBP eCLIP4.44□□□□□ -1.7
PTPN12-208ENST00000447995 LCA5LO95447 670 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 EYA4O95677 639 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 GH2P01242 217 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 PNMA6AP0CW24 399 aaPredicted RBP4.44□□□□□ -1.7
PTPN12-208ENST00000447995 CYP11B2P19099 503 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 NME2P22392 152 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 ANXA13P27216 316 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 ARNTP27540 789 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 CLCN7P51798 805 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 STAT2P52630 851 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 SETQ01105 290 aaPredicted RBP4.44□□□□□ -1.7
PTPN12-208ENST00000447995 AMPD2Q01433 879 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 DLGAP5Q15398 846 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 SLC9C1Q4G0N8 1177 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 ZCWPW2Q504Y3 356 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 PRR16Q569H4 304 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 SFMBT2Q5VUG0 894 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 FKBP1CQ5VVH2 108 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 FYB2Q5VWT5 728 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 PAPD7Q5XG87 772 aaKnown RBP4.44□□□□□ -1.7
PTPN12-208ENST00000447995 MAP1SQ66K74 1059 aaPredicted RBP4.44□□□□□ -1.7
PTPN12-208ENST00000447995 NCAPH2Q6IBW4 605 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 PDXDC1Q6P996 788 aa4.44□□□□□ -1.7
PTPN12-208ENST00000447995 WDR59Q6PJI9 974 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms