RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 ELOA2Q8IYF1 753 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P6-201ENST00000444896 D2HGDHQ8N465 521 aa5.85□□□□□ -1.47
HMGB3P6-201ENST00000444896 PPP1R35Q8TAP8 253 aa5.85□□□□□ -1.47
HMGB3P6-201ENST00000444896 SAMD11Q96NU1 681 aa5.85□□□□□ -1.47
HMGB3P6-201ENST00000444896 VRK1Q99986 396 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P6-201ENST00000444896 CALCOCO1Q9P1Z2 691 aa5.85□□□□□ -1.47
HMGB3P6-201ENST00000444896 DDX20Q9UHI6 824 aaKnown RBP5.85□□□□□ -1.47
HMGB3P6-201ENST00000444896 VSTM5A8MXK1 200 aa5.84□□□□□ -1.47
HMGB3P6-201ENST00000444896 PRRG2O14669 202 aa5.84□□□□□ -1.47
HMGB3P6-201ENST00000444896 MYBP10242 640 aa5.84□□□□□ -1.47
HMGB3P6-201ENST00000444896 ATF3P18847 181 aa5.84□□□□□ -1.47
HMGB3P6-201ENST00000444896 HK3P52790 923 aa5.84□□□□□ -1.47
HMGB3P6-201ENST00000444896 SNAPC2Q13487 334 aa5.84□□□□□ -1.47
HMGB3P6-201ENST00000444896 ELAVL1Q15717 326 aaKnown RBP5.84□□□□□ -1.47
HMGB3P6-201ENST00000444896 BMT2Q1RMZ1 405 aa5.84□□□□□ -1.47
HMGB3P6-201ENST00000444896 GFOD2Q3B7J2 385 aa5.84□□□□□ -1.47
HMGB3P6-201ENST00000444896 HS1BP3Q53T59 392 aa5.84□□□□□ -1.47
HMGB3P6-201ENST00000444896 C1QL3Q5VWW1 255 aa5.84□□□□□ -1.47
HMGB3P6-201ENST00000444896 MFSD5Q6N075 450 aa5.84□□□□□ -1.47
HMGB3P6-201ENST00000444896 SEM1Q6ZVN7 128 aa5.84□□□□□ -1.47
HMGB3P6-201ENST00000444896 RSPH3Q86UC2 560 aa5.84□□□□□ -1.47
HMGB3P6-201ENST00000444896 FAM83AQ86UY5 434 aa5.84□□□□□ -1.47
HMGB3P6-201ENST00000444896 ZNF808Q8N4W9 903 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P6-201ENST00000444896 MDGA1Q8NFP4 955 aa5.84□□□□□ -1.47
HMGB3P6-201ENST00000444896 CGRRF1Q99675 332 aa5.84□□□□□ -1.47
HMGB3P6-201ENST00000444896 LRFN3Q9BTN0 628 aa5.84□□□□□ -1.47
HMGB3P6-201ENST00000444896 MRI1Q9BV20 369 aa5.84□□□□□ -1.47
HMGB3P6-201ENST00000444896 CPEB1Q9BZB8 566 aaKnown RBP5.84□□□□□ -1.47
HMGB3P6-201ENST00000444896 EPC1Q9H2F5 836 aa5.84□□□□□ -1.47
HMGB3P6-201ENST00000444896 DEF6Q9H4E7 631 aa5.84□□□□□ -1.47
HMGB3P6-201ENST00000444896 OBP2AQ9NY56 170 aa5.84□□□□□ -1.47
HMGB3P6-201ENST00000444896 GABBR1Q9UBS5 961 aa5.84□□□□□ -1.47
HMGB3P6-201ENST00000444896 ST6GALNAC2Q9UJ37 374 aa5.84□□□□□ -1.47
HMGB3P6-201ENST00000444896 GOLGA6CA6NDK9 693 aa5.83□□□□□ -1.48
HMGB3P6-201ENST00000444896 GOLGA6BA6NDN3 693 aa5.83□□□□□ -1.48
HMGB3P6-201ENST00000444896 A6NNZ2 444 aa5.83□□□□□ -1.48
HMGB3P6-201ENST00000444896 PJA2O43164 708 aa5.83□□□□□ -1.48
HMGB3P6-201ENST00000444896 CTNND1O60716 968 aaKnown RBP5.83□□□□□ -1.48
HMGB3P6-201ENST00000444896 UBXN7O94888 489 aa5.83□□□□□ -1.48
HMGB3P6-201ENST00000444896 RPLP2P05387 115 aaKnown RBP5.83□□□□□ -1.48
HMGB3P6-201ENST00000444896 GOLGA6DP0CG33 693 aa5.83□□□□□ -1.48
HMGB3P6-201ENST00000444896 RAP2AP10114 183 aa5.83□□□□□ -1.48
HMGB3P6-201ENST00000444896 MALP21145 153 aa5.83□□□□□ -1.48
HMGB3P6-201ENST00000444896 COMTP21964 271 aa5.83□□□□□ -1.48
HMGB3P6-201ENST00000444896 RAB39AQ14964 217 aa5.83□□□□□ -1.48
HMGB3P6-201ENST00000444896 SPATS1Q496A3 300 aa5.83□□□□□ -1.48
HMGB3P6-201ENST00000444896 OVCH2Q7RTZ1 564 aa5.83□□□□□ -1.48
HMGB3P6-201ENST00000444896 PLXDC1Q8IUK5 500 aa5.83□□□□□ -1.48
HMGB3P6-201ENST00000444896 ZBTB34Q8NCN2 500 aa5.83□□□□□ -1.48
HMGB3P6-201ENST00000444896 C3orf20Q8ND61 904 aa5.83□□□□□ -1.48
HMGB3P6-201ENST00000444896 ST8SIA2Q92186 375 aa5.83□□□□□ -1.48
HMGB3P6-201ENST00000444896 RGMAQ96B86 450 aa5.83□□□□□ -1.48
HMGB3P6-201ENST00000444896 CPPED1Q9BRF8 314 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P6-201ENST00000444896 SMPD4Q9NXE4 827 aa5.83□□□□□ -1.48
HMGB3P6-201ENST00000444896 GOLGA6AQ9NYA3 693 aa5.83□□□□□ -1.48
HMGB3P6-201ENST00000444896 MOCS1Q9NZB8 636 aa5.83□□□□□ -1.48
HMGB3P6-201ENST00000444896 CNOT11Q9UKZ1 510 aaKnown RBP5.83□□□□□ -1.48
HMGB3P6-201ENST00000444896 RUVBL1Q9Y265 456 aaKnown RBP5.83□□□□□ -1.48
HMGB3P6-201ENST00000444896 PCDHA3Q9Y5H8 950 aa5.83□□□□□ -1.48
HMGB3P6-201ENST00000444896 NCANO14594 1321 aa5.82□□□□□ -1.48
HMGB3P6-201ENST00000444896 B5MCH6 92 aa5.82□□□□□ -1.48
HMGB3P6-201ENST00000444896 NT5C1B-RDH14C9J2C7 533 aa5.82□□□□□ -1.48
HMGB3P6-201ENST00000444896 H3BML4 177 aa5.82□□□□□ -1.48
HMGB3P6-201ENST00000444896 ERC2O15083 957 aa5.82□□□□□ -1.48
HMGB3P6-201ENST00000444896 SLC16A6O15403 523 aa5.82□□□□□ -1.48
HMGB3P6-201ENST00000444896 MFAP3LO75121 409 aa5.82□□□□□ -1.48
HMGB3P6-201ENST00000444896 TUSC2O75896 110 aa5.82□□□□□ -1.48
HMGB3P6-201ENST00000444896 FTLP02792 175 aaPredicted RBP5.82□□□□□ -1.48
HMGB3P6-201ENST00000444896 SBK3P0C264 359 aa5.82□□□□□ -1.48
HMGB3P6-201ENST00000444896 GNAT2P19087 354 aa5.82□□□□□ -1.48
HMGB3P6-201ENST00000444896 ACO1P21399 889 aaKnown RBP5.82□□□□□ -1.48
HMGB3P6-201ENST00000444896 RABGGTBP53611 331 aa5.82□□□□□ -1.48
HMGB3P6-201ENST00000444896 CLRN1P58418 232 aa5.82□□□□□ -1.48
HMGB3P6-201ENST00000444896 NKX6-1P78426 367 aaPredicted RBP5.82□□□□□ -1.48
HMGB3P6-201ENST00000444896 PTH1RQ03431 593 aa5.82□□□□□ -1.48
HMGB3P6-201ENST00000444896 NOGQ13253 232 aa5.82□□□□□ -1.48
HMGB3P6-201ENST00000444896 GALEQ14376 348 aa5.82□□□□□ -1.48
HMGB3P6-201ENST00000444896 GRM3Q14832 879 aa5.82□□□□□ -1.48
HMGB3P6-201ENST00000444896 ARHGAP29Q52LW3 1261 aa5.82□□□□□ -1.48
HMGB3P6-201ENST00000444896 CYB5RLQ6IPT4 315 aa5.82□□□□□ -1.48
HMGB3P6-201ENST00000444896 SGMS1Q86VZ5 419 aa5.82□□□□□ -1.48
HMGB3P6-201ENST00000444896 OR52N2Q8NGI0 321 aa5.82□□□□□ -1.48
HMGB3P6-201ENST00000444896 PLBD2Q8NHP8 589 aa5.82□□□□□ -1.48
HMGB3P6-201ENST00000444896 MIEF2Q96C03 454 aa5.82□□□□□ -1.48
HMGB3P6-201ENST00000444896 GPR20Q99678 358 aa5.82□□□□□ -1.48
HMGB3P6-201ENST00000444896 POLHQ9Y253 713 aa5.82□□□□□ -1.48
HMGB3P6-201ENST00000444896 TCAF1Q9Y4C2 921 aa5.82□□□□□ -1.48
HMGB3P6-201ENST00000444896 TEX33O43247 280 aa5.81□□□□□ -1.48
HMGB3P6-201ENST00000444896 B3GALT2O43825 422 aa5.81□□□□□ -1.48
HMGB3P6-201ENST00000444896 ATP5JP18859 108 aa5.81□□□□□ -1.48
HMGB3P6-201ENST00000444896 HK1P19367 917 aa5.81□□□□□ -1.48
HMGB3P6-201ENST00000444896 PTTG1IPP53801 180 aa5.81□□□□□ -1.48
HMGB3P6-201ENST00000444896 GBX1Q14549 363 aa5.81□□□□□ -1.48
HMGB3P6-201ENST00000444896 HSP90AB2PQ58FF8 381 aa5.81□□□□□ -1.48
HMGB3P6-201ENST00000444896 METTL24Q5JXM2 366 aa5.81□□□□□ -1.48
HMGB3P6-201ENST00000444896 DACT2Q5SW24 774 aa5.81□□□□□ -1.48
HMGB3P6-201ENST00000444896 THEMIS2Q5TEJ8 643 aa5.81□□□□□ -1.48
HMGB3P6-201ENST00000444896 Q6ZRM9 215 aa5.81□□□□□ -1.48
HMGB3P6-201ENST00000444896 DENND1CQ8IV53 801 aa5.81□□□□□ -1.48
HMGB3P6-201ENST00000444896 CAMKK1Q8N5S9 505 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms