RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 PPP4R2Q9NY27 417 aa15.21■□□□□ 0.03
PTPRE-203ENST00000442830 KCNG1Q9UIX4 513 aa15.21■□□□□ 0.03
PTPRE-203ENST00000442830 SPTBN4Q9H254 2564 aa15.21■□□□□ 0.02
PTPRE-203ENST00000442830 VPS13AQ96RL7 3174 aa15.2■□□□□ 0.02
PTPRE-203ENST00000442830 CASTOR2A6NHX0 329 aa15.2■□□□□ 0.02
PTPRE-203ENST00000442830 F8W810 466 aa15.2■□□□□ 0.02
PTPRE-203ENST00000442830 JAK2O60674 1132 aa15.2■□□□□ 0.02
PTPRE-203ENST00000442830 KIF4AO95239 1232 aa15.2■□□□□ 0.02
PTPRE-203ENST00000442830 CFHP08603 1231 aa15.2■□□□□ 0.02
PTPRE-203ENST00000442830 FXR2P51116 673 aaKnown RBP eCLIP15.2■□□□□ 0.02
PTPRE-203ENST00000442830 HTR4Q13639 388 aa15.2■□□□□ 0.02
PTPRE-203ENST00000442830 PDIA5Q14554 519 aa15.2■□□□□ 0.02
PTPRE-203ENST00000442830 RTP2Q5QGT7 225 aa15.2■□□□□ 0.02
PTPRE-203ENST00000442830 POTEGQ6S5H5 508 aa15.2■□□□□ 0.02
PTPRE-203ENST00000442830 ANKS3Q6ZW76 656 aa15.2■□□□□ 0.02
PTPRE-203ENST00000442830 ASCL5Q7RTU5 278 aa15.2■□□□□ 0.02
PTPRE-203ENST00000442830 CDR2LQ86X02 465 aaPredicted RBP15.2■□□□□ 0.02
PTPRE-203ENST00000442830 CEP57Q86XR8 500 aa15.2■□□□□ 0.02
PTPRE-203ENST00000442830 GLYCTKQ8IVS8 523 aa15.2■□□□□ 0.02
PTPRE-203ENST00000442830 ZSCAN31Q96LW9 406 aaPredicted RBP15.2■□□□□ 0.02
PTPRE-203ENST00000442830 TBC1D17Q9HA65 648 aa15.2■□□□□ 0.02
PTPRE-203ENST00000442830 ARHGEF3Q9NR81 526 aa15.2■□□□□ 0.02
PTPRE-203ENST00000442830 SH2B1Q9NRF2 756 aaPredicted RBP15.2■□□□□ 0.02
PTPRE-203ENST00000442830 SLC38A7Q9NVC3 462 aa15.2■□□□□ 0.02
PTPRE-203ENST00000442830 SNTG2Q9NY99 539 aa15.2■□□□□ 0.02
PTPRE-203ENST00000442830 CDH7Q9ULB5 785 aa15.2■□□□□ 0.02
PTPRE-203ENST00000442830 KCNH3Q9ULD8 1083 aa15.2■□□□□ 0.02
PTPRE-203ENST00000442830 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.2■□□□□ 0.02
PTPRE-203ENST00000442830 DOCK6Q96HP0 2047 aa15.19■□□□□ 0.02
PTPRE-203ENST00000442830 MYH11P35749 1972 aa15.19■□□□□ 0.02
PTPRE-203ENST00000442830 LAD1O00515 517 aa15.19■□□□□ 0.02
PTPRE-203ENST00000442830 PTGESO14684 152 aa15.19■□□□□ 0.02
PTPRE-203ENST00000442830 NARSO43776 548 aaKnown RBP15.19■□□□□ 0.02
PTPRE-203ENST00000442830 C8AP07357 584 aa15.19■□□□□ 0.02
PTPRE-203ENST00000442830 SPATA31D3P0C874 917 aa15.19■□□□□ 0.02
PTPRE-203ENST00000442830 MAGEA9P43362 315 aa15.19■□□□□ 0.02
PTPRE-203ENST00000442830 YARSP54577 528 aaKnown RBP15.19■□□□□ 0.02
PTPRE-203ENST00000442830 PFKPQ01813 784 aa15.19■□□□□ 0.02
PTPRE-203ENST00000442830 RAB33AQ14088 237 aa15.19■□□□□ 0.02
PTPRE-203ENST00000442830 TTC38Q5R3I4 469 aa15.19■□□□□ 0.02
PTPRE-203ENST00000442830 DCLRE1AQ6PJP8 1040 aa15.19■□□□□ 0.02
PTPRE-203ENST00000442830 PRSS55Q6UWB4 352 aaPredicted RBP15.19■□□□□ 0.02
PTPRE-203ENST00000442830 SPATA31D4Q6ZUB0 917 aa15.19■□□□□ 0.02
PTPRE-203ENST00000442830 FRMD5Q7Z6J6 570 aa15.19■□□□□ 0.02
PTPRE-203ENST00000442830 KCTD17Q8N5Z5 321 aa15.19■□□□□ 0.02
PTPRE-203ENST00000442830 FAM184AQ8NB25 1140 aa15.19■□□□□ 0.02
PTPRE-203ENST00000442830 LNX1Q8TBB1 728 aaPredicted RBP15.19■□□□□ 0.02
PTPRE-203ENST00000442830 DDX27Q96GQ7 796 aaKnown RBP15.19■□□□□ 0.02
PTPRE-203ENST00000442830 B3GALT6Q96L58 329 aa15.19■□□□□ 0.02
PTPRE-203ENST00000442830 CLSTN3Q9BQT9 956 aa15.19■□□□□ 0.02
PTPRE-203ENST00000442830 CCDC94Q9BW85 323 aaPredicted RBP15.19■□□□□ 0.02
PTPRE-203ENST00000442830 C17orf75Q9HAS0 396 aa15.19■□□□□ 0.02
PTPRE-203ENST00000442830 SIT1Q9Y3P8 196 aa15.19■□□□□ 0.02
PTPRE-203ENST00000442830 KIF3AQ9Y496 699 aa15.19■□□□□ 0.02
PTPRE-203ENST00000442830 GVINP1Q7Z2Y8 2422 aa15.19■□□□□ 0.02
PTPRE-203ENST00000442830 FANCMQ8IYD8 2048 aa15.19■□□□□ 0.02
PTPRE-203ENST00000442830 KRBA1A5PL33 1030 aa15.18■□□□□ 0.02
PTPRE-203ENST00000442830 K7ERI5 159 aa15.18■□□□□ 0.02
PTPRE-203ENST00000442830 WNT7AO00755 349 aa15.18■□□□□ 0.02
PTPRE-203ENST00000442830 RPL17P18621 184 aaKnown RBP15.18■□□□□ 0.02
PTPRE-203ENST00000442830 FGFR3P22607 806 aa15.18■□□□□ 0.02
PTPRE-203ENST00000442830 CCT6AP40227 531 aaKnown RBP15.18■□□□□ 0.02
PTPRE-203ENST00000442830 FOSBP53539 338 aa15.18■□□□□ 0.02
PTPRE-203ENST00000442830 NAB2Q15742 525 aa15.18■□□□□ 0.02
PTPRE-203ENST00000442830 ATF7IP2Q5U623 682 aa15.18■□□□□ 0.02
PTPRE-203ENST00000442830 RSPO2Q6UXX9 243 aaPredicted RBP15.18■□□□□ 0.02
PTPRE-203ENST00000442830 NOSTRINQ8IVI9 506 aa15.18■□□□□ 0.02
PTPRE-203ENST00000442830 FBXO18Q8NFZ0 1043 aa15.18■□□□□ 0.02
PTPRE-203ENST00000442830 FEZF2Q8TBJ5 459 aa15.18■□□□□ 0.02
PTPRE-203ENST00000442830 GPR152Q8TDT2 470 aa15.18■□□□□ 0.02
PTPRE-203ENST00000442830 HASPINQ8TF76 798 aa15.18■□□□□ 0.02
PTPRE-203ENST00000442830 RSAD2Q8WXG1 361 aa15.18■□□□□ 0.02
PTPRE-203ENST00000442830 SNX27Q96L92 541 aa15.18■□□□□ 0.02
PTPRE-203ENST00000442830 DRC1Q96MC2 740 aa15.18■□□□□ 0.02
PTPRE-203ENST00000442830 TIPINQ9BVW5 301 aa15.18■□□□□ 0.02
PTPRE-203ENST00000442830 MTRRQ9UBK8 725 aa15.18■□□□□ 0.02
PTPRE-203ENST00000442830 LRWD1Q9UFC0 647 aa15.18■□□□□ 0.02
PTPRE-203ENST00000442830 CA14Q9ULX7 337 aa15.18■□□□□ 0.02
PTPRE-203ENST00000442830 TNFSF13BQ9Y275 285 aa15.18■□□□□ 0.02
PTPRE-203ENST00000442830 RBM19Q9Y4C8 960 aaKnown RBP15.18■□□□□ 0.02
PTPRE-203ENST00000442830 BACE2Q9Y5Z0 518 aa15.18■□□□□ 0.02
PTPRE-203ENST00000442830 NUMBLQ9Y6R0 609 aa15.18■□□□□ 0.02
PTPRE-203ENST00000442830 PI15O43692 258 aa15.17■□□□□ 0.02
PTPRE-203ENST00000442830 B3GAT3O94766 335 aa15.17■□□□□ 0.02
PTPRE-203ENST00000442830 PRKCQQ04759 706 aa15.17■□□□□ 0.02
PTPRE-203ENST00000442830 DMP1Q13316 513 aaPredicted RBP15.17■□□□□ 0.02
PTPRE-203ENST00000442830 ZNF174Q15697 407 aa15.17■□□□□ 0.02
PTPRE-203ENST00000442830 AXDND1Q5T1B0 1012 aaPredicted RBP15.17■□□□□ 0.02
PTPRE-203ENST00000442830 GRASPQ7Z6J2 395 aaPredicted RBP15.17■□□□□ 0.02
PTPRE-203ENST00000442830 BSNDQ8WZ55 320 aa15.17■□□□□ 0.02
PTPRE-203ENST00000442830 PPP1R10Q96QC0 940 aaKnown RBP15.17■□□□□ 0.02
PTPRE-203ENST00000442830 PAAF1Q9BRP4 392 aa15.17■□□□□ 0.02
PTPRE-203ENST00000442830 BHMT2Q9H2M3 363 aa15.17■□□□□ 0.02
PTPRE-203ENST00000442830 TMEM134Q9H6X4 195 aa15.17■□□□□ 0.02
PTPRE-203ENST00000442830 DNM3Q9UQ16 869 aa15.17■□□□□ 0.02
PTPRE-203ENST00000442830 GDAQ9Y2T3 454 aa15.17■□□□□ 0.02
PTPRE-203ENST00000442830 LIG1P18858 919 aa15.16■□□□□ 0.02
PTPRE-203ENST00000442830 GRM5P41594 1212 aa15.16■□□□□ 0.02
PTPRE-203ENST00000442830 STARD6P59095 220 aa15.16■□□□□ 0.02
PTPRE-203ENST00000442830 GUCY1B3Q02153 619 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms