RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 FBXO22Q8NEZ5 403 aa17.48■□□□□ 0.39
USP39-205ENST00000442708 BCL7CQ8WUZ0 217 aaPredicted RBP17.48■□□□□ 0.39
USP39-205ENST00000442708 CCDC47Q96A33 483 aaKnown RBP17.48■□□□□ 0.39
USP39-205ENST00000442708 CLSTN2Q9H4D0 955 aa17.48■□□□□ 0.39
USP39-205ENST00000442708 HOOK1Q9UJC3 728 aaKnown RBP17.48■□□□□ 0.39
USP39-205ENST00000442708 SMIM28A0A1B0GU29 152 aa17.47■□□□□ 0.39
USP39-205ENST00000442708 TTC26A0AVF1 554 aa17.47■□□□□ 0.39
USP39-205ENST00000442708 GOLGA8IPA6NC78 632 aa17.47■□□□□ 0.39
USP39-205ENST00000442708 GOLGA8JA6NMD2 632 aa17.47■□□□□ 0.39
USP39-205ENST00000442708 NT5C1B-RDH14C9J2C7 533 aa17.47■□□□□ 0.39
USP39-205ENST00000442708 GOLGA6L22H0YM25 854 aa17.47■□□□□ 0.39
USP39-205ENST00000442708 CLIC2O15247 247 aa17.47■□□□□ 0.39
USP39-205ENST00000442708 ZC3H11AO75152 810 aaKnown RBP eCLIP17.47■□□□□ 0.39
USP39-205ENST00000442708 LAG3P18627 525 aa17.47■□□□□ 0.39
USP39-205ENST00000442708 WNT7BP56706 349 aa17.47■□□□□ 0.39
USP39-205ENST00000442708 ADGRE1Q14246 886 aa17.47■□□□□ 0.39
USP39-205ENST00000442708 ARMCX5Q6P1M9 558 aa17.47■□□□□ 0.39
USP39-205ENST00000442708 KCNT2Q6UVM3 1135 aa17.47■□□□□ 0.39
USP39-205ENST00000442708 TMEM173Q86WV6 379 aaPredicted RBP17.47■□□□□ 0.39
USP39-205ENST00000442708 COLGALT2Q8IYK4 626 aa17.47■□□□□ 0.39
USP39-205ENST00000442708 KLHL23Q8NBE8 558 aa17.47■□□□□ 0.39
USP39-205ENST00000442708 RSPH1Q8WYR4 309 aa17.47■□□□□ 0.39
USP39-205ENST00000442708 RABGGTAQ92696 567 aa17.47■□□□□ 0.39
USP39-205ENST00000442708 SAMD11Q96NU1 681 aa17.47■□□□□ 0.39
USP39-205ENST00000442708 PPP1R10Q96QC0 940 aaKnown RBP17.47■□□□□ 0.39
USP39-205ENST00000442708 FAM213AQ9BRX8 229 aa17.47■□□□□ 0.39
USP39-205ENST00000442708 RMND1Q9NWS8 449 aa17.47■□□□□ 0.39
USP39-205ENST00000442708 CNTN3Q9P232 1028 aa17.47■□□□□ 0.39
USP39-205ENST00000442708 KANSL3Q9P2N6 904 aa17.47■□□□□ 0.39
USP39-205ENST00000442708 CDH23Q9H251 3354 aa17.47■□□□□ 0.39
USP39-205ENST00000442708 REV3LO60673 3130 aa17.47■□□□□ 0.39
USP39-205ENST00000442708 LACTBL1A8MY62 500 aa17.46■□□□□ 0.39
USP39-205ENST00000442708 F8W810 466 aa17.46■□□□□ 0.39
USP39-205ENST00000442708 BIN1O00499 593 aa17.46■□□□□ 0.39
USP39-205ENST00000442708 ITGB1P05556 798 aa17.46■□□□□ 0.39
USP39-205ENST00000442708 ADRB2P07550 413 aa17.46■□□□□ 0.39
USP39-205ENST00000442708 GALTP07902 379 aa17.46■□□□□ 0.39
USP39-205ENST00000442708 KCNE1P15382 129 aa17.46■□□□□ 0.39
USP39-205ENST00000442708 PRCPP42785 496 aa17.46■□□□□ 0.39
USP39-205ENST00000442708 YARSP54577 528 aaKnown RBP17.46■□□□□ 0.39
USP39-205ENST00000442708 SOX4Q06945 474 aaPredicted RBP17.46■□□□□ 0.39
USP39-205ENST00000442708 SPAG1Q07617 926 aa17.46■□□□□ 0.39
USP39-205ENST00000442708 GRIK3Q13003 919 aa17.46■□□□□ 0.39
USP39-205ENST00000442708 ZNF658Q5TYW1 1059 aaPredicted RBP17.46■□□□□ 0.39
USP39-205ENST00000442708 C18orf25Q96B23 403 aaPredicted RBP17.46■□□□□ 0.39
USP39-205ENST00000442708 RPS6KC1Q96S38 1066 aa17.46■□□□□ 0.39
USP39-205ENST00000442708 CDX2Q99626 313 aaPredicted RBP17.46■□□□□ 0.39
USP39-205ENST00000442708 PAAF1Q9BRP4 392 aa17.46■□□□□ 0.39
USP39-205ENST00000442708 ALG13Q9NP73 1137 aaKnown RBP17.46■□□□□ 0.39
USP39-205ENST00000442708 TOPORSQ9NS56 1045 aaPredicted RBP17.46■□□□□ 0.39
USP39-205ENST00000442708 KIAA1468Q9P260 1216 aa17.46■□□□□ 0.39
USP39-205ENST00000442708 H3BNC9 293 aa17.45■□□□□ 0.38
USP39-205ENST00000442708 GRM6O15303 877 aa17.45■□□□□ 0.38
USP39-205ENST00000442708 RB1P06400 928 aa17.45■□□□□ 0.38
USP39-205ENST00000442708 THP07101 528 aa17.45■□□□□ 0.38
USP39-205ENST00000442708 CD44P16070 742 aaKnown RBP17.45■□□□□ 0.38
USP39-205ENST00000442708 IGFBP6P24592 240 aaPredicted RBP17.45■□□□□ 0.38
USP39-205ENST00000442708 DNAJB1P25685 340 aa17.45■□□□□ 0.38
USP39-205ENST00000442708 GPM6BQ13491 265 aa17.45■□□□□ 0.38
USP39-205ENST00000442708 MORC3Q14149 939 aa17.45■□□□□ 0.38
USP39-205ENST00000442708 KYAT1Q16773 422 aa17.45■□□□□ 0.38
USP39-205ENST00000442708 SLC39A11Q8N1S5 342 aa17.45■□□□□ 0.38
USP39-205ENST00000442708 GUF1Q8N442 669 aaKnown RBP17.45■□□□□ 0.38
USP39-205ENST00000442708 MYLIPQ8WY64 445 aa17.45■□□□□ 0.38
USP39-205ENST00000442708 ZNF558Q96NG5 402 aa17.45■□□□□ 0.38
USP39-205ENST00000442708 PLVAPQ9BX97 442 aa17.45■□□□□ 0.38
USP39-205ENST00000442708 RPF1Q9H9Y2 349 aaKnown RBP17.45■□□□□ 0.38
USP39-205ENST00000442708 GOLGA2P5Q9HBQ8 144 aa17.45■□□□□ 0.38
USP39-205ENST00000442708 HSPBP1Q9NZL4 362 aa17.45■□□□□ 0.38
USP39-205ENST00000442708 RWDD3Q9Y3V2 267 aa17.45■□□□□ 0.38
USP39-205ENST00000442708 NRP1O14786 923 aa17.44■□□□□ 0.38
USP39-205ENST00000442708 EXTL3O43909 919 aa17.44■□□□□ 0.38
USP39-205ENST00000442708 FGF18O76093 207 aa17.44■□□□□ 0.38
USP39-205ENST00000442708 CYP2J2P51589 502 aa17.44■□□□□ 0.38
USP39-205ENST00000442708 CAMK1Q14012 370 aa17.44■□□□□ 0.38
USP39-205ENST00000442708 COBLL1Q53SF7 1204 aa17.44■□□□□ 0.38
USP39-205ENST00000442708 CBWD2Q8IUF1 395 aa17.44■□□□□ 0.38
USP39-205ENST00000442708 C12orf56Q8IXR9 622 aa17.44■□□□□ 0.38
USP39-205ENST00000442708 SPPL3Q8TCT6 385 aa17.44■□□□□ 0.38
USP39-205ENST00000442708 P2RX5Q93086 422 aa17.44■□□□□ 0.38
USP39-205ENST00000442708 FAM212AQ96EL1 285 aa17.44■□□□□ 0.38
USP39-205ENST00000442708 FAM193BQ96PV7 902 aaPredicted RBP17.44■□□□□ 0.38
USP39-205ENST00000442708 PLEKHA5Q9HAU0 1116 aa17.44■□□□□ 0.38
USP39-205ENST00000442708 AAASQ9NRG9 546 aa17.44■□□□□ 0.38
USP39-205ENST00000442708 DMAC2Q9NW81 257 aa17.44■□□□□ 0.38
USP39-205ENST00000442708 MARCH5Q9NX47 278 aa17.44■□□□□ 0.38
USP39-205ENST00000442708 PCDHB12Q9Y5F1 795 aa17.44■□□□□ 0.38
USP39-205ENST00000442708 CASTOR2A6NHX0 329 aa17.43■□□□□ 0.38
USP39-205ENST00000442708 PDXKO00764 312 aa17.43■□□□□ 0.38
USP39-205ENST00000442708 NFICP08651 508 aa17.43■□□□□ 0.38
USP39-205ENST00000442708 OR1G1P47890 313 aa17.43■□□□□ 0.38
USP39-205ENST00000442708 ALDH7A1P49419 539 aaKnown RBP17.43■□□□□ 0.38
USP39-205ENST00000442708 SNRPFP62306 86 aaKnown RBP17.43■□□□□ 0.38
USP39-205ENST00000442708 TUSC3Q13454 348 aa17.43■□□□□ 0.38
USP39-205ENST00000442708 ZBTB6Q15916 424 aa17.43■□□□□ 0.38
USP39-205ENST00000442708 ZCWPW2Q504Y3 356 aa17.43■□□□□ 0.38
USP39-205ENST00000442708 JADE1Q6IE81 842 aa17.43■□□□□ 0.38
USP39-205ENST00000442708 ADSSL1Q8N142 457 aa17.43■□□□□ 0.38
USP39-205ENST00000442708 GPD1LQ8N335 351 aa17.43■□□□□ 0.38
USP39-205ENST00000442708 NOC3LQ8WTT2 800 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms