RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 ZNF507Q8TCN5 953 aa16.41■□□□□ 0.22
CSNK1E-210ENST00000442216 PPP2R3CQ969Q6 453 aa16.41■□□□□ 0.22
CSNK1E-210ENST00000442216 PPP1R10Q96QC0 940 aaKnown RBP16.41■□□□□ 0.22
CSNK1E-210ENST00000442216 MSTO1Q9BUK6 570 aa16.41■□□□□ 0.22
CSNK1E-210ENST00000442216 COLEC11Q9BWP8 271 aa16.41■□□□□ 0.22
CSNK1E-210ENST00000442216 NGRNQ9NPE2 291 aaKnown RBP16.41■□□□□ 0.22
CSNK1E-210ENST00000442216 SLC38A7Q9NVC3 462 aa16.41■□□□□ 0.22
CSNK1E-210ENST00000442216 SMIM28A0A1B0GU29 152 aa16.4■□□□□ 0.22
CSNK1E-210ENST00000442216 KIAA0391O15091 583 aaKnown RBP16.4■□□□□ 0.22
CSNK1E-210ENST00000442216 NCK2O43639 380 aa16.4■□□□□ 0.22
CSNK1E-210ENST00000442216 ADRB2P07550 413 aa16.4■□□□□ 0.22
CSNK1E-210ENST00000442216 HARSP12081 509 aaKnown RBP16.4■□□□□ 0.22
CSNK1E-210ENST00000442216 GARTP22102 1010 aa16.4■□□□□ 0.22
CSNK1E-210ENST00000442216 CASP1P29466 404 aa16.4■□□□□ 0.22
CSNK1E-210ENST00000442216 OR1G1P47890 313 aa16.4■□□□□ 0.22
CSNK1E-210ENST00000442216 SNRPFP62306 86 aaKnown RBP16.4■□□□□ 0.22
CSNK1E-210ENST00000442216 KCNA1Q09470 495 aa16.4■□□□□ 0.22
CSNK1E-210ENST00000442216 SNW1Q13573 536 aaKnown RBP16.4■□□□□ 0.22
CSNK1E-210ENST00000442216 SLC10A6Q3KNW5 377 aa16.4■□□□□ 0.22
CSNK1E-210ENST00000442216 CD302Q8IX05 232 aa16.4■□□□□ 0.22
CSNK1E-210ENST00000442216 SYCP3Q8IZU3 236 aa16.4■□□□□ 0.22
CSNK1E-210ENST00000442216 MICALL1Q8N3F8 863 aa16.4■□□□□ 0.22
CSNK1E-210ENST00000442216 CCDC47Q96A33 483 aaKnown RBP16.4■□□□□ 0.22
CSNK1E-210ENST00000442216 TIGD1Q96MW7 591 aa16.4■□□□□ 0.22
CSNK1E-210ENST00000442216 UROC1Q96N76 676 aa16.4■□□□□ 0.22
CSNK1E-210ENST00000442216 FGFBP2Q9BYJ0 223 aa16.4■□□□□ 0.22
CSNK1E-210ENST00000442216 EXOC1Q9NV70 894 aa16.4■□□□□ 0.22
CSNK1E-210ENST00000442216 CPSF3Q9UKF6 684 aaKnown RBP16.4■□□□□ 0.22
CSNK1E-210ENST00000442216 TTC26A0AVF1 554 aa16.39■□□□□ 0.21
CSNK1E-210ENST00000442216 FSD2A1L4K1 749 aa16.39■□□□□ 0.21
CSNK1E-210ENST00000442216 PRPF6O94906 941 aaKnown RBP16.39■□□□□ 0.21
CSNK1E-210ENST00000442216 LDHAP00338 332 aaKnown RBP16.39■□□□□ 0.21
CSNK1E-210ENST00000442216 ADSSP30520 456 aa16.39■□□□□ 0.21
CSNK1E-210ENST00000442216 DPYDQ12882 1025 aa16.39■□□□□ 0.21
CSNK1E-210ENST00000442216 CCDC85BQ15834 202 aaPredicted RBP16.39■□□□□ 0.21
CSNK1E-210ENST00000442216 BMT2Q1RMZ1 405 aa16.39■□□□□ 0.21
CSNK1E-210ENST00000442216 TPRNQ4KMQ1 711 aa16.39■□□□□ 0.21
CSNK1E-210ENST00000442216 CLEC17AQ6ZS10 378 aa16.39■□□□□ 0.21
CSNK1E-210ENST00000442216 TMEM173Q86WV6 379 aaPredicted RBP16.39■□□□□ 0.21
CSNK1E-210ENST00000442216 ELOA2Q8IYF1 753 aaPredicted RBP16.39■□□□□ 0.21
CSNK1E-210ENST00000442216 POMGNT1Q8WZA1 660 aa16.39■□□□□ 0.21
CSNK1E-210ENST00000442216 CXCL16Q9H2A7 254 aa16.39■□□□□ 0.21
CSNK1E-210ENST00000442216 RPF1Q9H9Y2 349 aaKnown RBP16.39■□□□□ 0.21
CSNK1E-210ENST00000442216 TSHZ2Q9NRE2 1034 aa16.39■□□□□ 0.21
CSNK1E-210ENST00000442216 MARCH5Q9NX47 278 aa16.39■□□□□ 0.21
CSNK1E-210ENST00000442216 AGO2Q9UKV8 859 aaKnown RBP16.39■□□□□ 0.21
CSNK1E-210ENST00000442216 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.38■□□□□ 0.21
CSNK1E-210ENST00000442216 RHOBTB3O94955 611 aa16.38■□□□□ 0.21
CSNK1E-210ENST00000442216 EFEMP2O95967 443 aa16.38■□□□□ 0.21
CSNK1E-210ENST00000442216 RPN1P04843 607 aaKnown RBP16.38■□□□□ 0.21
CSNK1E-210ENST00000442216 IRS1P35568 1242 aa16.38■□□□□ 0.21
CSNK1E-210ENST00000442216 ERVFC1P60507 584 aa16.38■□□□□ 0.21
CSNK1E-210ENST00000442216 PPP2R3AQ06190 1150 aa16.38■□□□□ 0.21
CSNK1E-210ENST00000442216 HSP90AA2PQ14568 343 aaPredicted RBP16.38■□□□□ 0.21
CSNK1E-210ENST00000442216 KCNB1Q14721 858 aa16.38■□□□□ 0.21
CSNK1E-210ENST00000442216 COL19A1Q14993 1142 aa16.38■□□□□ 0.21
CSNK1E-210ENST00000442216 KMT5BQ4FZB7 885 aa16.38■□□□□ 0.21
CSNK1E-210ENST00000442216 TCEAL5Q5H9L2 206 aa16.38■□□□□ 0.21
CSNK1E-210ENST00000442216 VPS52Q8N1B4 723 aa16.38■□□□□ 0.21
CSNK1E-210ENST00000442216 MICAL1Q8TDZ2 1067 aa16.38■□□□□ 0.21
CSNK1E-210ENST00000442216 PPM1EQ8WY54 764 aa16.38■□□□□ 0.21
CSNK1E-210ENST00000442216 HPS3Q969F9 1004 aa16.38■□□□□ 0.21
CSNK1E-210ENST00000442216 DDX27Q96GQ7 796 aaKnown RBP16.38■□□□□ 0.21
CSNK1E-210ENST00000442216 CDCA3Q99618 268 aaPredicted RBP16.38■□□□□ 0.21
CSNK1E-210ENST00000442216 ZBP1Q9H171 429 aa16.38■□□□□ 0.21
CSNK1E-210ENST00000442216 CGNQ9P2M7 1197 aaKnown RBP16.38■□□□□ 0.21
CSNK1E-210ENST00000442216 HOOK1Q9UJC3 728 aaKnown RBP16.38■□□□□ 0.21
CSNK1E-210ENST00000442216 ADAM28Q9UKQ2 775 aa16.38■□□□□ 0.21
CSNK1E-210ENST00000442216 COG5Q9UP83 839 aa16.38■□□□□ 0.21
CSNK1E-210ENST00000442216 PRG3Q9Y2Y8 225 aaPredicted RBP16.38■□□□□ 0.21
CSNK1E-210ENST00000442216 IRAK3Q9Y616 596 aa16.38■□□□□ 0.21
CSNK1E-210ENST00000442216 TISP43B9A030 160 aa16.37■□□□□ 0.21
CSNK1E-210ENST00000442216 TMEM189-UBE2V1I3L0A0 370 aa16.37■□□□□ 0.21
CSNK1E-210ENST00000442216 MEFVO15553 781 aaPredicted RBP16.37■□□□□ 0.21
CSNK1E-210ENST00000442216 SOD2P04179 222 aa16.37■□□□□ 0.21
CSNK1E-210ENST00000442216 CXCL8P10145 99 aa16.37■□□□□ 0.21
CSNK1E-210ENST00000442216 CTSAP10619 480 aa16.37■□□□□ 0.21
CSNK1E-210ENST00000442216 TNFSF9P41273 254 aa16.37■□□□□ 0.21
CSNK1E-210ENST00000442216 SMC1AQ14683 1233 aaKnown RBP16.37■□□□□ 0.21
CSNK1E-210ENST00000442216 ENOX2Q16206 610 aaKnown RBP16.37■□□□□ 0.21
CSNK1E-210ENST00000442216 SEZ6Q53EL9 994 aa16.37■□□□□ 0.21
CSNK1E-210ENST00000442216 GLRA4Q5JXX5 417 aa16.37■□□□□ 0.21
CSNK1E-210ENST00000442216 TMC7Q7Z402 723 aa16.37■□□□□ 0.21
CSNK1E-210ENST00000442216 GPR65Q8IYL9 337 aa16.37■□□□□ 0.21
CSNK1E-210ENST00000442216 RNF168Q8IYW5 571 aaPredicted RBP16.37■□□□□ 0.21
CSNK1E-210ENST00000442216 GLIS3Q8NEA6 775 aa16.37■□□□□ 0.21
CSNK1E-210ENST00000442216 BCL7CQ8WUZ0 217 aaPredicted RBP16.37■□□□□ 0.21
CSNK1E-210ENST00000442216 SCFD1Q8WVM8 642 aa16.37■□□□□ 0.21
CSNK1E-210ENST00000442216 ZMAT2Q96NC0 199 aaKnown RBP16.37■□□□□ 0.21
CSNK1E-210ENST00000442216 TCF25Q9BQ70 676 aa16.37■□□□□ 0.21
CSNK1E-210ENST00000442216 ASB7Q9H672 318 aa16.37■□□□□ 0.21
CSNK1E-210ENST00000442216 SLC39A2Q9NP94 309 aa16.37■□□□□ 0.21
CSNK1E-210ENST00000442216 ENTPD7Q9NQZ7 604 aa16.37■□□□□ 0.21
CSNK1E-210ENST00000442216 SSX2IPQ9Y2D8 614 aa16.37■□□□□ 0.21
CSNK1E-210ENST00000442216 CASTOR2A6NHX0 329 aa16.36■□□□□ 0.21
CSNK1E-210ENST00000442216 XPOTO43592 962 aaKnown RBP16.36■□□□□ 0.21
CSNK1E-210ENST00000442216 KIF20AO95235 890 aa16.36■□□□□ 0.21
CSNK1E-210ENST00000442216 PRR29P0C7W0 189 aa16.36■□□□□ 0.21
CSNK1E-210ENST00000442216 CYP3A5P20815 502 aa16.36■□□□□ 0.21
CSNK1E-210ENST00000442216 RPL9P32969 192 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms