RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 POSTNQ15063 836 aa21.25■□□□□ 0.99
SEMA3B-206ENST00000439487 ALKAL1Q6UXT8 129 aa21.25■□□□□ 0.99
SEMA3B-206ENST00000439487 TMEM173Q86WV6 379 aaPredicted RBP21.25■□□□□ 0.99
SEMA3B-206ENST00000439487 SCFD1Q8WVM8 642 aa21.25■□□□□ 0.99
SEMA3B-206ENST00000439487 PPM1EQ8WY54 764 aa21.25■□□□□ 0.99
SEMA3B-206ENST00000439487 POMGNT1Q8WZA1 660 aa21.25■□□□□ 0.99
SEMA3B-206ENST00000439487 MRPL38Q96DV4 380 aaKnown RBP21.25■□□□□ 0.99
SEMA3B-206ENST00000439487 CCDC34Q96HJ3 373 aa21.25■□□□□ 0.99
SEMA3B-206ENST00000439487 SNX27Q96L92 541 aa21.25■□□□□ 0.99
SEMA3B-206ENST00000439487 TOPORSQ9NS56 1045 aaPredicted RBP21.25■□□□□ 0.99
SEMA3B-206ENST00000439487 LMCD1Q9NZU5 365 aa21.25■□□□□ 0.99
SEMA3B-206ENST00000439487 FAN1Q9Y2M0 1017 aa21.25■□□□□ 0.99
SEMA3B-206ENST00000439487 EYSQ5T1H1 3165 aa21.25■□□□□ 0.99
SEMA3B-206ENST00000439487 NRP1O14786 923 aa21.24■□□□□ 0.99
SEMA3B-206ENST00000439487 FAM189A1O60320 539 aa21.24■□□□□ 0.99
SEMA3B-206ENST00000439487 CLTAP09496 248 aa21.24■□□□□ 0.99
SEMA3B-206ENST00000439487 CXCL8P10145 99 aa21.24■□□□□ 0.99
SEMA3B-206ENST00000439487 UBE2HP62256 183 aa21.24■□□□□ 0.99
SEMA3B-206ENST00000439487 PLCB3Q01970 1234 aa21.24■□□□□ 0.99
SEMA3B-206ENST00000439487 PSMD2Q13200 908 aa21.24■□□□□ 0.99
SEMA3B-206ENST00000439487 CAMK1Q14012 370 aa21.24■□□□□ 0.99
SEMA3B-206ENST00000439487 CCDC85BQ15834 202 aaPredicted RBP21.24■□□□□ 0.99
SEMA3B-206ENST00000439487 PTPROQ16827 1216 aa21.24■□□□□ 0.99
SEMA3B-206ENST00000439487 SLC10A6Q3KNW5 377 aa21.24■□□□□ 0.99
SEMA3B-206ENST00000439487 XKR4Q5GH76 650 aa21.24■□□□□ 0.99
SEMA3B-206ENST00000439487 CLEC17AQ6ZS10 378 aa21.24■□□□□ 0.99
SEMA3B-206ENST00000439487 NELFCDQ8IXH7 590 aa21.24■□□□□ 0.99
SEMA3B-206ENST00000439487 BCL7CQ8WUZ0 217 aaPredicted RBP21.24■□□□□ 0.99
SEMA3B-206ENST00000439487 TIGD1Q96MW7 591 aa21.24■□□□□ 0.99
SEMA3B-206ENST00000439487 LMAN2LQ9H0V9 348 aa21.24■□□□□ 0.99
SEMA3B-206ENST00000439487 CACNG4Q9UBN1 327 aa21.24■□□□□ 0.99
SEMA3B-206ENST00000439487 AGO2Q9UKV8 859 aaKnown RBP21.24■□□□□ 0.99
SEMA3B-206ENST00000439487 PRG3Q9Y2Y8 225 aaPredicted RBP21.24■□□□□ 0.99
SEMA3B-206ENST00000439487 SMIM28A0A1B0GU29 152 aa21.23■□□□□ 0.99
SEMA3B-206ENST00000439487 ACOT2P49753 483 aa21.23■□□□□ 0.99
SEMA3B-206ENST00000439487 KRT17Q04695 432 aa21.23■□□□□ 0.99
SEMA3B-206ENST00000439487 TUSC3Q13454 348 aa21.23■□□□□ 0.99
SEMA3B-206ENST00000439487 NAB2Q15742 525 aa21.23■□□□□ 0.99
SEMA3B-206ENST00000439487 KYAT1Q16773 422 aa21.23■□□□□ 0.99
SEMA3B-206ENST00000439487 KIAA0895Q8NCT3 520 aa21.23■□□□□ 0.99
SEMA3B-206ENST00000439487 MAFAQ8NHW3 353 aaPredicted RBP21.23■□□□□ 0.99
SEMA3B-206ENST00000439487 RABGGTAQ92696 567 aa21.23■□□□□ 0.99
SEMA3B-206ENST00000439487 CCDC47Q96A33 483 aaKnown RBP21.23■□□□□ 0.99
SEMA3B-206ENST00000439487 TMEM169Q96HH4 297 aa21.23■□□□□ 0.99
SEMA3B-206ENST00000439487 IGSF21Q96ID5 467 aa21.23■□□□□ 0.99
SEMA3B-206ENST00000439487 PPP1R10Q96QC0 940 aaKnown RBP21.23■□□□□ 0.99
SEMA3B-206ENST00000439487 CASTOR2A6NHX0 329 aa21.22■□□□□ 0.99
SEMA3B-206ENST00000439487 RHOBTB3O94955 611 aa21.22■□□□□ 0.99
SEMA3B-206ENST00000439487 IRS1P35568 1242 aa21.22■□□□□ 0.99
SEMA3B-206ENST00000439487 UBE3AQ05086 875 aa21.22■□□□□ 0.99
SEMA3B-206ENST00000439487 ENOX2Q16206 610 aaKnown RBP21.22■□□□□ 0.99
SEMA3B-206ENST00000439487 ZSWIM2Q8NEG5 633 aa21.22■□□□□ 0.99
SEMA3B-206ENST00000439487 ERCC4Q92889 916 aaPredicted RBP21.22■□□□□ 0.99
SEMA3B-206ENST00000439487 ZMAT2Q96NC0 199 aaKnown RBP21.22■□□□□ 0.99
SEMA3B-206ENST00000439487 CBWD1Q9BRT8 395 aa21.22■□□□□ 0.99
SEMA3B-206ENST00000439487 PCIF1Q9H4Z3 704 aa21.22■□□□□ 0.99
SEMA3B-206ENST00000439487 RPF1Q9H9Y2 349 aaKnown RBP21.22■□□□□ 0.99
SEMA3B-206ENST00000439487 MARCH5Q9NX47 278 aa21.22■□□□□ 0.99
SEMA3B-206ENST00000439487 CNTN3Q9P232 1028 aa21.22■□□□□ 0.99
SEMA3B-206ENST00000439487 PUF60Q9UHX1 559 aaKnown RBP21.22■□□□□ 0.99
SEMA3B-206ENST00000439487 CPSF3Q9UKF6 684 aaKnown RBP21.22■□□□□ 0.99
SEMA3B-206ENST00000439487 UBE4BO95155 1302 aa21.22■□□□□ 0.99
SEMA3B-206ENST00000439487 PRUNE2Q8WUY3 3088 aa21.22■□□□□ 0.99
SEMA3B-206ENST00000439487 CARNS1A5YM72 827 aa21.21■□□□□ 0.99
SEMA3B-206ENST00000439487 LACTBL1A8MY62 500 aa21.21■□□□□ 0.99
SEMA3B-206ENST00000439487 F8W810 466 aa21.21■□□□□ 0.99
SEMA3B-206ENST00000439487 KINO60870 393 aaKnown RBP21.21■□□□□ 0.99
SEMA3B-206ENST00000439487 KCNE1P15382 129 aa21.21■□□□□ 0.99
SEMA3B-206ENST00000439487 GARTP22102 1010 aa21.21■□□□□ 0.99
SEMA3B-206ENST00000439487 ERVFC1P60507 584 aa21.21■□□□□ 0.99
SEMA3B-206ENST00000439487 SPAG1Q07617 926 aa21.21■□□□□ 0.99
SEMA3B-206ENST00000439487 BMT2Q1RMZ1 405 aa21.21■□□□□ 0.99
SEMA3B-206ENST00000439487 ARMCX5Q6P1M9 558 aa21.21■□□□□ 0.99
SEMA3B-206ENST00000439487 FAM212AQ96EL1 285 aa21.21■□□□□ 0.99
SEMA3B-206ENST00000439487 SAAL1Q96ER3 474 aa21.21■□□□□ 0.99
SEMA3B-206ENST00000439487 PAAF1Q9BRP4 392 aa21.21■□□□□ 0.99
SEMA3B-206ENST00000439487 TLR9Q9NR96 1032 aa21.21■□□□□ 0.99
SEMA3B-206ENST00000439487 LZTS1Q9Y250 596 aa21.21■□□□□ 0.99
SEMA3B-206ENST00000439487 PCDHGC5Q9Y5F6 944 aa21.21■□□□□ 0.99
SEMA3B-206ENST00000439487 VWA8A3KMH1 1905 aa21.2■□□□□ 0.98
SEMA3B-206ENST00000439487 TTC26A0AVF1 554 aa21.2■□□□□ 0.98
SEMA3B-206ENST00000439487 GOLGA8IPA6NC78 632 aa21.2■□□□□ 0.98
SEMA3B-206ENST00000439487 GOLGA8JA6NMD2 632 aa21.2■□□□□ 0.98
SEMA3B-206ENST00000439487 TGFB1I1O43294 461 aa21.2■□□□□ 0.98
SEMA3B-206ENST00000439487 SOX4Q06945 474 aaPredicted RBP21.2■□□□□ 0.98
SEMA3B-206ENST00000439487 KCNB1Q14721 858 aa21.2■□□□□ 0.98
SEMA3B-206ENST00000439487 CRELD2Q6UXH1 353 aaPredicted RBP21.2■□□□□ 0.98
SEMA3B-206ENST00000439487 NOC3LQ8WTT2 800 aaKnown RBP21.2■□□□□ 0.98
SEMA3B-206ENST00000439487 FAM213AQ9BRX8 229 aa21.2■□□□□ 0.98
SEMA3B-206ENST00000439487 COLEC11Q9BWP8 271 aa21.2■□□□□ 0.98
SEMA3B-206ENST00000439487 VN1R3Q9BXE9 311 aa21.2■□□□□ 0.98
SEMA3B-206ENST00000439487 PLEKHA5Q9HAU0 1116 aa21.2■□□□□ 0.98
SEMA3B-206ENST00000439487 GOLGA2P5Q9HBQ8 144 aa21.2■□□□□ 0.98
SEMA3B-206ENST00000439487 CLIC2O15247 247 aa21.19■□□□□ 0.98
SEMA3B-206ENST00000439487 PPP2R3AQ06190 1150 aa21.19■□□□□ 0.98
SEMA3B-206ENST00000439487 KNOP1Q1ED39 458 aaKnown RBP21.19■□□□□ 0.98
SEMA3B-206ENST00000439487 DDX53Q86TM3 631 aaKnown RBP21.19■□□□□ 0.98
SEMA3B-206ENST00000439487 MICAL1Q8TDZ2 1067 aa21.19■□□□□ 0.98
SEMA3B-206ENST00000439487 C18orf25Q96B23 403 aaPredicted RBP21.19■□□□□ 0.98
SEMA3B-206ENST00000439487 NSUN3Q9H649 340 aaKnown RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms