RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 SCNN1BP51168 640 aa4.19□□□□□ -1.74
HMGB1P18-201ENST00000438801 APBA1Q02410 837 aa4.19□□□□□ -1.74
HMGB1P18-201ENST00000438801 PPARAQ07869 468 aa4.19□□□□□ -1.74
HMGB1P18-201ENST00000438801 UBE3CQ15386 1083 aa4.19□□□□□ -1.74
HMGB1P18-201ENST00000438801 TERF2Q15554 542 aa4.19□□□□□ -1.74
HMGB1P18-201ENST00000438801 TKFCQ3LXA3 575 aa4.19□□□□□ -1.74
HMGB1P18-201ENST00000438801 FRMD7Q6ZUT3 714 aa4.19□□□□□ -1.74
HMGB1P18-201ENST00000438801 C16orf86Q6ZW13 317 aa4.19□□□□□ -1.74
HMGB1P18-201ENST00000438801 NIM1KQ8IY84 436 aa4.19□□□□□ -1.74
HMGB1P18-201ENST00000438801 RSAD2Q8WXG1 361 aa4.19□□□□□ -1.74
HMGB1P18-201ENST00000438801 VOPP1Q96AW1 172 aa4.19□□□□□ -1.74
HMGB1P18-201ENST00000438801 WNT8AQ9H1J5 351 aa4.19□□□□□ -1.74
HMGB1P18-201ENST00000438801 SERHL2Q9H4I8 314 aa4.19□□□□□ -1.74
HMGB1P18-201ENST00000438801 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.19□□□□□ -1.74
HMGB1P18-201ENST00000438801 AKIP1Q9NQ31 210 aa4.19□□□□□ -1.74
HMGB1P18-201ENST00000438801 ANKFY1Q9P2R3 1169 aa4.19□□□□□ -1.74
HMGB1P18-201ENST00000438801 EVLQ9UI08 416 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P18-201ENST00000438801 PRSS50Q9UI38 385 aa4.19□□□□□ -1.74
HMGB1P18-201ENST00000438801 TMPRSS11EQ9UL52 423 aa4.19□□□□□ -1.74
HMGB1P18-201ENST00000438801 CLCA2Q9UQC9 943 aa4.19□□□□□ -1.74
HMGB1P18-201ENST00000438801 CHST2Q9Y4C5 530 aa4.19□□□□□ -1.74
HMGB1P18-201ENST00000438801 AHDC1Q5TGY3 1603 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P18-201ENST00000438801 MEGF6O75095 1541 aa4.19□□□□□ -1.74
HMGB1P18-201ENST00000438801 ATRXP46100 2492 aa4.19□□□□□ -1.74
HMGB1P18-201ENST00000438801 WIZO95785 1651 aa4.19□□□□□ -1.74
HMGB1P18-201ENST00000438801 CACNA1BQ00975 2339 aa4.18□□□□□ -1.74
HMGB1P18-201ENST00000438801 RICTORQ6R327 1708 aa4.18□□□□□ -1.74
HMGB1P18-201ENST00000438801 GAGE12BA1L429 117 aa4.18□□□□□ -1.74
HMGB1P18-201ENST00000438801 GAGE12HA6NDE8 117 aa4.18□□□□□ -1.74
HMGB1P18-201ENST00000438801 ZAR1LA6NP61 321 aa4.18□□□□□ -1.74
HMGB1P18-201ENST00000438801 DIRC3C9JPN6 131 aa4.18□□□□□ -1.74
HMGB1P18-201ENST00000438801 LTA4HP09960 611 aaKnown RBP4.18□□□□□ -1.74
HMGB1P18-201ENST00000438801 FBLP22087 321 aaKnown RBP4.18□□□□□ -1.74
HMGB1P18-201ENST00000438801 LSSP48449 732 aa4.18□□□□□ -1.74
HMGB1P18-201ENST00000438801 CTCFP49711 727 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P18-201ENST00000438801 USP14P54578 494 aa4.18□□□□□ -1.74
HMGB1P18-201ENST00000438801 MANFP55145 182 aaKnown RBP4.18□□□□□ -1.74
HMGB1P18-201ENST00000438801 RNASE9P60153 205 aaKnown RBP4.18□□□□□ -1.74
HMGB1P18-201ENST00000438801 NHLH2Q02577 135 aa4.18□□□□□ -1.74
HMGB1P18-201ENST00000438801 CSRP2Q16527 193 aa4.18□□□□□ -1.74
HMGB1P18-201ENST00000438801 CCDC142Q17RM4 750 aa4.18□□□□□ -1.74
HMGB1P18-201ENST00000438801 OLFML1Q6UWY5 402 aa4.18□□□□□ -1.74
HMGB1P18-201ENST00000438801 Q6YL49 198 aa4.18□□□□□ -1.74
HMGB1P18-201ENST00000438801 PRIMA1Q86XR5 153 aa4.18□□□□□ -1.74
HMGB1P18-201ENST00000438801 SYT12Q8IV01 421 aa4.18□□□□□ -1.74
HMGB1P18-201ENST00000438801 LYSMD2Q8IV50 215 aa4.18□□□□□ -1.74
HMGB1P18-201ENST00000438801 ARHGEF19Q8IW93 802 aa4.18□□□□□ -1.74
HMGB1P18-201ENST00000438801 AHI1Q8N157 1196 aa4.18□□□□□ -1.74
HMGB1P18-201ENST00000438801 PPM1KQ8N3J5 372 aa4.18□□□□□ -1.74
HMGB1P18-201ENST00000438801 APPBP2Q92624 585 aa4.18□□□□□ -1.74
HMGB1P18-201ENST00000438801 CDC5LQ99459 802 aaKnown RBP4.18□□□□□ -1.74
HMGB1P18-201ENST00000438801 ANO3Q9BYT9 981 aa4.18□□□□□ -1.74
HMGB1P18-201ENST00000438801 WDR11Q9BZH6 1224 aa4.18□□□□□ -1.74
HMGB1P18-201ENST00000438801 PIF1Q9H611 641 aa4.18□□□□□ -1.74
HMGB1P18-201ENST00000438801 TNFRSF18Q9Y5U5 241 aa4.18□□□□□ -1.74
HMGB1P18-201ENST00000438801 ADAMTS7Q9UKP4 1686 aa4.18□□□□□ -1.74
HMGB1P18-201ENST00000438801 ZMYM3Q14202 1370 aa4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 KDM1AO60341 852 aa4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 PRAMEF4O60810 478 aa4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 RAB11FIP3O75154 756 aa4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 NDUFA10O95299 355 aa4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 FKBP9O95302 570 aa4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 CLEC2LP0C7M8 214 aa4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 ZSCAN20P17040 1043 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 BMPR1AP36894 532 aa4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 ADCYAP1R1P41586 468 aa4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 LBX1P52954 281 aa4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 IL2P60568 153 aa4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 TRIM25Q14258 630 aaKnown RBP4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 EZH2Q15910 746 aaKnown RBP4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 SEPT7Q16181 437 aaKnown RBP4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 BEAN1Q3B7T3 259 aa4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 C19orf54Q5BKX5 351 aa4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 CCDC62Q6P9F0 684 aa4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 DRICH1Q6PGQ1 229 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 FKBP9P1Q75LS8 142 aa4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 C11orf74Q86VG3 221 aa4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 PLXDC1Q8IUK5 500 aa4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 SLC41A1Q8IVJ1 513 aa4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 DHX37Q8IY37 1157 aaKnown RBP4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 LCORLQ8N3X6 602 aa4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 SUPT20HQ8NEM7 779 aa4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 OR10H5Q8NGA6 315 aa4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 OR2W6PQ8NHA6 318 aa4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 OR14C36Q8NHC7 312 aa4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 ZNF764Q96H86 408 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 TARS2Q9BW92 718 aaKnown RBP4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 TEX101Q9BY14 249 aa4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 SYNPO2LQ9H987 977 aa4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 FANCLQ9NW38 375 aa4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 PTGFRNQ9P2B2 879 aa4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 KCNG1Q9UIX4 513 aa4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 SZT2Q5T011 3432 aa4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 ARHGAP23Q9P227 1491 aa4.17□□□□□ -1.74
HMGB1P18-201ENST00000438801 SPHKAPQ2M3C7 1700 aa4.16□□□□□ -1.74
HMGB1P18-201ENST00000438801 DIP2AQ14689 1571 aa4.16□□□□□ -1.74
HMGB1P18-201ENST00000438801 NPATQ14207 1427 aa4.16□□□□□ -1.74
HMGB1P18-201ENST00000438801 TBKBP1A7MCY6 615 aa4.16□□□□□ -1.74
HMGB1P18-201ENST00000438801 KIAA0355O15063 1070 aa4.16□□□□□ -1.74
HMGB1P18-201ENST00000438801 ITGA10O75578 1167 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms