RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 CLIC2O15247 247 aa7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 CALUO43852 315 aaPredicted RBP7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 CSDE1O75534 798 aaKnown RBP7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 RECKO95980 971 aa7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 PIGRP01833 764 aa7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 TFRCP02786 760 aaKnown RBP7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 ADSSP30520 456 aa7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 ABCD1P33897 745 aa7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 PHKA2P46019 1235 aa7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 CDK7P50613 346 aa7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 SNRPFP62306 86 aaKnown RBP7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 TPM4P67936 248 aa7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 FKBP3Q00688 224 aaKnown RBP7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 STRN3Q13033 797 aa7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 ADAM9Q13443 819 aa7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 KCNJ12Q14500 433 aa7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 TLR1Q15399 786 aa7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 PTGISQ16647 500 aa7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 TPD52L1Q16890 204 aaPredicted RBP7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 KIZQ2M2Z5 673 aa7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 TRIM71Q2Q1W2 868 aaKnown RBP7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 TAF2Q6P1X5 1199 aa7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 SARM1Q6SZW1 724 aa7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 HS2ST1Q7LGA3 356 aa7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 FILIP1Q7Z7B0 1213 aa7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 ZNF410Q86VK4 478 aa7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 ZBTB8OSQ8IWT0 167 aa7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 C12orf56Q8IXR9 622 aa7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 NME8Q8N427 588 aa7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 TMEM174Q8WUU8 243 aa7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 DHX38Q92620 1227 aaKnown RBP7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 CEP63Q96MT8 703 aa7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 TARS2Q9BW92 718 aaKnown RBP7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 PRKD2Q9BZL6 878 aa7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 TRPV6Q9H1D0 765 aa7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 PRDM10Q9NQV6 1147 aa7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 STARD7Q9NQZ5 370 aa7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 TRMT13Q9NUP7 481 aaKnown RBP7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 LIMA1Q9UHB6 759 aaKnown RBP7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 EXOC7Q9UPT5 735 aa7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 STYXL1Q9Y6J8 313 aa7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 PHLPP2Q6ZVD8 1323 aa7.69□□□□□ -1.18
LSM3P3-201ENST00000436601 A0A0U1RQG5 324 aaPredicted RBP7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 INO80B-WBP1J3KQ70 363 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 ARVCFO00192 962 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 ACKR2O00590 384 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 ABLIM1O14639 778 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 CETN3O15182 167 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 B4GALT5O43286 388 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 FZD6O60353 706 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 B4GALT4O60513 344 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 AKAP3O75969 853 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 FGFR1OPO95684 399 aaKnown RBP7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 IL2RAP01589 272 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 CHRNA1P02708 482 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 PRKCBP05771 671 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 ADH1AP07327 375 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 COL6A1P12109 1028 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 DARSP14868 501 aaKnown RBP7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 NR2F2P24468 414 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 RPL13P26373 211 aaKnown RBP7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 EEF1GP26641 437 aaKnown RBP7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 GJA8P48165 433 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 CASP4P49662 377 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 CRYBB1P53674 252 aaPredicted RBP7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 CDC42EP1Q00587 391 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 FANCCQ00597 558 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 TAGLNQ01995 201 aaKnown RBP7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 MYBPC2Q14324 1141 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 MAPK6Q16659 721 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 FAM187BQ17R55 369 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 TCP11X2Q5H9J9 407 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 ZPBP2Q6X784 338 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 LIAT1Q6ZQX7 453 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 SRGAP1Q7Z6B7 1085 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 RPAINQ86UA6 219 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 ZSWIM2Q8NEG5 633 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 GOLGA5Q8TBA6 731 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 TMEM40Q8WWA1 233 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 BORCS6Q96GS4 357 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 ZBTB45Q96K62 511 aaPredicted RBP7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 NAP1L5Q96NT1 182 aaPredicted RBP7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 CBWD1Q9BRT8 395 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 CELF4Q9BZC1 486 aaKnown RBP7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 INO80BQ9C086 356 aaPredicted RBP7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 HAPLN2Q9GZV7 340 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 PCIF1Q9H4Z3 704 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 PTPRHQ9HD43 1115 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 RAB6BQ9NRW1 208 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 CGNQ9P2M7 1197 aaKnown RBP7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 HRH3Q9Y5N1 445 aa7.68□□□□□ -1.18
LSM3P3-201ENST00000436601 A0A0B4J269 797 aa7.67□□□□□ -1.18
LSM3P3-201ENST00000436601 SERTM1A2A2V5 107 aa7.67□□□□□ -1.18
LSM3P3-201ENST00000436601 HNRNPDLO14979 420 aaKnown RBP7.67□□□□□ -1.18
LSM3P3-201ENST00000436601 TSPAN1O60635 241 aa7.67□□□□□ -1.18
LSM3P3-201ENST00000436601 TOM1L1O75674 476 aa7.67□□□□□ -1.18
LSM3P3-201ENST00000436601 ADCY5O95622 1261 aa7.67□□□□□ -1.18
LSM3P3-201ENST00000436601 CDK11BP21127 795 aaKnown RBP7.67□□□□□ -1.18
LSM3P3-201ENST00000436601 FGFR4P22455 802 aa7.67□□□□□ -1.18
LSM3P3-201ENST00000436601 PROZP22891 400 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms