RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 FAM81BQ96LP2 452 aa19.95■□□□□ 0.78
CLK1-205ENST00000434813 TRIM31Q9BZY9 425 aa19.95■□□□□ 0.78
CLK1-205ENST00000434813 CHORDC1Q9UHD1 332 aaPredicted RBP19.95■□□□□ 0.78
CLK1-205ENST00000434813 LCTP09848 1927 aa19.95■□□□□ 0.78
CLK1-205ENST00000434813 C19orf81C9J6K1 198 aa19.95■□□□□ 0.78
CLK1-205ENST00000434813 KIAA0391O15091 583 aaKnown RBP19.95■□□□□ 0.78
CLK1-205ENST00000434813 PTGIRP43119 386 aa19.95■□□□□ 0.78
CLK1-205ENST00000434813 KCTD19Q17RG1 926 aaPredicted RBP19.95■□□□□ 0.78
CLK1-205ENST00000434813 GNPTABQ3T906 1256 aa19.95■□□□□ 0.78
CLK1-205ENST00000434813 AGBL2Q5U5Z8 902 aa19.95■□□□□ 0.78
CLK1-205ENST00000434813 C9orf131Q5VYM1 1079 aa19.95■□□□□ 0.78
CLK1-205ENST00000434813 C15orf39Q6ZRI6 1047 aa19.95■□□□□ 0.78
CLK1-205ENST00000434813 DHX38Q92620 1227 aaKnown RBP19.95■□□□□ 0.78
CLK1-205ENST00000434813 KCNN1Q92952 543 aa19.95■□□□□ 0.78
CLK1-205ENST00000434813 IFT74Q96LB3 600 aa19.95■□□□□ 0.78
CLK1-205ENST00000434813 POLR3FQ9H1D9 316 aaPredicted RBP19.95■□□□□ 0.78
CLK1-205ENST00000434813 A1CFQ9NQ94 594 aaKnown RBP19.95■□□□□ 0.78
CLK1-205ENST00000434813 TELO2Q9Y4R8 837 aa19.95■□□□□ 0.78
CLK1-205ENST00000434813 SIP14410 1827 aa19.94■□□□□ 0.78
CLK1-205ENST00000434813 SRRM3A6NNA2 597 aaPredicted RBP19.94■□□□□ 0.78
CLK1-205ENST00000434813 SPATA31C2B4DYI2 1134 aa19.94■□□□□ 0.78
CLK1-205ENST00000434813 EBAG9O00559 213 aa19.94■□□□□ 0.78
CLK1-205ENST00000434813 ERLIN2O94905 339 aa19.94■□□□□ 0.78
CLK1-205ENST00000434813 DLATP10515 647 aaKnown RBP19.94■□□□□ 0.78
CLK1-205ENST00000434813 GBP1P32455 592 aa19.94■□□□□ 0.78
CLK1-205ENST00000434813 CORO7P57737 925 aa19.94■□□□□ 0.78
CLK1-205ENST00000434813 GUCY1A3Q02108 690 aa19.94■□□□□ 0.78
CLK1-205ENST00000434813 PRKG1Q13976 671 aa19.94■□□□□ 0.78
CLK1-205ENST00000434813 CYP1B1Q16678 543 aa19.94■□□□□ 0.78
CLK1-205ENST00000434813 ACAD10Q6JQN1 1059 aa19.94■□□□□ 0.78
CLK1-205ENST00000434813 MIS18BP1Q6P0N0 1132 aa19.94■□□□□ 0.78
CLK1-205ENST00000434813 SULF1Q8IWU6 871 aa19.94■□□□□ 0.78
CLK1-205ENST00000434813 C18orf8Q96DM3 657 aa19.94■□□□□ 0.78
CLK1-205ENST00000434813 BICD1Q96G01 975 aa19.94■□□□□ 0.78
CLK1-205ENST00000434813 FAM107BQ9H098 131 aa19.94■□□□□ 0.78
CLK1-205ENST00000434813 PCDHA3Q9Y5H8 950 aa19.94■□□□□ 0.78
CLK1-205ENST00000434813 TRIM66O15016 1216 aa19.93■□□□□ 0.78
CLK1-205ENST00000434813 SPOPO43791 374 aa19.93■□□□□ 0.78
CLK1-205ENST00000434813 MDH1P40925 334 aaKnown RBP19.93■□□□□ 0.78
CLK1-205ENST00000434813 CLDN10P78369 228 aa19.93■□□□□ 0.78
CLK1-205ENST00000434813 CLEC16AQ2KHT3 1053 aa19.93■□□□□ 0.78
CLK1-205ENST00000434813 XKR3Q5GH77 459 aa19.93■□□□□ 0.78
CLK1-205ENST00000434813 ZDHHC14Q8IZN3 488 aa19.93■□□□□ 0.78
CLK1-205ENST00000434813 FAM213AQ9BRX8 229 aa19.93■□□□□ 0.78
CLK1-205ENST00000434813 KIAA1586Q9HCI6 787 aa19.93■□□□□ 0.78
CLK1-205ENST00000434813 KCNG1Q9UIX4 513 aa19.93■□□□□ 0.78
CLK1-205ENST00000434813 EXTL3O43909 919 aa19.93■□□□□ 0.78
CLK1-205ENST00000434813 SUPT20HL2P0C7V6 817 aa19.93■□□□□ 0.78
CLK1-205ENST00000434813 PYGMP11217 842 aa19.93■□□□□ 0.78
CLK1-205ENST00000434813 EIF3BP55884 814 aaKnown RBP19.93■□□□□ 0.78
CLK1-205ENST00000434813 DPY19L2Q6NUT2 758 aa19.93■□□□□ 0.78
CLK1-205ENST00000434813 ZDHHC24Q6UX98 284 aa19.93■□□□□ 0.78
CLK1-205ENST00000434813 CATSPERGQ6ZRH7 1159 aa19.93■□□□□ 0.78
CLK1-205ENST00000434813 TATDN2Q93075 761 aa19.93■□□□□ 0.78
CLK1-205ENST00000434813 RUNDC3BQ96NL0 473 aa19.93■□□□□ 0.78
CLK1-205ENST00000434813 EPN3Q9H201 632 aa19.93■□□□□ 0.78
CLK1-205ENST00000434813 C1orf112Q9NSG2 853 aa19.93■□□□□ 0.78
CLK1-205ENST00000434813 PODXLO00592 558 aa19.92■□□□□ 0.78
CLK1-205ENST00000434813 SCP2P22307 547 aa19.92■□□□□ 0.78
CLK1-205ENST00000434813 SP4Q02446 784 aa19.92■□□□□ 0.78
CLK1-205ENST00000434813 EMC2Q15006 297 aa19.92■□□□□ 0.78
CLK1-205ENST00000434813 PTGISQ16647 500 aa19.92■□□□□ 0.78
CLK1-205ENST00000434813 NOL9Q5SY16 702 aaKnown RBP19.92■□□□□ 0.78
CLK1-205ENST00000434813 TTC27Q6P3X3 843 aa19.92■□□□□ 0.78
CLK1-205ENST00000434813 SLC13A5Q86YT5 568 aaPredicted RBP19.92■□□□□ 0.78
CLK1-205ENST00000434813 MAGOHBQ96A72 148 aaKnown RBP19.92■□□□□ 0.78
CLK1-205ENST00000434813 RASSF4Q9H2L5 321 aa19.92■□□□□ 0.78
CLK1-205ENST00000434813 CENPHQ9H3R5 247 aa19.92■□□□□ 0.78
CLK1-205ENST00000434813 GRHL1Q9NZI5 618 aa19.92■□□□□ 0.78
CLK1-205ENST00000434813 MTUS1Q9ULD2 1270 aa19.92■□□□□ 0.78
CLK1-205ENST00000434813 ATP8A1Q9Y2Q0 1164 aa19.92■□□□□ 0.78
CLK1-205ENST00000434813 SSC5DA1L4H1 1573 aa19.92■□□□□ 0.78
CLK1-205ENST00000434813 TULP1O00294 542 aaPredicted RBP19.92■□□□□ 0.78
CLK1-205ENST00000434813 NDUFAB1O14561 156 aa19.92■□□□□ 0.78
CLK1-205ENST00000434813 KRT5P13647 590 aa19.92■□□□□ 0.78
CLK1-205ENST00000434813 RWDD2BP57060 319 aa19.92■□□□□ 0.78
CLK1-205ENST00000434813 PSMD6Q15008 389 aa19.92■□□□□ 0.78
CLK1-205ENST00000434813 C10orf67Q8IYJ2 551 aa19.92■□□□□ 0.78
CLK1-205ENST00000434813 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.92■□□□□ 0.78
CLK1-205ENST00000434813 BTBD6Q96KE9 485 aa19.92■□□□□ 0.78
CLK1-205ENST00000434813 RABEP2Q9H5N1 569 aa19.92■□□□□ 0.78
CLK1-205ENST00000434813 CNOT8Q9UFF9 292 aaKnown RBP19.92■□□□□ 0.78
CLK1-205ENST00000434813 SLC12A6Q9UHW9 1150 aa19.92■□□□□ 0.78
CLK1-205ENST00000434813 STYXL1Q9Y6J8 313 aa19.92■□□□□ 0.78
CLK1-205ENST00000434813 MYPNQ86TC9 1320 aa19.91■□□□□ 0.78
CLK1-205ENST00000434813 NUDT17P0C025 328 aa19.91■□□□□ 0.78
CLK1-205ENST00000434813 HPDP32754 393 aaPredicted RBP19.91■□□□□ 0.78
CLK1-205ENST00000434813 LIG4P49917 911 aa19.91■□□□□ 0.78
CLK1-205ENST00000434813 SIX1Q15475 284 aaPredicted RBP19.91■□□□□ 0.78
CLK1-205ENST00000434813 MTERF2Q49AM1 385 aa19.91■□□□□ 0.78
CLK1-205ENST00000434813 CCDC137Q6PK04 289 aaKnown RBP19.91■□□□□ 0.78
CLK1-205ENST00000434813 ZNF677Q86XU0 584 aa19.91■□□□□ 0.78
CLK1-205ENST00000434813 CPNE8Q86YQ8 564 aa19.91■□□□□ 0.78
CLK1-205ENST00000434813 C12orf50Q8NA57 414 aaPredicted RBP19.91■□□□□ 0.78
CLK1-205ENST00000434813 PI4K2AQ9BTU6 479 aa19.91■□□□□ 0.78
CLK1-205ENST00000434813 AVENQ9NQS1 362 aaPredicted RBP19.91■□□□□ 0.78
CLK1-205ENST00000434813 PARP2Q9UGN5 583 aa19.91■□□□□ 0.78
CLK1-205ENST00000434813 WDR90Q96KV7 1748 aa19.9■□□□□ 0.78
CLK1-205ENST00000434813 UNGP13051 313 aaPredicted RBP19.9■□□□□ 0.78
CLK1-205ENST00000434813 POLGP54098 1239 aaPredicted RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms