RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 CLSTN1O94985 981 aa8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 AFPP02771 609 aaKnown RBP8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 TMEM191BP0C7N4 346 aa8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 ACRP10323 421 aa8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 ACTN1P12814 892 aa8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 TNNI1P19237 187 aa8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 MLH1P40692 756 aa8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 MRE11P49959 708 aa8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 MARSP56192 900 aaKnown RBP8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 WNT7BP56706 349 aa8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 UBASH3AP57075 661 aa8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 DLG4P78352 724 aa8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 TFAMQ00059 246 aaKnown RBP8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 MYL7Q01449 175 aa8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 BIRC3Q13489 604 aa8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 IKBKEQ14164 716 aa8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 TMEM132DQ14C87 1099 aa8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 SURF1Q15526 300 aa8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 TCTN1Q2MV58 587 aa8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 VWA3BQ502W6 1294 aa8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 LMBRD2Q68DH5 695 aaPredicted RBP8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 GLB1LQ6UWU2 654 aa8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 PLEKHO2Q8TD55 490 aa8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 TMC2Q8TDI7 906 aa8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 SLC35C1Q96A29 364 aa8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 PGBD4Q96DM1 585 aa8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 BORCS6Q96GS4 357 aa8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 MFSD14AQ96MC6 490 aa8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 RPS6KC1Q96S38 1066 aa8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 CGRRF1Q99675 332 aa8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 TRAIPQ9BWF2 469 aa8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 TRIM5Q9C035 493 aa8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 XPO4Q9C0E2 1151 aaKnown RBP8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 IL23AQ9NPF7 189 aa8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 KLK14Q9P0G3 267 aa8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 LRFN2Q9ULH4 789 aa8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 INPP5FQ9Y2H2 1132 aa8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 MYH11P35749 1972 aa8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 KAT6AQ92794 2004 aa8.58□□□□□ -1.04
HMGA1P4-201ENST00000428643 ABHD14A-ACY1A0A1B0GW23 586 aa8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 MEIS3P2A8K0S8 358 aa8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 ZBBXA8MT70 800 aa8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 LACTBL1A8MY62 500 aa8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 C9IYK1 514 aa8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 N4BP1O75113 896 aaKnown RBP8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 TNNC2P02585 160 aa8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 AMHP03971 560 aa8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 NFICP08651 508 aa8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 ATF7P17544 494 aaPredicted RBP8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 KCNJ6P48051 423 aa8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 GCLMP48507 274 aa8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 MXI1P50539 228 aa8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 UBXN1Q04323 297 aa8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 SLC10A6Q3KNW5 377 aa8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 GLRA4Q5JXX5 417 aa8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 JADE1Q6IE81 842 aa8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 PSRC1Q6PGN9 363 aaPredicted RBP8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 SARM1Q6SZW1 724 aa8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 FAM43BQ6ZT52 329 aaPredicted RBP8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 NPAS4Q8IUM7 802 aa8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 WDR49Q8IV35 697 aa8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 ABI1Q8IZP0 508 aa8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 PARD3BQ8TEW8 1205 aa8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 ANP32BQ92688 251 aaKnown RBP8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 KIF12Q96FN5 646 aa8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 FAM84AQ96KN4 292 aa8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 PCMTD1Q96MG8 357 aaPredicted RBP8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 ZFP42Q96MM3 310 aa8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 GAD1Q99259 594 aa8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 POP1Q99575 1024 aaKnown RBP8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 MTMR12Q9C0I1 747 aa8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 NDST4Q9H3R1 872 aa8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 ASB7Q9H672 318 aa8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 RSAD1Q9HA92 442 aa8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 PLEKHA5Q9HAU0 1116 aa8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 RNF216Q9NWF9 866 aaPredicted RBP8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 TMEM161AQ9NX61 479 aa8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 NR2E3Q9Y5X4 410 aa8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 BRCA2P51587 3418 aa8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 TRIP12Q14669 1992 aaPredicted RBP8.57□□□□□ -1.04
HMGA1P4-201ENST00000428643 PTPRJQ12913 1337 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 EVPLQ92817 2033 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 A0A1B0GTH6 734 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 TTC26A0AVF1 554 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 ARL5CA6NH57 179 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 ENPP3O14638 875 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 MEFVO15553 781 aaPredicted RBP8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 AP5Z1O43299 807 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 EFCAB14O75071 495 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 ZNF623O75123 536 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 PHACTR2O75167 634 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 BAIAP3O94812 1187 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 EOMESO95936 686 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 FGFR1P11362 822 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 KCNE1P15382 129 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 GTF2H1P32780 548 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 PIK3CAP42336 1068 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 FMO5P49326 533 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 ZNF75DP51815 510 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 AP3M2P53677 418 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms