RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 KCNH2Q12809 1159 aa15.19■□□□□ 0.02
PTPN13-203ENST00000427191 OR6P1Q8NGX9 317 aa15.19■□□□□ 0.02
PTPN13-203ENST00000427191 RAD54LQ92698 747 aa15.19■□□□□ 0.02
PTPN13-203ENST00000427191 HDAC6Q9UBN7 1215 aa15.19■□□□□ 0.02
PTPN13-203ENST00000427191 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.19■□□□□ 0.02
PTPN13-203ENST00000427191 DPYSL4O14531 572 aa15.19■□□□□ 0.02
PTPN13-203ENST00000427191 ZNF568Q3ZCX4 644 aa15.19■□□□□ 0.02
PTPN13-203ENST00000427191 SLC44A4Q53GD3 710 aa15.19■□□□□ 0.02
PTPN13-203ENST00000427191 THEMIS2Q5TEJ8 643 aa15.19■□□□□ 0.02
PTPN13-203ENST00000427191 IZUMO3Q5VZ72 239 aa15.19■□□□□ 0.02
PTPN13-203ENST00000427191 RTN2O75298 545 aa15.19■□□□□ 0.02
PTPN13-203ENST00000427191 PKN2Q16513 984 aaKnown RBP15.19■□□□□ 0.02
PTPN13-203ENST00000427191 BTN2A2Q8WVV5 523 aa15.19■□□□□ 0.02
PTPN13-203ENST00000427191 LGR6Q9HBX8 967 aa15.19■□□□□ 0.02
PTPN13-203ENST00000427191 RGL1Q9NZL6 768 aa15.19■□□□□ 0.02
PTPN13-203ENST00000427191 MBD2Q9UBB5 411 aa15.19■□□□□ 0.02
PTPN13-203ENST00000427191 E4F1Q66K89 784 aaPredicted RBP15.19■□□□□ 0.02
PTPN13-203ENST00000427191 PDCD6IPQ8WUM4 868 aaKnown RBP15.19■□□□□ 0.02
PTPN13-203ENST00000427191 TRPC5OSA6NMA1 111 aa15.19■□□□□ 0.02
PTPN13-203ENST00000427191 ZMYND8Q9ULU4 1186 aaPredicted RBP15.19■□□□□ 0.02
PTPN13-203ENST00000427191 ANKARQ7Z5J8 1434 aa15.19■□□□□ 0.02
PTPN13-203ENST00000427191 ERVV-1B6SEH8 477 aa15.19■□□□□ 0.02
PTPN13-203ENST00000427191 ITIH2P19823 946 aa15.19■□□□□ 0.02
PTPN13-203ENST00000427191 ACTR2P61160 394 aa15.19■□□□□ 0.02
PTPN13-203ENST00000427191 EEF2KMTQ96G04 330 aa15.19■□□□□ 0.02
PTPN13-203ENST00000427191 ATP10AO60312 1499 aa15.19■□□□□ 0.02
PTPN13-203ENST00000427191 ADAMTS12P58397 1594 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 C3orf70A6NLC5 250 aaPredicted RBP15.18■□□□□ 0.02
PTPN13-203ENST00000427191 ZBTB5O15062 677 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 CYP21A2P08686 494 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 PHKG2P15735 406 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 VEPH1Q14D04 833 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 DIS3LQ8TF46 1054 aaKnown RBP15.18■□□□□ 0.02
PTPN13-203ENST00000427191 TRIM63Q969Q1 353 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 SRPK1Q96SB4 655 aaKnown RBP15.18■□□□□ 0.02
PTPN13-203ENST00000427191 SLC13A1Q9BZW2 595 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 KCND2Q9NZV8 630 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 TJP2Q9UDY2 1190 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 TCP11X1B4DZS4 312 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 MYL2P10916 166 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 SYTL3Q4VX76 610 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 BHMT2Q9H2M3 363 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 ABCB11O95342 1321 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 NPEPPSP55786 919 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 PEX3P56589 373 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 RBM46Q8TBY0 533 aaKnown RBP15.18■□□□□ 0.02
PTPN13-203ENST00000427191 OTULINQ96BN8 352 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 FANCEQ9HB96 536 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 MDH1P40925 334 aaKnown RBP15.18■□□□□ 0.02
PTPN13-203ENST00000427191 FAM83BQ5T0W9 1011 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 FAM162AQ96A26 154 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 SLC24A3Q9HC58 644 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 NFKBIL1Q9UBC1 381 aaPredicted RBP15.18■□□□□ 0.02
PTPN13-203ENST00000427191 SORBS3O60504 671 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 PPP1R37O75864 691 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 EFNA5P52803 228 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 PDAP1Q13442 181 aaKnown RBP15.18■□□□□ 0.02
PTPN13-203ENST00000427191 TRIM16LQ309B1 348 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 ARMCX4Q5H9R4 360 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 KCTD17Q8N5Z5 321 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 OSBPL10Q9BXB5 764 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 SMARCAD1Q9H4L7 1026 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 SARS2Q9NP81 518 aaKnown RBP15.18■□□□□ 0.02
PTPN13-203ENST00000427191 BICRAQ9NZM4 1560 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 EVPLLA8MZ36 301 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 GNL1P36915 607 aaPredicted RBP15.18■□□□□ 0.02
PTPN13-203ENST00000427191 ZNF544Q6NX49 715 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 P3H2Q8IVL5 708 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 DDHD1Q8NEL9 900 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 KLHL31Q9H511 634 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 M0QYV0 167 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 ARSEP51690 589 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 ARPP19P56211 112 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 PIGHQ14442 188 aaPredicted RBP15.18■□□□□ 0.02
PTPN13-203ENST00000427191 GUF1Q8N442 669 aaKnown RBP15.18■□□□□ 0.02
PTPN13-203ENST00000427191 DNAJC9Q8WXX5 260 aa15.18■□□□□ 0.02
PTPN13-203ENST00000427191 DSG1Q02413 1049 aa15.17■□□□□ 0.02
PTPN13-203ENST00000427191 USE1Q9NZ43 259 aa15.17■□□□□ 0.02
PTPN13-203ENST00000427191 DENND3A2RUS2 1198 aa15.17■□□□□ 0.02
PTPN13-203ENST00000427191 PHKA1P46020 1223 aa15.17■□□□□ 0.02
PTPN13-203ENST00000427191 TAS2R42Q7RTR8 314 aa15.17■□□□□ 0.02
PTPN13-203ENST00000427191 SPICE1Q8N0Z3 855 aa15.17■□□□□ 0.02
PTPN13-203ENST00000427191 HOXC10Q9NYD6 342 aa15.17■□□□□ 0.02
PTPN13-203ENST00000427191 CHMP2BQ9UQN3 213 aa15.17■□□□□ 0.02
PTPN13-203ENST00000427191 EIF3HO15372 352 aaKnown RBP eCLIP15.17■□□□□ 0.02
PTPN13-203ENST00000427191 PHF2O75151 1096 aa15.17■□□□□ 0.02
PTPN13-203ENST00000427191 DUOXA2Q1HG44 320 aa15.17■□□□□ 0.02
PTPN13-203ENST00000427191 CCDC103Q8IW40 242 aa15.17■□□□□ 0.02
PTPN13-203ENST00000427191 AFG1LQ8WV93 481 aa15.17■□□□□ 0.02
PTPN13-203ENST00000427191 ARHGEF26Q96DR7 871 aa15.17■□□□□ 0.02
PTPN13-203ENST00000427191 CCT7Q99832 543 aa15.17■□□□□ 0.02
PTPN13-203ENST00000427191 CLCA2Q9UQC9 943 aa15.17■□□□□ 0.02
PTPN13-203ENST00000427191 CDK12Q9NYV4 1490 aaPredicted RBP15.17■□□□□ 0.02
PTPN13-203ENST00000427191 SNRPFP62306 86 aaKnown RBP15.17■□□□□ 0.02
PTPN13-203ENST00000427191 ADGRL3Q9HAR2 1447 aa15.17■□□□□ 0.02
PTPN13-203ENST00000427191 USP13Q92995 863 aaPredicted RBP15.17■□□□□ 0.02
PTPN13-203ENST00000427191 CCDC126Q96EE4 140 aa15.17■□□□□ 0.02
PTPN13-203ENST00000427191 ENOPH1Q9UHY7 261 aa15.17■□□□□ 0.02
PTPN13-203ENST00000427191 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.17■□□□□ 0.02
PTPN13-203ENST00000427191 TRAPPC3O43617 180 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms