RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 PRPF40AO75400 957 aaKnown RBP20.15■□□□□ 0.82
HDAC6-205ENST00000423941 FGF18O76093 207 aa20.15■□□□□ 0.82
HDAC6-205ENST00000423941 ALDH2P05091 517 aa20.15■□□□□ 0.82
HDAC6-205ENST00000423941 THP07101 528 aa20.15■□□□□ 0.82
HDAC6-205ENST00000423941 GARTP22102 1010 aa20.15■□□□□ 0.82
HDAC6-205ENST00000423941 DNAJB1P25685 340 aa20.15■□□□□ 0.82
HDAC6-205ENST00000423941 PPM1AP35813 382 aa20.15■□□□□ 0.82
HDAC6-205ENST00000423941 SLC11A1P49279 550 aa20.15■□□□□ 0.82
HDAC6-205ENST00000423941 ALDH7A1P49419 539 aaKnown RBP20.15■□□□□ 0.82
HDAC6-205ENST00000423941 SPOUT1Q5T280 376 aaKnown RBP20.15■□□□□ 0.82
HDAC6-205ENST00000423941 CRELD2Q6UXH1 353 aaPredicted RBP20.15■□□□□ 0.82
HDAC6-205ENST00000423941 MRPL38Q96DV4 380 aaKnown RBP20.15■□□□□ 0.82
HDAC6-205ENST00000423941 EXOC1Q9NV70 894 aa20.15■□□□□ 0.82
HDAC6-205ENST00000423941 EYSQ5T1H1 3165 aa20.15■□□□□ 0.82
HDAC6-205ENST00000423941 ZC3H11AO75152 810 aaKnown RBP eCLIP20.14■□□□□ 0.81
HDAC6-205ENST00000423941 PBX3P40426 434 aa20.14■□□□□ 0.81
HDAC6-205ENST00000423941 TNFSF9P41273 254 aa20.14■□□□□ 0.81
HDAC6-205ENST00000423941 YARSP54577 528 aaKnown RBP20.14■□□□□ 0.81
HDAC6-205ENST00000423941 OSTNP61366 133 aa20.14■□□□□ 0.81
HDAC6-205ENST00000423941 SNRPFP62306 86 aaKnown RBP20.14■□□□□ 0.81
HDAC6-205ENST00000423941 ZBTB6Q15916 424 aa20.14■□□□□ 0.81
HDAC6-205ENST00000423941 ENOX2Q16206 610 aaKnown RBP20.14■□□□□ 0.81
HDAC6-205ENST00000423941 SEZ6Q53EL9 994 aa20.14■□□□□ 0.81
HDAC6-205ENST00000423941 ZBTB41Q5SVQ8 909 aa20.14■□□□□ 0.81
HDAC6-205ENST00000423941 TMEM174Q8WUU8 243 aa20.14■□□□□ 0.81
HDAC6-205ENST00000423941 ZMAT2Q96NC0 199 aaKnown RBP20.14■□□□□ 0.81
HDAC6-205ENST00000423941 GSDMAQ96QA5 445 aa20.14■□□□□ 0.81
HDAC6-205ENST00000423941 RPS6KC1Q96S38 1066 aa20.14■□□□□ 0.81
HDAC6-205ENST00000423941 MSTO1Q9BUK6 570 aa20.14■□□□□ 0.81
HDAC6-205ENST00000423941 ALG13Q9NP73 1137 aaKnown RBP20.14■□□□□ 0.81
HDAC6-205ENST00000423941 AGO2Q9UKV8 859 aaKnown RBP20.14■□□□□ 0.81
HDAC6-205ENST00000423941 PRRC2BQ5JSZ5 2229 aaKnown RBP20.14■□□□□ 0.81
HDAC6-205ENST00000423941 NRP1O14786 923 aa20.13■□□□□ 0.81
HDAC6-205ENST00000423941 TUSC3Q13454 348 aa20.13■□□□□ 0.81
HDAC6-205ENST00000423941 PNOCQ13519 176 aa20.13■□□□□ 0.81
HDAC6-205ENST00000423941 TMEM173Q86WV6 379 aaPredicted RBP20.13■□□□□ 0.81
HDAC6-205ENST00000423941 SYCP3Q8IZU3 236 aa20.13■□□□□ 0.81
HDAC6-205ENST00000423941 BCL7CQ8WUZ0 217 aaPredicted RBP20.13■□□□□ 0.81
HDAC6-205ENST00000423941 IGSF21Q96ID5 467 aa20.13■□□□□ 0.81
HDAC6-205ENST00000423941 TSPAN18Q96SJ8 248 aa20.13■□□□□ 0.81
HDAC6-205ENST00000423941 GBP3Q9H0R5 595 aa20.13■□□□□ 0.81
HDAC6-205ENST00000423941 LMBRD1Q9NUN5 540 aa20.13■□□□□ 0.81
HDAC6-205ENST00000423941 PCDHA5Q9Y5H7 936 aa20.13■□□□□ 0.81
HDAC6-205ENST00000423941 NT5C1B-RDH14C9J2C7 533 aa20.12■□□□□ 0.81
HDAC6-205ENST00000423941 KIAA0391O15091 583 aaKnown RBP20.12■□□□□ 0.81
HDAC6-205ENST00000423941 HARSP12081 509 aaKnown RBP20.12■□□□□ 0.81
HDAC6-205ENST00000423941 FOSL2P15408 326 aa20.12■□□□□ 0.81
HDAC6-205ENST00000423941 MATR3P43243 847 aaKnown RBP eCLIP20.12■□□□□ 0.81
HDAC6-205ENST00000423941 KNOP1Q1ED39 458 aaKnown RBP20.12■□□□□ 0.81
HDAC6-205ENST00000423941 C12orf56Q8IXR9 622 aa20.12■□□□□ 0.81
HDAC6-205ENST00000423941 RNF168Q8IYW5 571 aaPredicted RBP20.12■□□□□ 0.81
HDAC6-205ENST00000423941 POF1BQ8WVV4 589 aa20.12■□□□□ 0.81
HDAC6-205ENST00000423941 POMGNT1Q8WZA1 660 aa20.12■□□□□ 0.81
HDAC6-205ENST00000423941 FAM193BQ96PV7 902 aaPredicted RBP20.12■□□□□ 0.81
HDAC6-205ENST00000423941 CBWD1Q9BRT8 395 aa20.12■□□□□ 0.81
HDAC6-205ENST00000423941 KCTD10Q9H3F6 313 aa20.12■□□□□ 0.81
HDAC6-205ENST00000423941 MARCH5Q9NX47 278 aa20.12■□□□□ 0.81
HDAC6-205ENST00000423941 CGNQ9P2M7 1197 aaKnown RBP20.12■□□□□ 0.81
HDAC6-205ENST00000423941 FAN1Q9Y2M0 1017 aa20.12■□□□□ 0.81
HDAC6-205ENST00000423941 KINO60870 393 aaKnown RBP20.11■□□□□ 0.81
HDAC6-205ENST00000423941 LDHAP00338 332 aaKnown RBP20.11■□□□□ 0.81
HDAC6-205ENST00000423941 CXCL8P10145 99 aa20.11■□□□□ 0.81
HDAC6-205ENST00000423941 ACOT2P49753 483 aa20.11■□□□□ 0.81
HDAC6-205ENST00000423941 PTPROQ16827 1216 aa20.11■□□□□ 0.81
HDAC6-205ENST00000423941 COBLL1Q53SF7 1204 aa20.11■□□□□ 0.81
HDAC6-205ENST00000423941 DDX53Q86TM3 631 aaKnown RBP20.11■□□□□ 0.81
HDAC6-205ENST00000423941 CD302Q8IX05 232 aa20.11■□□□□ 0.81
HDAC6-205ENST00000423941 ZSWIM2Q8NEG5 633 aa20.11■□□□□ 0.81
HDAC6-205ENST00000423941 CCDC47Q96A33 483 aaKnown RBP20.11■□□□□ 0.81
HDAC6-205ENST00000423941 FBXL18Q96ME1 805 aa20.11■□□□□ 0.81
HDAC6-205ENST00000423941 VN1R3Q9BXE9 311 aa20.11■□□□□ 0.81
HDAC6-205ENST00000423941 HOOK1Q9UJC3 728 aaKnown RBP20.11■□□□□ 0.81
HDAC6-205ENST00000423941 LACTBL1A8MY62 500 aa20.1■□□□□ 0.81
HDAC6-205ENST00000423941 FSCN2O14926 492 aa20.1■□□□□ 0.81
HDAC6-205ENST00000423941 IGFBP4P22692 258 aa20.1■□□□□ 0.81
HDAC6-205ENST00000423941 KRT17Q04695 432 aa20.1■□□□□ 0.81
HDAC6-205ENST00000423941 SOX4Q06945 474 aaPredicted RBP20.1■□□□□ 0.81
HDAC6-205ENST00000423941 PDE12Q6L8Q7 609 aaKnown RBP20.1■□□□□ 0.81
HDAC6-205ENST00000423941 GBP4Q96PP9 640 aa20.1■□□□□ 0.81
HDAC6-205ENST00000423941 PAAF1Q9BRP4 392 aa20.1■□□□□ 0.81
HDAC6-205ENST00000423941 ASB7Q9H672 318 aa20.1■□□□□ 0.81
HDAC6-205ENST00000423941 RPF1Q9H9Y2 349 aaKnown RBP20.1■□□□□ 0.81
HDAC6-205ENST00000423941 AGPAT3Q9NRZ7 376 aa20.1■□□□□ 0.81
HDAC6-205ENST00000423941 SLC38A7Q9NVC3 462 aa20.1■□□□□ 0.81
HDAC6-205ENST00000423941 PRUNE2Q8WUY3 3088 aa20.1■□□□□ 0.81
HDAC6-205ENST00000423941 MYO7AQ13402 2215 aa20.1■□□□□ 0.81
HDAC6-205ENST00000423941 TMEM189-UBE2V1I3L0A0 370 aa20.09■□□□□ 0.81
HDAC6-205ENST00000423941 EXTL3O43909 919 aa20.09■□□□□ 0.81
HDAC6-205ENST00000423941 SLC34A2O95436 690 aa20.09■□□□□ 0.81
HDAC6-205ENST00000423941 ERVFC1P60507 584 aa20.09■□□□□ 0.81
HDAC6-205ENST00000423941 GLRA4Q5JXX5 417 aa20.09■□□□□ 0.81
HDAC6-205ENST00000423941 ARMCX5Q6P1M9 558 aa20.09■□□□□ 0.81
HDAC6-205ENST00000423941 CD300LGQ6UXG3 332 aa20.09■□□□□ 0.81
HDAC6-205ENST00000423941 NELFCDQ8IXH7 590 aa20.09■□□□□ 0.81
HDAC6-205ENST00000423941 GUF1Q8N442 669 aaKnown RBP20.09■□□□□ 0.81
HDAC6-205ENST00000423941 UROC1Q96N76 676 aa20.09■□□□□ 0.81
HDAC6-205ENST00000423941 COLEC11Q9BWP8 271 aa20.09■□□□□ 0.81
HDAC6-205ENST00000423941 DMAC2Q9NW81 257 aa20.09■□□□□ 0.81
HDAC6-205ENST00000423941 RMND1Q9NWS8 449 aa20.09■□□□□ 0.81
HDAC6-205ENST00000423941 STK39Q9UEW8 545 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms