RNA–Protein interactions for RNA: ENST00000421124.6

DDR1-233, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-233ENST00000421124 NT5C1B-RDH14C9J2C7 533 aa20.27■□□□□ 0.84
DDR1-233ENST00000421124 GRM6O15303 877 aa20.27■□□□□ 0.84
DDR1-233ENST00000421124 GARTP22102 1010 aa20.27■□□□□ 0.84
DDR1-233ENST00000421124 ADSSP30520 456 aa20.27■□□□□ 0.84
DDR1-233ENST00000421124 HOXD13P35453 343 aa20.27■□□□□ 0.84
DDR1-233ENST00000421124 TNFSF9P41273 254 aa20.27■□□□□ 0.84
DDR1-233ENST00000421124 PLCB3Q01970 1234 aa20.27■□□□□ 0.84
DDR1-233ENST00000421124 STK4Q13043 487 aa20.27■□□□□ 0.84
DDR1-233ENST00000421124 PTPROQ16827 1216 aa20.27■□□□□ 0.84
DDR1-233ENST00000421124 BMT2Q1RMZ1 405 aa20.27■□□□□ 0.84
DDR1-233ENST00000421124 XKR4Q5GH76 650 aa20.27■□□□□ 0.84
DDR1-233ENST00000421124 ALKAL1Q6UXT8 129 aa20.27■□□□□ 0.84
DDR1-233ENST00000421124 NELFCDQ8IXH7 590 aa20.27■□□□□ 0.84
DDR1-233ENST00000421124 ELOA2Q8IYF1 753 aaPredicted RBP20.27■□□□□ 0.84
DDR1-233ENST00000421124 KIAA0895Q8NCT3 520 aa20.27■□□□□ 0.84
DDR1-233ENST00000421124 SPPL3Q8TCT6 385 aa20.27■□□□□ 0.84
DDR1-233ENST00000421124 MRPL38Q96DV4 380 aaKnown RBP20.27■□□□□ 0.84
DDR1-233ENST00000421124 MTCH2Q9Y6C9 303 aa20.27■□□□□ 0.84
DDR1-233ENST00000421124 ALDH2P05091 517 aa20.26■□□□□ 0.83
DDR1-233ENST00000421124 CXCL8P10145 99 aa20.26■□□□□ 0.83
DDR1-233ENST00000421124 OR1G1P47890 313 aa20.26■□□□□ 0.83
DDR1-233ENST00000421124 UBE3AQ05086 875 aa20.26■□□□□ 0.83
DDR1-233ENST00000421124 TUSC3Q13454 348 aa20.26■□□□□ 0.83
DDR1-233ENST00000421124 SLC10A6Q3KNW5 377 aa20.26■□□□□ 0.83
DDR1-233ENST00000421124 GLRA4Q5JXX5 417 aa20.26■□□□□ 0.83
DDR1-233ENST00000421124 ZBTB41Q5SVQ8 909 aa20.26■□□□□ 0.83
DDR1-233ENST00000421124 PPP1R10Q96QC0 940 aaKnown RBP20.26■□□□□ 0.83
DDR1-233ENST00000421124 RPF1Q9H9Y2 349 aaKnown RBP20.26■□□□□ 0.83
DDR1-233ENST00000421124 PLEKHA5Q9HAU0 1116 aa20.26■□□□□ 0.83
DDR1-233ENST00000421124 CNTN3Q9P232 1028 aa20.26■□□□□ 0.83
DDR1-233ENST00000421124 CPSF3Q9UKF6 684 aaKnown RBP20.26■□□□□ 0.83
DDR1-233ENST00000421124 FAN1Q9Y2M0 1017 aa20.26■□□□□ 0.83
DDR1-233ENST00000421124 SMIM28A0A1B0GU29 152 aa20.25■□□□□ 0.83
DDR1-233ENST00000421124 NRP1O14786 923 aa20.25■□□□□ 0.83
DDR1-233ENST00000421124 MEFVO15553 781 aaPredicted RBP20.25■□□□□ 0.83
DDR1-233ENST00000421124 SMC2O95347 1197 aa20.25■□□□□ 0.83
DDR1-233ENST00000421124 KCNE1P15382 129 aa20.25■□□□□ 0.83
DDR1-233ENST00000421124 KRT17Q04695 432 aa20.25■□□□□ 0.83
DDR1-233ENST00000421124 NAB2Q15742 525 aa20.25■□□□□ 0.83
DDR1-233ENST00000421124 ENOX2Q16206 610 aaKnown RBP20.25■□□□□ 0.83
DDR1-233ENST00000421124 KNOP1Q1ED39 458 aaKnown RBP20.25■□□□□ 0.83
DDR1-233ENST00000421124 ARMCX5Q6P1M9 558 aa20.25■□□□□ 0.83
DDR1-233ENST00000421124 POF1BQ8WVV4 589 aa20.25■□□□□ 0.83
DDR1-233ENST00000421124 TMEM169Q96HH4 297 aa20.25■□□□□ 0.83
DDR1-233ENST00000421124 IGSF21Q96ID5 467 aa20.25■□□□□ 0.83
DDR1-233ENST00000421124 RMND1Q9NWS8 449 aa20.25■□□□□ 0.83
DDR1-233ENST00000421124 PUF60Q9UHX1 559 aaKnown RBP20.25■□□□□ 0.83
DDR1-233ENST00000421124 LZTS1Q9Y250 596 aa20.25■□□□□ 0.83
DDR1-233ENST00000421124 TTC26A0AVF1 554 aa20.24■□□□□ 0.83
DDR1-233ENST00000421124 TGFB1I1O43294 461 aa20.24■□□□□ 0.83
DDR1-233ENST00000421124 LDHAP00338 332 aaKnown RBP20.24■□□□□ 0.83
DDR1-233ENST00000421124 ACOT2P49753 483 aa20.24■□□□□ 0.83
DDR1-233ENST00000421124 PPP2R3AQ06190 1150 aa20.24■□□□□ 0.83
DDR1-233ENST00000421124 SMARCE1Q969G3 411 aa20.24■□□□□ 0.83
DDR1-233ENST00000421124 ZMAT2Q96NC0 199 aaKnown RBP20.24■□□□□ 0.83
DDR1-233ENST00000421124 GSDMAQ96QA5 445 aa20.24■□□□□ 0.83
DDR1-233ENST00000421124 CBWD1Q9BRT8 395 aa20.24■□□□□ 0.83
DDR1-233ENST00000421124 SLC38A7Q9NVC3 462 aa20.24■□□□□ 0.83
DDR1-233ENST00000421124 PRG3Q9Y2Y8 225 aaPredicted RBP20.24■□□□□ 0.83
DDR1-233ENST00000421124 KIAA0391O15091 583 aaKnown RBP20.23■□□□□ 0.83
DDR1-233ENST00000421124 DNAJB1P25685 340 aa20.23■□□□□ 0.83
DDR1-233ENST00000421124 SNRPFP62306 86 aaKnown RBP20.23■□□□□ 0.83
DDR1-233ENST00000421124 POU5F1Q01860 360 aaKnown RBP20.23■□□□□ 0.83
DDR1-233ENST00000421124 HS2ST1Q7LGA3 356 aa20.23■□□□□ 0.83
DDR1-233ENST00000421124 TMEM173Q86WV6 379 aaPredicted RBP20.23■□□□□ 0.83
DDR1-233ENST00000421124 MICALL1Q8N3F8 863 aa20.23■□□□□ 0.83
DDR1-233ENST00000421124 SPATA20Q8TB22 786 aa20.23■□□□□ 0.83
DDR1-233ENST00000421124 BCL7CQ8WUZ0 217 aaPredicted RBP20.23■□□□□ 0.83
DDR1-233ENST00000421124 ERCC4Q92889 916 aaPredicted RBP20.23■□□□□ 0.83
DDR1-233ENST00000421124 SAAL1Q96ER3 474 aa20.23■□□□□ 0.83
DDR1-233ENST00000421124 COLEC11Q9BWP8 271 aa20.23■□□□□ 0.83
DDR1-233ENST00000421124 PCIF1Q9H4Z3 704 aa20.23■□□□□ 0.83
DDR1-233ENST00000421124 TLR9Q9NR96 1032 aa20.23■□□□□ 0.83
DDR1-233ENST00000421124 AGPAT3Q9NRZ7 376 aa20.23■□□□□ 0.83
DDR1-233ENST00000421124 LMBRD1Q9NUN5 540 aa20.23■□□□□ 0.83
DDR1-233ENST00000421124 CGNQ9P2M7 1197 aaKnown RBP20.23■□□□□ 0.83
DDR1-233ENST00000421124 PCDHA5Q9Y5H7 936 aa20.23■□□□□ 0.83
DDR1-233ENST00000421124 MYO7AQ13402 2215 aa20.23■□□□□ 0.83
DDR1-233ENST00000421124 CASTOR2A6NHX0 329 aa20.22■□□□□ 0.83
DDR1-233ENST00000421124 LACTBL1A8MY62 500 aa20.22■□□□□ 0.83
DDR1-233ENST00000421124 GOLGA6L22H0YM25 854 aa20.22■□□□□ 0.83
DDR1-233ENST00000421124 KIF20AO95235 890 aa20.22■□□□□ 0.83
DDR1-233ENST00000421124 ADRB2P07550 413 aa20.22■□□□□ 0.83
DDR1-233ENST00000421124 CAMK1Q14012 370 aa20.22■□□□□ 0.83
DDR1-233ENST00000421124 TIGD5Q53EQ6 642 aa20.22■□□□□ 0.83
DDR1-233ENST00000421124 CRELD2Q6UXH1 353 aaPredicted RBP20.22■□□□□ 0.83
DDR1-233ENST00000421124 CD302Q8IX05 232 aa20.22■□□□□ 0.83
DDR1-233ENST00000421124 MAFAQ8NHW3 353 aaPredicted RBP20.22■□□□□ 0.83
DDR1-233ENST00000421124 FAM212AQ96EL1 285 aa20.22■□□□□ 0.83
DDR1-233ENST00000421124 UROC1Q96N76 676 aa20.22■□□□□ 0.83
DDR1-233ENST00000421124 TSPAN18Q96SJ8 248 aa20.22■□□□□ 0.83
DDR1-233ENST00000421124 FAM213AQ9BRX8 229 aa20.22■□□□□ 0.83
DDR1-233ENST00000421124 MARCH5Q9NX47 278 aa20.22■□□□□ 0.83
DDR1-233ENST00000421124 CACNG4Q9UBN1 327 aa20.22■□□□□ 0.83
DDR1-233ENST00000421124 EXTL3O43909 919 aa20.21■□□□□ 0.83
DDR1-233ENST00000421124 CSPG5O95196 566 aa20.21■□□□□ 0.83
DDR1-233ENST00000421124 HSP90AA2PQ14568 343 aaPredicted RBP20.21■□□□□ 0.83
DDR1-233ENST00000421124 DDX53Q86TM3 631 aaKnown RBP20.21■□□□□ 0.83
DDR1-233ENST00000421124 GPD1LQ8N335 351 aa20.21■□□□□ 0.83
DDR1-233ENST00000421124 ZSWIM2Q8NEG5 633 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms