RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 SP9P0CG40 484 aa18.62■□□□□ 0.57
UPF3AP3-201ENST00000420996 NTHL1P78549 312 aa18.62■□□□□ 0.57
UPF3AP3-201ENST00000420996 PRPF4BQ13523 1007 aaKnown RBP18.62■□□□□ 0.57
UPF3AP3-201ENST00000420996 MAPK6Q16659 721 aa18.62■□□□□ 0.57
UPF3AP3-201ENST00000420996 ME3Q16798 604 aa18.62■□□□□ 0.57
UPF3AP3-201ENST00000420996 ZC3H14Q6PJT7 736 aaKnown RBP18.62■□□□□ 0.57
UPF3AP3-201ENST00000420996 MTSS1LQ765P7 747 aa18.62■□□□□ 0.57
UPF3AP3-201ENST00000420996 PJA1Q8NG27 643 aa18.62■□□□□ 0.57
UPF3AP3-201ENST00000420996 GTF3C6Q969F1 213 aa18.62■□□□□ 0.57
UPF3AP3-201ENST00000420996 ADPGKQ9BRR6 497 aa18.62■□□□□ 0.57
UPF3AP3-201ENST00000420996 POLR3CQ9BUI4 534 aaPredicted RBP18.62■□□□□ 0.57
UPF3AP3-201ENST00000420996 TMEM60Q9H2L4 133 aa18.62■□□□□ 0.57
UPF3AP3-201ENST00000420996 DAXXQ9UER7 740 aaPredicted RBP18.62■□□□□ 0.57
UPF3AP3-201ENST00000420996 ACKR2O00590 384 aa18.61■□□□□ 0.57
UPF3AP3-201ENST00000420996 CCL16O15467 120 aa18.61■□□□□ 0.57
UPF3AP3-201ENST00000420996 ADAM12O43184 909 aa18.61■□□□□ 0.57
UPF3AP3-201ENST00000420996 MED24O75448 989 aa18.61■□□□□ 0.57
UPF3AP3-201ENST00000420996 PRKCBP05771 671 aa18.61■□□□□ 0.57
UPF3AP3-201ENST00000420996 POU2F2P09086 479 aa18.61■□□□□ 0.57
UPF3AP3-201ENST00000420996 RAB33AQ14088 237 aa18.61■□□□□ 0.57
UPF3AP3-201ENST00000420996 TRIM29Q14134 588 aa18.61■□□□□ 0.57
UPF3AP3-201ENST00000420996 TMEM132AQ24JP5 1023 aa18.61■□□□□ 0.57
UPF3AP3-201ENST00000420996 UVSSAQ2YD98 709 aa18.61■□□□□ 0.57
UPF3AP3-201ENST00000420996 NOSTRINQ8IVI9 506 aa18.61■□□□□ 0.57
UPF3AP3-201ENST00000420996 NSUN7Q8NE18 718 aaKnown RBP18.61■□□□□ 0.57
UPF3AP3-201ENST00000420996 FGF13Q92913 245 aa18.61■□□□□ 0.57
UPF3AP3-201ENST00000420996 FOXQ1Q9C009 403 aa18.61■□□□□ 0.57
UPF3AP3-201ENST00000420996 CXCL16Q9H2A7 254 aa18.61■□□□□ 0.57
UPF3AP3-201ENST00000420996 DCHS1Q96JQ0 3298 aa18.6■□□□□ 0.57
UPF3AP3-201ENST00000420996 CACNA1IQ9P0X4 2223 aa18.6■□□□□ 0.57
UPF3AP3-201ENST00000420996 LARGE1O95461 756 aa18.6■□□□□ 0.57
UPF3AP3-201ENST00000420996 GLULP15104 373 aa18.6■□□□□ 0.57
UPF3AP3-201ENST00000420996 CYP11B2P19099 503 aa18.6■□□□□ 0.57
UPF3AP3-201ENST00000420996 MCM7P33993 719 aa18.6■□□□□ 0.57
UPF3AP3-201ENST00000420996 NAMPTP43490 491 aa18.6■□□□□ 0.57
UPF3AP3-201ENST00000420996 AXDND1Q5T1B0 1012 aaPredicted RBP18.6■□□□□ 0.57
UPF3AP3-201ENST00000420996 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.6■□□□□ 0.57
UPF3AP3-201ENST00000420996 RTL10Q7L3V2 364 aa18.6■□□□□ 0.57
UPF3AP3-201ENST00000420996 BSNDQ8WZ55 320 aa18.6■□□□□ 0.57
UPF3AP3-201ENST00000420996 CCDC113Q9H0I3 377 aa18.6■□□□□ 0.57
UPF3AP3-201ENST00000420996 POLIQ9UNA4 740 aa18.6■□□□□ 0.57
UPF3AP3-201ENST00000420996 NOTCH4Q99466 2003 aa18.6■□□□□ 0.57
UPF3AP3-201ENST00000420996 TRIP11Q15643 1979 aa18.6■□□□□ 0.57
UPF3AP3-201ENST00000420996 KANSL1LA0AUZ9 987 aa18.59■□□□□ 0.57
UPF3AP3-201ENST00000420996 TMEM189-UBE2V1I3L0A0 370 aa18.59■□□□□ 0.57
UPF3AP3-201ENST00000420996 FGFR3P22607 806 aa18.59■□□□□ 0.57
UPF3AP3-201ENST00000420996 RPA1P27694 616 aa18.59■□□□□ 0.57
UPF3AP3-201ENST00000420996 OR1D2P34982 312 aa18.59■□□□□ 0.57
UPF3AP3-201ENST00000420996 RBM25P49756 843 aaKnown RBP18.59■□□□□ 0.57
UPF3AP3-201ENST00000420996 FOSBP53539 338 aa18.59■□□□□ 0.57
UPF3AP3-201ENST00000420996 PRKCQQ04759 706 aa18.59■□□□□ 0.57
UPF3AP3-201ENST00000420996 SNW1Q13573 536 aaKnown RBP18.59■□□□□ 0.57
UPF3AP3-201ENST00000420996 PPP2R5AQ15172 486 aa18.59■□□□□ 0.57
UPF3AP3-201ENST00000420996 PADI6Q6TGC4 694 aa18.59■□□□□ 0.57
UPF3AP3-201ENST00000420996 DEPTORQ8TB45 409 aa18.59■□□□□ 0.57
UPF3AP3-201ENST00000420996 ITFG1Q8TB96 612 aa18.59■□□□□ 0.57
UPF3AP3-201ENST00000420996 SLC7A14Q8TBB6 771 aa18.59■□□□□ 0.57
UPF3AP3-201ENST00000420996 DDX23Q9BUQ8 820 aaKnown RBP18.59■□□□□ 0.57
UPF3AP3-201ENST00000420996 USP20Q9Y2K6 914 aa18.59■□□□□ 0.57
UPF3AP3-201ENST00000420996 EP300Q09472 2414 aaPredicted RBP18.58■□□□□ 0.57
UPF3AP3-201ENST00000420996 ARHGEF35A5YM69 484 aa18.58■□□□□ 0.56
UPF3AP3-201ENST00000420996 LRRN2O75325 713 aa18.58■□□□□ 0.56
UPF3AP3-201ENST00000420996 LIG1P18858 919 aa18.58■□□□□ 0.56
UPF3AP3-201ENST00000420996 PFKPQ01813 784 aa18.58■□□□□ 0.56
UPF3AP3-201ENST00000420996 MLF2Q15773 248 aaPredicted RBP18.58■□□□□ 0.56
UPF3AP3-201ENST00000420996 DCAF4L1Q3SXM0 396 aa18.58■□□□□ 0.56
UPF3AP3-201ENST00000420996 SLC44A4Q53GD3 710 aa18.58■□□□□ 0.56
UPF3AP3-201ENST00000420996 EEF1DP3Q658K8 133 aa18.58■□□□□ 0.56
UPF3AP3-201ENST00000420996 ERMNQ8TAM6 284 aa18.58■□□□□ 0.56
UPF3AP3-201ENST00000420996 DNMT3BQ9UBC3 853 aaKnown RBP18.58■□□□□ 0.56
UPF3AP3-201ENST00000420996 MTRRQ9UBK8 725 aa18.58■□□□□ 0.56
UPF3AP3-201ENST00000420996 KCNH3Q9ULD8 1083 aa18.58■□□□□ 0.56
UPF3AP3-201ENST00000420996 GDAQ9Y2T3 454 aa18.58■□□□□ 0.56
UPF3AP3-201ENST00000420996 JAK2O60674 1132 aa18.57■□□□□ 0.56
UPF3AP3-201ENST00000420996 B3GAT3O94766 335 aa18.57■□□□□ 0.56
UPF3AP3-201ENST00000420996 EDN1P05305 212 aa18.57■□□□□ 0.56
UPF3AP3-201ENST00000420996 MUTP22033 750 aa18.57■□□□□ 0.56
UPF3AP3-201ENST00000420996 EFNA5P52803 228 aa18.57■□□□□ 0.56
UPF3AP3-201ENST00000420996 PABPC1LQ4VXU2 614 aaKnown RBP18.57■□□□□ 0.56
UPF3AP3-201ENST00000420996 RSPO2Q6UXX9 243 aaPredicted RBP18.57■□□□□ 0.56
UPF3AP3-201ENST00000420996 NPAS3Q8IXF0 933 aa18.57■□□□□ 0.56
UPF3AP3-201ENST00000420996 KIAA2013Q8IYS2 634 aa18.57■□□□□ 0.56
UPF3AP3-201ENST00000420996 MAML2Q8IZL2 1156 aaPredicted RBP18.57■□□□□ 0.56
UPF3AP3-201ENST00000420996 RUBCNQ92622 972 aa18.57■□□□□ 0.56
UPF3AP3-201ENST00000420996 RMDN1Q96DB5 314 aa18.57■□□□□ 0.56
UPF3AP3-201ENST00000420996 BORCS6Q96GS4 357 aa18.57■□□□□ 0.56
UPF3AP3-201ENST00000420996 PPP1R10Q96QC0 940 aaKnown RBP18.57■□□□□ 0.56
UPF3AP3-201ENST00000420996 BCO2Q9BYV7 579 aa18.57■□□□□ 0.56
UPF3AP3-201ENST00000420996 OSBPL6Q9BZF3 934 aa18.57■□□□□ 0.56
UPF3AP3-201ENST00000420996 HCFC1R1Q9NWW0 138 aa18.57■□□□□ 0.56
UPF3AP3-201ENST00000420996 BACE2Q9Y5Z0 518 aa18.57■□□□□ 0.56
UPF3AP3-201ENST00000420996 ZNF292O60281 2723 aa18.57■□□□□ 0.56
UPF3AP3-201ENST00000420996 PATJQ8NI35 1801 aa18.56■□□□□ 0.56
UPF3AP3-201ENST00000420996 TRAPPC3O43617 180 aa18.56■□□□□ 0.56
UPF3AP3-201ENST00000420996 IGFBP6P24592 240 aaPredicted RBP18.56■□□□□ 0.56
UPF3AP3-201ENST00000420996 SAFBQ15424 915 aaKnown RBP eCLIP18.56■□□□□ 0.56
UPF3AP3-201ENST00000420996 ZNF528Q3MIS6 628 aa18.56■□□□□ 0.56
UPF3AP3-201ENST00000420996 NT5DC1Q5TFE4 455 aa18.56■□□□□ 0.56
UPF3AP3-201ENST00000420996 CD300LGQ6UXG3 332 aa18.56■□□□□ 0.56
UPF3AP3-201ENST00000420996 APBB1IPQ7Z5R6 666 aaPredicted RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms