RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 ITGA8P53708 1063 aa16.22■□□□□ 0.19
SEMA3B-203ENST00000419007 SIX1Q15475 284 aaPredicted RBP16.22■□□□□ 0.19
SEMA3B-203ENST00000419007 LLGL2Q6P1M3 1020 aa16.22■□□□□ 0.19
SEMA3B-203ENST00000419007 TRMT10CQ7L0Y3 403 aaKnown RBP16.22■□□□□ 0.19
SEMA3B-203ENST00000419007 SRRM1Q8IYB3 904 aaKnown RBP16.22■□□□□ 0.19
SEMA3B-203ENST00000419007 THOC1Q96FV9 657 aaKnown RBP16.22■□□□□ 0.19
SEMA3B-203ENST00000419007 PRMT6Q96LA8 375 aaPredicted RBP16.22■□□□□ 0.19
SEMA3B-203ENST00000419007 PI4K2AQ9BTU6 479 aa16.22■□□□□ 0.19
SEMA3B-203ENST00000419007 KCNH7Q9NS40 1196 aa16.22■□□□□ 0.19
SEMA3B-203ENST00000419007 TCEAL9Q9UHQ7 104 aa16.22■□□□□ 0.19
SEMA3B-203ENST00000419007 STX2P32856 288 aa16.21■□□□□ 0.19
SEMA3B-203ENST00000419007 TRAF1Q13077 416 aa16.21■□□□□ 0.19
SEMA3B-203ENST00000419007 KLHL29Q96CT2 875 aa16.21■□□□□ 0.19
SEMA3B-203ENST00000419007 HOMER2Q9NSB8 354 aa16.21■□□□□ 0.19
SEMA3B-203ENST00000419007 GTF3C4Q9UKN8 822 aa16.21■□□□□ 0.19
SEMA3B-203ENST00000419007 KLRG2A4D1S0 409 aaPredicted RBP16.21■□□□□ 0.19
SEMA3B-203ENST00000419007 GSTA1P08263 222 aa16.21■□□□□ 0.19
SEMA3B-203ENST00000419007 SNRNP35Q16560 246 aaKnown RBP16.21■□□□□ 0.19
SEMA3B-203ENST00000419007 CYP1B1Q16678 543 aa16.21■□□□□ 0.19
SEMA3B-203ENST00000419007 DACT2Q5SW24 774 aa16.21■□□□□ 0.19
SEMA3B-203ENST00000419007 ZFYVE27Q5T4F4 411 aa16.21■□□□□ 0.19
SEMA3B-203ENST00000419007 LDHDQ86WU2 507 aa16.21■□□□□ 0.19
SEMA3B-203ENST00000419007 AAASQ9NRG9 546 aa16.21■□□□□ 0.19
SEMA3B-203ENST00000419007 PLS3P13797 630 aa16.21■□□□□ 0.19
SEMA3B-203ENST00000419007 ATF2P15336 505 aa16.21■□□□□ 0.19
SEMA3B-203ENST00000419007 RARRES1P49788 294 aa16.21■□□□□ 0.19
SEMA3B-203ENST00000419007 NAA25Q14CX7 972 aa16.21■□□□□ 0.19
SEMA3B-203ENST00000419007 STRIP1Q5VSL9 837 aa16.21■□□□□ 0.19
SEMA3B-203ENST00000419007 MORC4Q8TE76 937 aa16.21■□□□□ 0.19
SEMA3B-203ENST00000419007 PRCCQ92733 491 aaPredicted RBP16.21■□□□□ 0.19
SEMA3B-203ENST00000419007 C9orf72Q96LT7 481 aa16.21■□□□□ 0.19
SEMA3B-203ENST00000419007 CAMKK2Q96RR4 588 aa16.21■□□□□ 0.19
SEMA3B-203ENST00000419007 TMEM109Q9BVC6 243 aa16.21■□□□□ 0.19
SEMA3B-203ENST00000419007 STRA6Q9BX79 667 aa16.21■□□□□ 0.19
SEMA3B-203ENST00000419007 ROPN1BQ9BZX4 212 aaPredicted RBP16.21■□□□□ 0.19
SEMA3B-203ENST00000419007 ROPN1Q9HAT0 212 aaPredicted RBP16.21■□□□□ 0.19
SEMA3B-203ENST00000419007 STK32BQ9NY57 414 aa16.21■□□□□ 0.19
SEMA3B-203ENST00000419007 ANAPC5Q9UJX4 755 aa16.21■□□□□ 0.19
SEMA3B-203ENST00000419007 IGF2BP3O00425 579 aaKnown RBP eCLIP16.2■□□□□ 0.18
SEMA3B-203ENST00000419007 P4HBP07237 508 aaKnown RBP16.2■□□□□ 0.18
SEMA3B-203ENST00000419007 CPXCR1Q8N123 301 aa16.2■□□□□ 0.18
SEMA3B-203ENST00000419007 TAS1R2Q8TE23 839 aa16.2■□□□□ 0.18
SEMA3B-203ENST00000419007 CHURC1Q8WUH1 139 aa16.2■□□□□ 0.18
SEMA3B-203ENST00000419007 AKT1S1Q96B36 256 aa16.2■□□□□ 0.18
SEMA3B-203ENST00000419007 NT5C1BQ96P26 610 aa16.2■□□□□ 0.18
SEMA3B-203ENST00000419007 MXRA8Q9BRK3 442 aa16.2■□□□□ 0.18
SEMA3B-203ENST00000419007 PNMA3Q9UL41 463 aa16.2■□□□□ 0.18
SEMA3B-203ENST00000419007 P4HA2O15460 535 aa16.2■□□□□ 0.18
SEMA3B-203ENST00000419007 GAS8O95995 478 aa16.2■□□□□ 0.18
SEMA3B-203ENST00000419007 CYP1A2P05177 515 aa16.2■□□□□ 0.18
SEMA3B-203ENST00000419007 SSTR3P32745 418 aaPredicted RBP16.2■□□□□ 0.18
SEMA3B-203ENST00000419007 PLA2G4FQ68DD2 849 aa16.2■□□□□ 0.18
SEMA3B-203ENST00000419007 MFSD5Q6N075 450 aa16.2■□□□□ 0.18
SEMA3B-203ENST00000419007 CYP4F22Q6NT55 531 aa16.2■□□□□ 0.18
SEMA3B-203ENST00000419007 FAM47EQ6ZV65 393 aa16.2■□□□□ 0.18
SEMA3B-203ENST00000419007 PRUNE1Q86TP1 453 aa16.2■□□□□ 0.18
SEMA3B-203ENST00000419007 IL31RAQ8NI17 732 aa16.2■□□□□ 0.18
SEMA3B-203ENST00000419007 CPA5Q8WXQ8 436 aa16.2■□□□□ 0.18
SEMA3B-203ENST00000419007 VTI1AQ96AJ9 217 aa16.2■□□□□ 0.18
SEMA3B-203ENST00000419007 SNF8Q96H20 258 aa16.2■□□□□ 0.18
SEMA3B-203ENST00000419007 AGBL1Q96MI9 1066 aa16.2■□□□□ 0.18
SEMA3B-203ENST00000419007 TGS1Q96RS0 853 aaKnown RBP16.2■□□□□ 0.18
SEMA3B-203ENST00000419007 LRRC19Q9H756 370 aa16.2■□□□□ 0.18
SEMA3B-203ENST00000419007 UVRAGQ9P2Y5 699 aa16.2■□□□□ 0.18
SEMA3B-203ENST00000419007 SCP2P22307 547 aa16.2■□□□□ 0.18
SEMA3B-203ENST00000419007 ATP5DP30049 168 aa16.2■□□□□ 0.18
SEMA3B-203ENST00000419007 CDR2Q01850 454 aa16.2■□□□□ 0.18
SEMA3B-203ENST00000419007 MYBPC2Q14324 1141 aa16.2■□□□□ 0.18
SEMA3B-203ENST00000419007 KRT39Q6A163 491 aa16.2■□□□□ 0.18
SEMA3B-203ENST00000419007 VSTM1Q6UX27 236 aa16.2■□□□□ 0.18
SEMA3B-203ENST00000419007 SHC3Q92529 594 aa16.2■□□□□ 0.18
SEMA3B-203ENST00000419007 KIFAP3Q92845 792 aa16.2■□□□□ 0.18
SEMA3B-203ENST00000419007 CCDC134Q9H6E4 229 aa16.2■□□□□ 0.18
SEMA3B-203ENST00000419007 TRIM33Q9UPN9 1127 aa16.2■□□□□ 0.18
SEMA3B-203ENST00000419007 TTC4O95801 387 aa16.19■□□□□ 0.18
SEMA3B-203ENST00000419007 MPP2Q14168 576 aa16.19■□□□□ 0.18
SEMA3B-203ENST00000419007 SPATA21Q7Z572 469 aa16.19■□□□□ 0.18
SEMA3B-203ENST00000419007 CYP4X1Q8N118 509 aa16.19■□□□□ 0.18
SEMA3B-203ENST00000419007 MRRFQ96E11 262 aaKnown RBP16.19■□□□□ 0.18
SEMA3B-203ENST00000419007 SERPINB12Q96P63 405 aa16.19■□□□□ 0.18
SEMA3B-203ENST00000419007 USTQ9Y2C2 406 aa16.19■□□□□ 0.18
SEMA3B-203ENST00000419007 NQO1P15559 274 aaKnown RBP16.19■□□□□ 0.18
SEMA3B-203ENST00000419007 ITIH2P19823 946 aa16.19■□□□□ 0.18
SEMA3B-203ENST00000419007 YWHABP31946 246 aaKnown RBP16.19■□□□□ 0.18
SEMA3B-203ENST00000419007 ALDH5A1P51649 535 aaPredicted RBP16.19■□□□□ 0.18
SEMA3B-203ENST00000419007 NCALDP61601 193 aa16.19■□□□□ 0.18
SEMA3B-203ENST00000419007 XKR9Q5GH70 373 aa16.19■□□□□ 0.18
SEMA3B-203ENST00000419007 ZNF365Q70YC5 407 aa16.19■□□□□ 0.18
SEMA3B-203ENST00000419007 HERPUD2Q9BSE4 406 aa16.19■□□□□ 0.18
SEMA3B-203ENST00000419007 TACO1Q9BSH4 297 aaKnown RBP16.19■□□□□ 0.18
SEMA3B-203ENST00000419007 NKIRAS1Q9NYS0 192 aa16.19■□□□□ 0.18
SEMA3B-203ENST00000419007 WHRNQ9P202 907 aa16.19■□□□□ 0.18
SEMA3B-203ENST00000419007 CCPG1Q9ULG6 757 aa16.19■□□□□ 0.18
SEMA3B-203ENST00000419007 R3HDM2Q9Y2K5 976 aaKnown RBP16.19■□□□□ 0.18
SEMA3B-203ENST00000419007 CFAP73A6NFT4 308 aa16.18■□□□□ 0.18
SEMA3B-203ENST00000419007 A8MUI8 341 aa16.18■□□□□ 0.18
SEMA3B-203ENST00000419007 MTA2O94776 668 aa16.18■□□□□ 0.18
SEMA3B-203ENST00000419007 MUTP22033 750 aa16.18■□□□□ 0.18
SEMA3B-203ENST00000419007 QARSP47897 775 aaKnown RBP16.18■□□□□ 0.18
SEMA3B-203ENST00000419007 HP1BP3Q5SSJ5 553 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms