RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 PNOCQ13519 176 aa25.17■■□□□ 1.62
SMARCB1-205ENST00000417137 SEZ6Q53EL9 994 aa25.17■■□□□ 1.62
SMARCB1-205ENST00000417137 XKR4Q5GH76 650 aa25.17■■□□□ 1.62
SMARCB1-205ENST00000417137 SCFD1Q8WVM8 642 aa25.17■■□□□ 1.62
SMARCB1-205ENST00000417137 MRPL38Q96DV4 380 aaKnown RBP25.17■■□□□ 1.62
SMARCB1-205ENST00000417137 TMEM169Q96HH4 297 aa25.17■■□□□ 1.62
SMARCB1-205ENST00000417137 SNX27Q96L92 541 aa25.17■■□□□ 1.62
SMARCB1-205ENST00000417137 COLEC11Q9BWP8 271 aa25.17■■□□□ 1.62
SMARCB1-205ENST00000417137 SLC38A7Q9NVC3 462 aa25.17■■□□□ 1.62
SMARCB1-205ENST00000417137 CGNQ9P2M7 1197 aaKnown RBP25.17■■□□□ 1.62
SMARCB1-205ENST00000417137 STK39Q9UEW8 545 aa25.17■■□□□ 1.62
SMARCB1-205ENST00000417137 MTCH2Q9Y6C9 303 aa25.17■■□□□ 1.62
SMARCB1-205ENST00000417137 SMIM28A0A1B0GU29 152 aa25.16■■□□□ 1.62
SMARCB1-205ENST00000417137 TISP43B9A030 160 aa25.16■■□□□ 1.62
SMARCB1-205ENST00000417137 GRM6O15303 877 aa25.16■■□□□ 1.62
SMARCB1-205ENST00000417137 ADSSP30520 456 aa25.16■■□□□ 1.62
SMARCB1-205ENST00000417137 PBX3P40426 434 aa25.16■■□□□ 1.62
SMARCB1-205ENST00000417137 OR1G1P47890 313 aa25.16■■□□□ 1.62
SMARCB1-205ENST00000417137 SLC11A1P49279 550 aa25.16■■□□□ 1.62
SMARCB1-205ENST00000417137 TUSC3Q13454 348 aa25.16■■□□□ 1.62
SMARCB1-205ENST00000417137 BMT2Q1RMZ1 405 aa25.16■■□□□ 1.62
SMARCB1-205ENST00000417137 SLC10A6Q3KNW5 377 aa25.16■■□□□ 1.62
SMARCB1-205ENST00000417137 ARMCX5Q6P1M9 558 aa25.16■■□□□ 1.62
SMARCB1-205ENST00000417137 HS2ST1Q7LGA3 356 aa25.16■■□□□ 1.62
SMARCB1-205ENST00000417137 CD302Q8IX05 232 aa25.16■■□□□ 1.62
SMARCB1-205ENST00000417137 POF1BQ8WVV4 589 aa25.16■■□□□ 1.62
SMARCB1-205ENST00000417137 GSDMAQ96QA5 445 aa25.16■■□□□ 1.62
SMARCB1-205ENST00000417137 TSPAN18Q96SJ8 248 aa25.16■■□□□ 1.62
SMARCB1-205ENST00000417137 GTPBP4Q9BZE4 634 aaKnown RBP25.16■■□□□ 1.62
SMARCB1-205ENST00000417137 CNTN3Q9P232 1028 aa25.16■■□□□ 1.62
SMARCB1-205ENST00000417137 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.16■■□□□ 1.62
SMARCB1-205ENST00000417137 RALGAPA2Q2PPJ7 1873 aa25.15■■□□□ 1.62
SMARCB1-205ENST00000417137 NT5C1B-RDH14C9J2C7 533 aa25.15■■□□□ 1.62
SMARCB1-205ENST00000417137 NRP1O14786 923 aa25.15■■□□□ 1.62
SMARCB1-205ENST00000417137 KCNE1P15382 129 aa25.15■■□□□ 1.62
SMARCB1-205ENST00000417137 PPP2R3AQ06190 1150 aa25.15■■□□□ 1.62
SMARCB1-205ENST00000417137 HSP90AA2PQ14568 343 aaPredicted RBP25.15■■□□□ 1.62
SMARCB1-205ENST00000417137 BMS1Q14692 1282 aaKnown RBP25.15■■□□□ 1.62
SMARCB1-205ENST00000417137 KNOP1Q1ED39 458 aaKnown RBP25.15■■□□□ 1.62
SMARCB1-205ENST00000417137 NELFCDQ8IXH7 590 aa25.15■■□□□ 1.62
SMARCB1-205ENST00000417137 SMARCE1Q969G3 411 aa25.15■■□□□ 1.62
SMARCB1-205ENST00000417137 IGSF21Q96ID5 467 aa25.15■■□□□ 1.62
SMARCB1-205ENST00000417137 COL25A1Q9BXS0 654 aaPredicted RBP25.15■■□□□ 1.62
SMARCB1-205ENST00000417137 IKZF4Q9H2S9 585 aa25.15■■□□□ 1.62
SMARCB1-205ENST00000417137 CPSF3Q9UKF6 684 aaKnown RBP25.15■■□□□ 1.62
SMARCB1-205ENST00000417137 FAM189A1O60320 539 aa25.14■■□□□ 1.62
SMARCB1-205ENST00000417137 CXCL8P10145 99 aa25.14■■□□□ 1.62
SMARCB1-205ENST00000417137 HOXD13P35453 343 aa25.14■■□□□ 1.62
SMARCB1-205ENST00000417137 TNFSF9P41273 254 aa25.14■■□□□ 1.62
SMARCB1-205ENST00000417137 ACOT2P49753 483 aa25.14■■□□□ 1.62
SMARCB1-205ENST00000417137 PDE12Q6L8Q7 609 aaKnown RBP25.14■■□□□ 1.62
SMARCB1-205ENST00000417137 KIAA0895Q8NCT3 520 aa25.14■■□□□ 1.62
SMARCB1-205ENST00000417137 GOLGA5Q8TBA6 731 aa25.14■■□□□ 1.62
SMARCB1-205ENST00000417137 PPP1R10Q96QC0 940 aaKnown RBP25.14■■□□□ 1.62
SMARCB1-205ENST00000417137 TTC26A0AVF1 554 aa25.13■■□□□ 1.61
SMARCB1-205ENST00000417137 GLRA4Q5JXX5 417 aa25.13■■□□□ 1.61
SMARCB1-205ENST00000417137 MICAL1Q8TDZ2 1067 aa25.13■■□□□ 1.61
SMARCB1-205ENST00000417137 UROC1Q96N76 676 aa25.13■■□□□ 1.61
SMARCB1-205ENST00000417137 CXCL16Q9H2A7 254 aa25.13■■□□□ 1.61
SMARCB1-205ENST00000417137 KIAA1586Q9HCI6 787 aa25.13■■□□□ 1.61
SMARCB1-205ENST00000417137 PCDHA5Q9Y5H7 936 aa25.13■■□□□ 1.61
SMARCB1-205ENST00000417137 UNC80Q8N2C7 3258 aa25.13■■□□□ 1.61
SMARCB1-205ENST00000417137 XPOTO43592 962 aaKnown RBP25.12■■□□□ 1.61
SMARCB1-205ENST00000417137 EXTL3O43909 919 aa25.12■■□□□ 1.61
SMARCB1-205ENST00000417137 B4GALT3O60512 393 aa25.12■■□□□ 1.61
SMARCB1-205ENST00000417137 ADRB2P07550 413 aa25.12■■□□□ 1.61
SMARCB1-205ENST00000417137 ENOX2Q16206 610 aaKnown RBP25.12■■□□□ 1.61
SMARCB1-205ENST00000417137 TIGD5Q53EQ6 642 aa25.12■■□□□ 1.61
SMARCB1-205ENST00000417137 ZBTB41Q5SVQ8 909 aa25.12■■□□□ 1.61
SMARCB1-205ENST00000417137 DDX53Q86TM3 631 aaKnown RBP25.12■■□□□ 1.61
SMARCB1-205ENST00000417137 SPATA20Q8TB22 786 aa25.12■■□□□ 1.61
SMARCB1-205ENST00000417137 FAM212AQ96EL1 285 aa25.12■■□□□ 1.61
SMARCB1-205ENST00000417137 DDX27Q96GQ7 796 aaKnown RBP25.12■■□□□ 1.61
SMARCB1-205ENST00000417137 CBWD1Q9BRT8 395 aa25.12■■□□□ 1.61
SMARCB1-205ENST00000417137 FAM213AQ9BRX8 229 aa25.12■■□□□ 1.61
SMARCB1-205ENST00000417137 PCIF1Q9H4Z3 704 aa25.12■■□□□ 1.61
SMARCB1-205ENST00000417137 ASB7Q9H672 318 aa25.12■■□□□ 1.61
SMARCB1-205ENST00000417137 TLR9Q9NR96 1032 aa25.12■■□□□ 1.61
SMARCB1-205ENST00000417137 AGPAT3Q9NRZ7 376 aa25.12■■□□□ 1.61
SMARCB1-205ENST00000417137 PRG3Q9Y2Y8 225 aaPredicted RBP25.12■■□□□ 1.61
SMARCB1-205ENST00000417137 LACTBL1A8MY62 500 aa25.11■■□□□ 1.61
SMARCB1-205ENST00000417137 TGFB1I1O43294 461 aa25.11■■□□□ 1.61
SMARCB1-205ENST00000417137 NAB2Q15742 525 aa25.11■■□□□ 1.61
SMARCB1-205ENST00000417137 GPD1LQ8N335 351 aa25.11■■□□□ 1.61
SMARCB1-205ENST00000417137 MICALL1Q8N3F8 863 aa25.11■■□□□ 1.61
SMARCB1-205ENST00000417137 MAFAQ8NHW3 353 aaPredicted RBP25.11■■□□□ 1.61
SMARCB1-205ENST00000417137 PPP2R3CQ969Q6 453 aa25.11■■□□□ 1.61
SMARCB1-205ENST00000417137 ZMAT2Q96NC0 199 aaKnown RBP25.11■■□□□ 1.61
SMARCB1-205ENST00000417137 NLRC5Q86WI3 1866 aa25.11■■□□□ 1.61
SMARCB1-205ENST00000417137 CHD9Q3L8U1 2897 aa25.11■■□□□ 1.61
SMARCB1-205ENST00000417137 CASTOR2A6NHX0 329 aa25.1■■□□□ 1.61
SMARCB1-205ENST00000417137 TADA2AO75478 443 aa25.1■■□□□ 1.61
SMARCB1-205ENST00000417137 IL18RAPO95256 599 aa25.1■■□□□ 1.61
SMARCB1-205ENST00000417137 DNAJB1P25685 340 aa25.1■■□□□ 1.61
SMARCB1-205ENST00000417137 NOC3LQ8WTT2 800 aaKnown RBP25.1■■□□□ 1.61
SMARCB1-205ENST00000417137 SAAL1Q96ER3 474 aa25.1■■□□□ 1.61
SMARCB1-205ENST00000417137 KIF12Q96FN5 646 aa25.1■■□□□ 1.61
SMARCB1-205ENST00000417137 NGRNQ9NPE2 291 aaKnown RBP25.1■■□□□ 1.61
SMARCB1-205ENST00000417137 LMBRD1Q9NUN5 540 aa25.1■■□□□ 1.61
SMARCB1-205ENST00000417137 HSPBP1Q9NZL4 362 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms