RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 DDX39AO00148 427 aaKnown RBP5.53□□□□□ -1.52
VPS41-205ENST00000414632 TERTO14746 1132 aaKnown RBP5.53□□□□□ -1.52
VPS41-205ENST00000414632 RGS13O14921 159 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 NKRFO15226 690 aaKnown RBP eCLIP5.53□□□□□ -1.52
VPS41-205ENST00000414632 TMPRSS2O15393 492 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 ZEB2O60315 1214 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 EIF5BO60841 1220 aaKnown RBP5.53□□□□□ -1.52
VPS41-205ENST00000414632 ATP9AO75110 1047 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 CLTBP09497 229 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 ARP10275 920 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 CAPN2P17655 700 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 ITGB5P18084 799 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 AMPD1P23109 780 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 ITGB8P26012 769 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 NTF4P34130 210 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 MAGEA10P43363 369 aaPredicted RBP5.53□□□□□ -1.52
VPS41-205ENST00000414632 NLRP5P59047 1200 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 PURAQ00577 322 aaKnown RBP5.53□□□□□ -1.52
VPS41-205ENST00000414632 KRT76Q01546 638 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 GUCY1B3Q02153 619 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 ITGA7Q13683 1181 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 SNX17Q15036 470 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 ANKRD1Q15327 319 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 HSDL1Q3SXM5 330 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 ZC3H12BQ5HYM0 836 aaKnown RBP5.53□□□□□ -1.52
VPS41-205ENST00000414632 UTP14CQ5TAP6 766 aaKnown RBP5.53□□□□□ -1.52
VPS41-205ENST00000414632 CPLX2Q6PUV4 134 aaKnown RBP5.53□□□□□ -1.52
VPS41-205ENST00000414632 DHX37Q8IY37 1157 aaKnown RBP5.53□□□□□ -1.52
VPS41-205ENST00000414632 TMEM192Q8IY95 271 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 SAMD3Q8N6K7 520 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 ZNF713Q8N859 430 aaPredicted RBP5.53□□□□□ -1.52
VPS41-205ENST00000414632 RNF214Q8ND24 703 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 NSUN7Q8NE18 718 aaKnown RBP5.53□□□□□ -1.52
VPS41-205ENST00000414632 CCDC148Q8NFR7 591 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 CCDC12Q8WUD4 166 aaPredicted RBP5.53□□□□□ -1.52
VPS41-205ENST00000414632 TRIM43Q96BQ3 446 aaPredicted RBP5.53□□□□□ -1.52
VPS41-205ENST00000414632 IL17RAQ96F46 866 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 SGSM3Q96HU1 749 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 SPATA33Q96N06 139 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 SLC6A18Q96N87 628 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 INPP4AQ96PE3 977 aaPredicted RBP5.53□□□□□ -1.52
VPS41-205ENST00000414632 MTG1Q9BT17 334 aaPredicted RBP5.53□□□□□ -1.52
VPS41-205ENST00000414632 TMPRSS13Q9BYE2 586 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 MAF1Q9H063 256 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 ZMYND12Q9H0C1 365 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 TRPV6Q9H1D0 765 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 FBRSQ9HAH7 460 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 MLXIPQ9HAP2 919 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 UPF2Q9HAU5 1272 aaKnown RBP5.53□□□□□ -1.52
VPS41-205ENST00000414632 C6orf50Q9HD87 102 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 PDLIM7Q9NR12 457 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 TRMT13Q9NUP7 481 aaKnown RBP5.53□□□□□ -1.52
VPS41-205ENST00000414632 ORC3Q9UBD5 711 aaPredicted RBP5.53□□□□□ -1.52
VPS41-205ENST00000414632 SUCOQ9UBS9 1254 aaKnown RBP5.53□□□□□ -1.52
VPS41-205ENST00000414632 PLAAQ9Y263 795 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 Q9Y3F1 56 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 ARID2Q68CP9 1835 aa5.53□□□□□ -1.52
VPS41-205ENST00000414632 UMODL1Q5DID0 1318 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 EVPLQ92817 2033 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 A0A1W2PQU0 124 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 ESYT2A0FGR8 921 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 ANKRD34BA5PLL1 514 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 FAM86B1E9PN63 330 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 ARVCFO00192 962 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 AGRPO00253 132 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 NOP56O00567 594 aaKnown RBP5.52□□□□□ -1.53
VPS41-205ENST00000414632 FIBPO43427 364 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 B4GALT4O60513 344 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 CDKL5O76039 1030 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 UBOX5O94941 541 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 FAM86B2P0C5J1 330 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 CYP2C9P11712 490 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 FDPSP14324 419 aaKnown RBP5.52□□□□□ -1.53
VPS41-205ENST00000414632 L1CAMP32004 1257 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 GBP1P32455 592 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 SREBF1P36956 1147 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 CDK7P50613 346 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 NKX3-2P78367 333 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 MTMR1Q13613 665 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 CBX2Q14781 532 aaPredicted RBP5.52□□□□□ -1.53
VPS41-205ENST00000414632 NKG7Q16617 165 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 DGKDQ16760 1214 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 BRDTQ58F21 947 aaPredicted RBP5.52□□□□□ -1.53
VPS41-205ENST00000414632 CELF3Q5SZQ8 465 aaKnown RBP5.52□□□□□ -1.53
VPS41-205ENST00000414632 FOXB2Q5VYV0 432 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 NLRX1Q86UT6 975 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 FAM126BQ8IXS8 530 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 BLIDQ8IZY5 108 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 DTWD1Q8N5C7 304 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 KAT2BQ92831 832 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 BADQ92934 168 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 GJA10Q969M2 543 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 ZNF775Q96BV0 537 aaPredicted RBP5.52□□□□□ -1.53
VPS41-205ENST00000414632 CCDC74BQ96LY2 380 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 FANCD2OSQ96PS1 177 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 DPH2Q9BQC3 489 aaPredicted RBP5.52□□□□□ -1.53
VPS41-205ENST00000414632 MXRA8Q9BRK3 442 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 RUSC1Q9BVN2 902 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 DDX56Q9NY93 547 aaKnown RBP5.52□□□□□ -1.53
VPS41-205ENST00000414632 KLHL42Q9P2K6 505 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms