RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 FAM26FQ5R3K3 315 aa13.08□□□□□ -0.32
NEDD1-202ENST00000411739 TAS1R1Q7RTX1 841 aa13.08□□□□□ -0.32
NEDD1-202ENST00000411739 APBB1IPQ7Z5R6 666 aaPredicted RBP13.08□□□□□ -0.32
NEDD1-202ENST00000411739 NELFCDQ8IXH7 590 aa13.08□□□□□ -0.32
NEDD1-202ENST00000411739 C18orf25Q96B23 403 aaPredicted RBP13.08□□□□□ -0.32
NEDD1-202ENST00000411739 B3GALT6Q96L58 329 aa13.08□□□□□ -0.32
NEDD1-202ENST00000411739 TCF25Q9BQ70 676 aa13.08□□□□□ -0.32
NEDD1-202ENST00000411739 PYM1Q9BRP8 204 aaKnown RBP13.08□□□□□ -0.32
NEDD1-202ENST00000411739 PCIF1Q9H4Z3 704 aa13.08□□□□□ -0.32
NEDD1-202ENST00000411739 MARCH5Q9NX47 278 aa13.08□□□□□ -0.32
NEDD1-202ENST00000411739 PCDHB13Q9Y5F0 798 aa13.08□□□□□ -0.32
NEDD1-202ENST00000411739 A0A0B4J269 797 aa13.07□□□□□ -0.32
NEDD1-202ENST00000411739 HIDE1A8MVS5 230 aa13.07□□□□□ -0.32
NEDD1-202ENST00000411739 PIGRP01833 764 aa13.07□□□□□ -0.32
NEDD1-202ENST00000411739 RBM10P98175 930 aaKnown RBP13.07□□□□□ -0.32
NEDD1-202ENST00000411739 PLCB3Q01970 1234 aa13.07□□□□□ -0.32
NEDD1-202ENST00000411739 SOX4Q06945 474 aaPredicted RBP13.07□□□□□ -0.32
NEDD1-202ENST00000411739 GRIK3Q13003 919 aa13.07□□□□□ -0.32
NEDD1-202ENST00000411739 NAB2Q15742 525 aa13.07□□□□□ -0.32
NEDD1-202ENST00000411739 KMT5BQ4FZB7 885 aa13.07□□□□□ -0.32
NEDD1-202ENST00000411739 TMC7Q7Z402 723 aa13.07□□□□□ -0.32
NEDD1-202ENST00000411739 VPS52Q8N1B4 723 aa13.07□□□□□ -0.32
NEDD1-202ENST00000411739 SAAL1Q96ER3 474 aa13.07□□□□□ -0.32
NEDD1-202ENST00000411739 ENTPD7Q9NQZ7 604 aa13.07□□□□□ -0.32
NEDD1-202ENST00000411739 TLR9Q9NR96 1032 aa13.07□□□□□ -0.32
NEDD1-202ENST00000411739 GOLGA8IPA6NC78 632 aa13.07□□□□□ -0.32
NEDD1-202ENST00000411739 GOLGA8JA6NMD2 632 aa13.07□□□□□ -0.32
NEDD1-202ENST00000411739 TFF2Q03403 129 aa13.07□□□□□ -0.32
NEDD1-202ENST00000411739 SNW1Q13573 536 aaKnown RBP13.07□□□□□ -0.32
NEDD1-202ENST00000411739 CNNM4Q6P4Q7 775 aa13.07□□□□□ -0.32
NEDD1-202ENST00000411739 ALKAL1Q6UXT8 129 aa13.07□□□□□ -0.32
NEDD1-202ENST00000411739 FMR1NBQ8N0W7 255 aaPredicted RBP13.07□□□□□ -0.32
NEDD1-202ENST00000411739 POMGNT1Q8WZA1 660 aa13.07□□□□□ -0.32
NEDD1-202ENST00000411739 SNX27Q96L92 541 aa13.07□□□□□ -0.32
NEDD1-202ENST00000411739 IPO9Q96P70 1041 aaKnown RBP13.07□□□□□ -0.32
NEDD1-202ENST00000411739 LMCD1Q9NZU5 365 aa13.07□□□□□ -0.32
NEDD1-202ENST00000411739 PUF60Q9UHX1 559 aaKnown RBP13.07□□□□□ -0.32
NEDD1-202ENST00000411739 TDRD15B5MCY1 1934 aaKnown RBP13.07□□□□□ -0.32
NEDD1-202ENST00000411739 ATG2AQ2TAZ0 1938 aa13.06□□□□□ -0.32
NEDD1-202ENST00000411739 FAM189A1O60320 539 aa13.06□□□□□ -0.32
NEDD1-202ENST00000411739 NR1I2O75469 434 aa13.06□□□□□ -0.32
NEDD1-202ENST00000411739 PPM1AP35813 382 aa13.06□□□□□ -0.32
NEDD1-202ENST00000411739 EHHADHQ08426 723 aa13.06□□□□□ -0.32
NEDD1-202ENST00000411739 STK4Q13043 487 aa13.06□□□□□ -0.32
NEDD1-202ENST00000411739 PNOCQ13519 176 aa13.06□□□□□ -0.32
NEDD1-202ENST00000411739 CSPP1Q1MSJ5 1256 aa13.06□□□□□ -0.32
NEDD1-202ENST00000411739 SLC17A8Q8NDX2 589 aa13.06□□□□□ -0.32
NEDD1-202ENST00000411739 KCNN1Q92952 543 aa13.06□□□□□ -0.32
NEDD1-202ENST00000411739 PPP1R10Q96QC0 940 aaKnown RBP13.06□□□□□ -0.32
NEDD1-202ENST00000411739 CBWD1Q9BRT8 395 aa13.06□□□□□ -0.32
NEDD1-202ENST00000411739 TMEM175Q9BSA9 504 aa13.06□□□□□ -0.32
NEDD1-202ENST00000411739 NSUN3Q9H649 340 aaKnown RBP13.06□□□□□ -0.32
NEDD1-202ENST00000411739 AGO2Q9UKV8 859 aaKnown RBP13.06□□□□□ -0.32
NEDD1-202ENST00000411739 LACTBL1A8MY62 500 aa13.06□□□□□ -0.32
NEDD1-202ENST00000411739 C2CD2LO14523 706 aa13.06□□□□□ -0.32
NEDD1-202ENST00000411739 OGTO15294 1046 aa13.06□□□□□ -0.32
NEDD1-202ENST00000411739 LINC01565O15544 149 aa13.06□□□□□ -0.32
NEDD1-202ENST00000411739 NRIP1P48552 1158 aa13.06□□□□□ -0.32
NEDD1-202ENST00000411739 GUCY2FP51841 1108 aa13.06□□□□□ -0.32
NEDD1-202ENST00000411739 HYAL1Q12794 435 aa13.06□□□□□ -0.32
NEDD1-202ENST00000411739 TUSC3Q13454 348 aa13.06□□□□□ -0.32
NEDD1-202ENST00000411739 ENOX2Q16206 610 aaKnown RBP13.06□□□□□ -0.32
NEDD1-202ENST00000411739 ENGASEQ8NFI3 743 aa13.06□□□□□ -0.32
NEDD1-202ENST00000411739 SCFD1Q8WVM8 642 aa13.06□□□□□ -0.32
NEDD1-202ENST00000411739 FAM84AQ96KN4 292 aa13.06□□□□□ -0.32
NEDD1-202ENST00000411739 LMAN2LQ9H0V9 348 aa13.06□□□□□ -0.32
NEDD1-202ENST00000411739 TOPORSQ9NS56 1045 aaPredicted RBP13.06□□□□□ -0.32
NEDD1-202ENST00000411739 USP25Q9UHP3 1055 aa13.06□□□□□ -0.32
NEDD1-202ENST00000411739 PRPF40AO75400 957 aaKnown RBP13.05□□□□□ -0.32
NEDD1-202ENST00000411739 CXCL14O95715 111 aa13.05□□□□□ -0.32
NEDD1-202ENST00000411739 RPN1P04843 607 aaKnown RBP13.05□□□□□ -0.32
NEDD1-202ENST00000411739 CLTAP09496 248 aa13.05□□□□□ -0.32
NEDD1-202ENST00000411739 CLCNKBP51801 687 aa13.05□□□□□ -0.32
NEDD1-202ENST00000411739 FAM213AQ9BRX8 229 aa13.05□□□□□ -0.32
NEDD1-202ENST00000411739 GPR62Q9BZJ7 368 aa13.05□□□□□ -0.32
NEDD1-202ENST00000411739 EXOC1Q9NV70 894 aa13.05□□□□□ -0.32
NEDD1-202ENST00000411739 EXOC7Q9UPT5 735 aa13.05□□□□□ -0.32
NEDD1-202ENST00000411739 MAPK8IP1Q9UQF2 711 aa13.05□□□□□ -0.32
NEDD1-202ENST00000411739 ZMYM2Q9UBW7 1377 aa13.05□□□□□ -0.32
NEDD1-202ENST00000411739 PVALEFA0A1B0GWK0 134 aa13.05□□□□□ -0.32
NEDD1-202ENST00000411739 I3L4J1 428 aa13.05□□□□□ -0.32
NEDD1-202ENST00000411739 CLIC2O15247 247 aa13.05□□□□□ -0.32
NEDD1-202ENST00000411739 KIF4AO95239 1232 aa13.05□□□□□ -0.32
NEDD1-202ENST00000411739 DPYDQ12882 1025 aa13.05□□□□□ -0.32
NEDD1-202ENST00000411739 TIGD5Q53EQ6 642 aa13.05□□□□□ -0.32
NEDD1-202ENST00000411739 EPM2AIP1Q7L775 607 aaPredicted RBP13.05□□□□□ -0.32
NEDD1-202ENST00000411739 DDX53Q86TM3 631 aaKnown RBP13.05□□□□□ -0.32
NEDD1-202ENST00000411739 KIAA0895Q8NCT3 520 aa13.05□□□□□ -0.32
NEDD1-202ENST00000411739 HVCN1Q96D96 273 aa13.05□□□□□ -0.32
NEDD1-202ENST00000411739 COLEC11Q9BWP8 271 aa13.05□□□□□ -0.32
NEDD1-202ENST00000411739 RPF1Q9H9Y2 349 aaKnown RBP13.05□□□□□ -0.32
NEDD1-202ENST00000411739 BRWD1Q9NSI6 2320 aa13.05□□□□□ -0.32
NEDD1-202ENST00000411739 TUBGCP4Q9UGJ1 667 aa13.05□□□□□ -0.32
NEDD1-202ENST00000411739 CPSF3Q9UKF6 684 aaKnown RBP13.05□□□□□ -0.32
NEDD1-202ENST00000411739 A0A0C4DFX4 3053 aa13.05□□□□□ -0.32
NEDD1-202ENST00000411739 FSCN2O14926 492 aa13.04□□□□□ -0.32
NEDD1-202ENST00000411739 TADA2AO75478 443 aa13.04□□□□□ -0.32
NEDD1-202ENST00000411739 WNT7BP56706 349 aa13.04□□□□□ -0.32
NEDD1-202ENST00000411739 UBE3AQ05086 875 aa13.04□□□□□ -0.32
NEDD1-202ENST00000411739 FAM160A1Q05DH4 1040 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms