RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 SNW1Q13573 536 aaKnown RBP18.45■□□□□ 0.54
MRPL55-220ENST00000411464 AXDND1Q5T1B0 1012 aaPredicted RBP18.45■□□□□ 0.54
MRPL55-220ENST00000411464 CATSPER3Q86XQ3 398 aa18.45■□□□□ 0.54
MRPL55-220ENST00000411464 NOSTRINQ8IVI9 506 aa18.45■□□□□ 0.54
MRPL55-220ENST00000411464 KIAA2013Q8IYS2 634 aa18.45■□□□□ 0.54
MRPL55-220ENST00000411464 GVINP1Q7Z2Y8 2422 aa18.44■□□□□ 0.54
MRPL55-220ENST00000411464 C2orf16Q68DN1 1984 aa18.44■□□□□ 0.54
MRPL55-220ENST00000411464 KANSL1LA0AUZ9 987 aa18.44■□□□□ 0.54
MRPL55-220ENST00000411464 TTLL13PA6NNM8 815 aa18.44■□□□□ 0.54
MRPL55-220ENST00000411464 WNT7AO00755 349 aa18.44■□□□□ 0.54
MRPL55-220ENST00000411464 PRKCBP05771 671 aa18.44■□□□□ 0.54
MRPL55-220ENST00000411464 UVSSAQ2YD98 709 aa18.44■□□□□ 0.54
MRPL55-220ENST00000411464 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.44■□□□□ 0.54
MRPL55-220ENST00000411464 DEPTORQ8TB45 409 aa18.44■□□□□ 0.54
MRPL55-220ENST00000411464 SLC7A14Q8TBB6 771 aa18.44■□□□□ 0.54
MRPL55-220ENST00000411464 BCO2Q9BYV7 579 aa18.44■□□□□ 0.54
MRPL55-220ENST00000411464 DMDP11532 3685 aa18.44■□□□□ 0.54
MRPL55-220ENST00000411464 ACKR2O00590 384 aa18.43■□□□□ 0.54
MRPL55-220ENST00000411464 ADAM12O43184 909 aa18.43■□□□□ 0.54
MRPL55-220ENST00000411464 MED24O75448 989 aa18.43■□□□□ 0.54
MRPL55-220ENST00000411464 GLULP15104 373 aa18.43■□□□□ 0.54
MRPL55-220ENST00000411464 MCM7P33993 719 aa18.43■□□□□ 0.54
MRPL55-220ENST00000411464 OR1D2P34982 312 aa18.43■□□□□ 0.54
MRPL55-220ENST00000411464 FOSBP53539 338 aa18.43■□□□□ 0.54
MRPL55-220ENST00000411464 ANAPC15P60006 121 aa18.43■□□□□ 0.54
MRPL55-220ENST00000411464 PFKPQ01813 784 aa18.43■□□□□ 0.54
MRPL55-220ENST00000411464 PRKCQQ04759 706 aa18.43■□□□□ 0.54
MRPL55-220ENST00000411464 RAB33AQ14088 237 aa18.43■□□□□ 0.54
MRPL55-220ENST00000411464 SLC44A4Q53GD3 710 aa18.43■□□□□ 0.54
MRPL55-220ENST00000411464 PADI6Q6TGC4 694 aa18.43■□□□□ 0.54
MRPL55-220ENST00000411464 ERMNQ8TAM6 284 aa18.43■□□□□ 0.54
MRPL55-220ENST00000411464 RUBCNQ92622 972 aa18.43■□□□□ 0.54
MRPL55-220ENST00000411464 GTF3C6Q969F1 213 aa18.43■□□□□ 0.54
MRPL55-220ENST00000411464 RMDN1Q96DB5 314 aa18.43■□□□□ 0.54
MRPL55-220ENST00000411464 TMEM60Q9H2L4 133 aa18.43■□□□□ 0.54
MRPL55-220ENST00000411464 SPATA6Q9NWH7 488 aaPredicted RBP18.43■□□□□ 0.54
MRPL55-220ENST00000411464 DAXXQ9UER7 740 aaPredicted RBP18.43■□□□□ 0.54
MRPL55-220ENST00000411464 KCNH3Q9ULD8 1083 aa18.43■□□□□ 0.54
MRPL55-220ENST00000411464 GDAQ9Y2T3 454 aa18.43■□□□□ 0.54
MRPL55-220ENST00000411464 ARHGEF35A5YM69 484 aa18.42■□□□□ 0.54
MRPL55-220ENST00000411464 LRRN2O75325 713 aa18.42■□□□□ 0.54
MRPL55-220ENST00000411464 B3GAT3O94766 335 aa18.42■□□□□ 0.54
MRPL55-220ENST00000411464 CYP11B2P19099 503 aa18.42■□□□□ 0.54
MRPL55-220ENST00000411464 NAMPTP43490 491 aa18.42■□□□□ 0.54
MRPL55-220ENST00000411464 PPP2R5AQ15172 486 aa18.42■□□□□ 0.54
MRPL55-220ENST00000411464 NAB2Q15742 525 aa18.42■□□□□ 0.54
MRPL55-220ENST00000411464 MLF2Q15773 248 aaPredicted RBP18.42■□□□□ 0.54
MRPL55-220ENST00000411464 ME3Q16798 604 aa18.42■□□□□ 0.54
MRPL55-220ENST00000411464 PABPC1LQ4VXU2 614 aaKnown RBP18.42■□□□□ 0.54
MRPL55-220ENST00000411464 RTL10Q7L3V2 364 aa18.42■□□□□ 0.54
MRPL55-220ENST00000411464 ITFG1Q8TB96 612 aa18.42■□□□□ 0.54
MRPL55-220ENST00000411464 BSNDQ8WZ55 320 aa18.42■□□□□ 0.54
MRPL55-220ENST00000411464 POLR3CQ9BUI4 534 aaPredicted RBP18.42■□□□□ 0.54
MRPL55-220ENST00000411464 CXCL16Q9H2A7 254 aa18.42■□□□□ 0.54
MRPL55-220ENST00000411464 USP20Q9Y2K6 914 aa18.42■□□□□ 0.54
MRPL55-220ENST00000411464 FAM170BA6NMN3 283 aa18.41■□□□□ 0.54
MRPL55-220ENST00000411464 LAMTOR5O43504 91 aa18.41■□□□□ 0.54
MRPL55-220ENST00000411464 TRAPPC3O43617 180 aa18.41■□□□□ 0.54
MRPL55-220ENST00000411464 KINO60870 393 aaKnown RBP18.41■□□□□ 0.54
MRPL55-220ENST00000411464 POU2F2P09086 479 aa18.41■□□□□ 0.54
MRPL55-220ENST00000411464 FGFR3P22607 806 aa18.41■□□□□ 0.54
MRPL55-220ENST00000411464 EFNA5P52803 228 aa18.41■□□□□ 0.54
MRPL55-220ENST00000411464 UBXN2BQ14CS0 331 aa18.41■□□□□ 0.54
MRPL55-220ENST00000411464 SAFBQ15424 915 aaKnown RBP eCLIP18.41■□□□□ 0.54
MRPL55-220ENST00000411464 DCAF4L1Q3SXM0 396 aa18.41■□□□□ 0.54
MRPL55-220ENST00000411464 DGLUCYQ7Z3D6 616 aa18.41■□□□□ 0.54
MRPL55-220ENST00000411464 APBB1IPQ7Z5R6 666 aaPredicted RBP18.41■□□□□ 0.54
MRPL55-220ENST00000411464 NSUN7Q8NE18 718 aaKnown RBP18.41■□□□□ 0.54
MRPL55-220ENST00000411464 BORCS6Q96GS4 357 aa18.41■□□□□ 0.54
MRPL55-220ENST00000411464 IFT74Q96LB3 600 aa18.41■□□□□ 0.54
MRPL55-220ENST00000411464 KXD1Q9BQD3 176 aa18.41■□□□□ 0.54
MRPL55-220ENST00000411464 DNMT3BQ9UBC3 853 aaKnown RBP18.41■□□□□ 0.54
MRPL55-220ENST00000411464 MRPS23Q9Y3D9 190 aaKnown RBP18.41■□□□□ 0.54
MRPL55-220ENST00000411464 DCHS1Q96JQ0 3298 aa18.4■□□□□ 0.54
MRPL55-220ENST00000411464 EP300Q09472 2414 aaPredicted RBP18.4■□□□□ 0.54
MRPL55-220ENST00000411464 RPA1P27694 616 aa18.4■□□□□ 0.54
MRPL55-220ENST00000411464 RBM25P49756 843 aaKnown RBP18.4■□□□□ 0.54
MRPL55-220ENST00000411464 EEF1DP3Q658K8 133 aa18.4■□□□□ 0.54
MRPL55-220ENST00000411464 RSPO2Q6UXX9 243 aaPredicted RBP18.4■□□□□ 0.54
MRPL55-220ENST00000411464 ANKS3Q6ZW76 656 aa18.4■□□□□ 0.54
MRPL55-220ENST00000411464 NPAS3Q8IXF0 933 aa18.4■□□□□ 0.54
MRPL55-220ENST00000411464 UROC1Q96N76 676 aa18.4■□□□□ 0.54
MRPL55-220ENST00000411464 DDX23Q9BUQ8 820 aaKnown RBP18.4■□□□□ 0.54
MRPL55-220ENST00000411464 OSBPL6Q9BZF3 934 aa18.4■□□□□ 0.54
MRPL55-220ENST00000411464 CCDC113Q9H0I3 377 aa18.4■□□□□ 0.54
MRPL55-220ENST00000411464 HCFC1R1Q9NWW0 138 aa18.4■□□□□ 0.54
MRPL55-220ENST00000411464 MTRRQ9UBK8 725 aa18.4■□□□□ 0.54
MRPL55-220ENST00000411464 CDY1Q9Y6F8 540 aa18.4■□□□□ 0.54
MRPL55-220ENST00000411464 FRYLO94915 3013 aa18.4■□□□□ 0.54
MRPL55-220ENST00000411464 ZNF292O60281 2723 aa18.4■□□□□ 0.54
MRPL55-220ENST00000411464 TMEM189-UBE2V1I3L0A0 370 aa18.39■□□□□ 0.53
MRPL55-220ENST00000411464 JAK2O60674 1132 aa18.39■□□□□ 0.53
MRPL55-220ENST00000411464 LARGE1O95461 756 aa18.39■□□□□ 0.53
MRPL55-220ENST00000411464 CLCNKBP51801 687 aa18.39■□□□□ 0.53
MRPL55-220ENST00000411464 ZNF528Q3MIS6 628 aa18.39■□□□□ 0.53
MRPL55-220ENST00000411464 GLRA4Q5JXX5 417 aa18.39■□□□□ 0.53
MRPL55-220ENST00000411464 ZBTB41Q5SVQ8 909 aa18.39■□□□□ 0.53
MRPL55-220ENST00000411464 ATF7IP2Q5U623 682 aa18.39■□□□□ 0.53
MRPL55-220ENST00000411464 MAML2Q8IZL2 1156 aaPredicted RBP18.39■□□□□ 0.53
MRPL55-220ENST00000411464 DCLK2Q8N568 766 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms