RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 CHRNB2P17787 502 aa22.29■■□□□ 1.16
USP39-203ENST00000409470 TFDP1Q14186 410 aa22.29■■□□□ 1.16
USP39-203ENST00000409470 SEZ6Q53EL9 994 aa22.29■■□□□ 1.16
USP39-203ENST00000409470 SPRYD7Q5W111 196 aa22.29■■□□□ 1.16
USP39-203ENST00000409470 DPP9Q86TI2 863 aa22.29■■□□□ 1.16
USP39-203ENST00000409470 NLRP4Q96MN2 994 aa22.29■■□□□ 1.16
USP39-203ENST00000409470 PARK7Q99497 189 aaKnown RBP22.29■■□□□ 1.16
USP39-203ENST00000409470 CGRRF1Q99675 332 aa22.29■■□□□ 1.16
USP39-203ENST00000409470 ISCUQ9H1K1 167 aa22.29■■□□□ 1.16
USP39-203ENST00000409470 RRAGCQ9HB90 399 aa22.29■■□□□ 1.16
USP39-203ENST00000409470 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.29■■□□□ 1.16
USP39-203ENST00000409470 RTN2O75298 545 aa22.28■■□□□ 1.16
USP39-203ENST00000409470 EFCAB12Q6NXP0 572 aa22.28■■□□□ 1.16
USP39-203ENST00000409470 PBKQ96KB5 322 aa22.28■■□□□ 1.16
USP39-203ENST00000409470 PCDHB18PQ96TA0 734 aa22.28■■□□□ 1.16
USP39-203ENST00000409470 FUT8Q9BYC5 575 aa22.28■■□□□ 1.16
USP39-203ENST00000409470 RNPEPQ9H4A4 650 aa22.28■■□□□ 1.16
USP39-203ENST00000409470 CES2O00748 559 aa22.28■■□□□ 1.16
USP39-203ENST00000409470 SASH3O75995 380 aa22.28■■□□□ 1.16
USP39-203ENST00000409470 CLSTN1O94985 981 aa22.28■■□□□ 1.16
USP39-203ENST00000409470 MMEP08473 750 aa22.28■■□□□ 1.16
USP39-203ENST00000409470 IGBP1P78318 339 aa22.28■■□□□ 1.16
USP39-203ENST00000409470 GPR142Q7Z601 462 aa22.28■■□□□ 1.16
USP39-203ENST00000409470 ZNF467Q7Z7K2 595 aaPredicted RBP22.28■■□□□ 1.16
USP39-203ENST00000409470 ACO2Q99798 780 aaKnown RBP22.28■■□□□ 1.16
USP39-203ENST00000409470 RBM12Q9NTZ6 932 aaKnown RBP22.28■■□□□ 1.16
USP39-203ENST00000409470 AMFRQ9UKV5 643 aa22.28■■□□□ 1.16
USP39-203ENST00000409470 BUB1BO60566 1050 aaPredicted RBP22.27■■□□□ 1.16
USP39-203ENST00000409470 LGALS2P05162 132 aa22.27■■□□□ 1.16
USP39-203ENST00000409470 ZBTB48P10074 688 aaPredicted RBP22.27■■□□□ 1.16
USP39-203ENST00000409470 CLCN3P51790 818 aa22.27■■□□□ 1.16
USP39-203ENST00000409470 RNASE9P60153 205 aaKnown RBP22.27■■□□□ 1.16
USP39-203ENST00000409470 RHOT2Q8IXI1 618 aa22.27■■□□□ 1.16
USP39-203ENST00000409470 ZNF668Q96K58 619 aaPredicted RBP22.27■■□□□ 1.16
USP39-203ENST00000409470 LRRC1Q9BTT6 524 aa22.27■■□□□ 1.16
USP39-203ENST00000409470 SELENOOQ9BVL4 669 aa22.27■■□□□ 1.16
USP39-203ENST00000409470 CNTNAP2Q9UHC6 1331 aa22.27■■□□□ 1.15
USP39-203ENST00000409470 PHACTR2O75167 634 aa22.26■■□□□ 1.15
USP39-203ENST00000409470 ZMYND10O75800 440 aa22.26■■□□□ 1.15
USP39-203ENST00000409470 GJB1P08034 283 aa22.26■■□□□ 1.15
USP39-203ENST00000409470 GZMAP12544 262 aa22.26■■□□□ 1.15
USP39-203ENST00000409470 ADCYAP1R1P41586 468 aa22.26■■□□□ 1.15
USP39-203ENST00000409470 GPC5P78333 572 aa22.26■■□□□ 1.15
USP39-203ENST00000409470 FMO1Q01740 532 aa22.26■■□□□ 1.15
USP39-203ENST00000409470 CDR2Q01850 454 aa22.26■■□□□ 1.15
USP39-203ENST00000409470 NT5DC3Q86UY8 548 aa22.26■■□□□ 1.15
USP39-203ENST00000409470 ZBTB10Q96DT7 871 aa22.26■■□□□ 1.15
USP39-203ENST00000409470 STXBP5LQ9Y2K9 1186 aa22.26■■□□□ 1.15
USP39-203ENST00000409470 VNN1O95497 513 aa22.26■■□□□ 1.15
USP39-203ENST00000409470 TMEM132AQ24JP5 1023 aa22.26■■□□□ 1.15
USP39-203ENST00000409470 ZNF484Q5JVG2 852 aa22.26■■□□□ 1.15
USP39-203ENST00000409470 HDXQ7Z353 690 aa22.26■■□□□ 1.15
USP39-203ENST00000409470 PPTC7Q8NI37 304 aa22.26■■□□□ 1.15
USP39-203ENST00000409470 AFG1LQ8WV93 481 aa22.26■■□□□ 1.15
USP39-203ENST00000409470 CTTNBP2NLQ9P2B4 639 aa22.26■■□□□ 1.15
USP39-203ENST00000409470 RBM47A0AV96 593 aaKnown RBP22.25■■□□□ 1.15
USP39-203ENST00000409470 INO80B-WBP1J3KQ70 363 aa22.25■■□□□ 1.15
USP39-203ENST00000409470 CEP104O60308 925 aa22.25■■□□□ 1.15
USP39-203ENST00000409470 INSRRP14616 1297 aa22.25■■□□□ 1.15
USP39-203ENST00000409470 TNFSF9P41273 254 aa22.25■■□□□ 1.15
USP39-203ENST00000409470 MAP9Q49MG5 647 aa22.25■■□□□ 1.15
USP39-203ENST00000409470 SPOPLQ6IQ16 392 aa22.25■■□□□ 1.15
USP39-203ENST00000409470 MAMDC4Q6UXC1 1216 aa22.25■■□□□ 1.15
USP39-203ENST00000409470 BRSK2Q8IWQ3 736 aa22.25■■□□□ 1.15
USP39-203ENST00000409470 PTPN18Q99952 460 aa22.25■■□□□ 1.15
USP39-203ENST00000409470 INO80BQ9C086 356 aaPredicted RBP22.25■■□□□ 1.15
USP39-203ENST00000409470 L1RE1Q9UN81 338 aa22.25■■□□□ 1.15
USP39-203ENST00000409470 OGTO15294 1046 aa22.24■■□□□ 1.15
USP39-203ENST00000409470 ASAP2O43150 1006 aa22.24■■□□□ 1.15
USP39-203ENST00000409470 SNAI1O95863 264 aaPredicted RBP22.24■■□□□ 1.15
USP39-203ENST00000409470 PLA2G4AP47712 749 aa22.24■■□□□ 1.15
USP39-203ENST00000409470 GRB14Q14449 540 aa22.24■■□□□ 1.15
USP39-203ENST00000409470 C8orf74Q6P047 294 aa22.24■■□□□ 1.15
USP39-203ENST00000409470 PLEKHH3Q7Z736 793 aa22.24■■□□□ 1.15
USP39-203ENST00000409470 OR5B17Q8NGF7 314 aa22.24■■□□□ 1.15
USP39-203ENST00000409470 FAM212AQ96EL1 285 aa22.24■■□□□ 1.15
USP39-203ENST00000409470 COG5Q9UP83 839 aa22.24■■□□□ 1.15
USP39-203ENST00000409470 C22orf31O95567 290 aa22.24■■□□□ 1.15
USP39-203ENST00000409470 MCL1Q07820 350 aa22.24■■□□□ 1.15
USP39-203ENST00000409470 FAM110CQ1W6H9 321 aa22.24■■□□□ 1.15
USP39-203ENST00000409470 USP38Q8NB14 1042 aa22.24■■□□□ 1.15
USP39-203ENST00000409470 KATNBL1Q9H079 304 aa22.24■■□□□ 1.15
USP39-203ENST00000409470 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.23■■□□□ 1.15
USP39-203ENST00000409470 ACKR2O00590 384 aa22.23■■□□□ 1.15
USP39-203ENST00000409470 ZNF286BP0CG31 522 aa22.23■■□□□ 1.15
USP39-203ENST00000409470 MRPS25P82663 173 aaKnown RBP22.23■■□□□ 1.15
USP39-203ENST00000409470 HDAC7Q8WUI4 952 aa22.23■■□□□ 1.15
USP39-203ENST00000409470 DDX1Q92499 740 aaKnown RBP22.23■■□□□ 1.15
USP39-203ENST00000409470 EMID1Q96A84 441 aaPredicted RBP22.23■■□□□ 1.15
USP39-203ENST00000409470 HES6Q96HZ4 224 aa22.23■■□□□ 1.15
USP39-203ENST00000409470 MAML3Q96JK9 1138 aa22.23■■□□□ 1.15
USP39-203ENST00000409470 CALR3Q96L12 384 aaKnown RBP22.23■■□□□ 1.15
USP39-203ENST00000409470 FAM189A1O60320 539 aa22.23■■□□□ 1.15
USP39-203ENST00000409470 AP3M2P53677 418 aa22.23■■□□□ 1.15
USP39-203ENST00000409470 PTENP60484 403 aa22.23■■□□□ 1.15
USP39-203ENST00000409470 SLC7A5Q01650 507 aa22.23■■□□□ 1.15
USP39-203ENST00000409470 ATF7IP2Q5U623 682 aa22.23■■□□□ 1.15
USP39-203ENST00000409470 MPZL3Q6UWV2 235 aa22.23■■□□□ 1.15
USP39-203ENST00000409470 TSHZ1Q6ZSZ6 1077 aa22.23■■□□□ 1.15
USP39-203ENST00000409470 WDR49Q8IV35 697 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms