RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 SLC10A6Q3KNW5 377 aa18.25■□□□□ 0.51
SSB-202ENST00000409333 SMG8Q8ND04 991 aaKnown RBP18.25■□□□□ 0.51
SSB-202ENST00000409333 PCMTD1Q96MG8 357 aaPredicted RBP18.25■□□□□ 0.51
SSB-202ENST00000409333 ACAP3Q96P50 834 aa18.25■□□□□ 0.51
SSB-202ENST00000409333 APOL6Q9BWW8 343 aa18.25■□□□□ 0.51
SSB-202ENST00000409333 IFIH1Q9BYX4 1025 aaKnown RBP18.25■□□□□ 0.51
SSB-202ENST00000409333 GCNT4Q9P109 453 aa18.25■□□□□ 0.51
SSB-202ENST00000409333 TBX21Q9UL17 535 aa18.25■□□□□ 0.51
SSB-202ENST00000409333 IPPQ9Y573 584 aa18.25■□□□□ 0.51
SSB-202ENST00000409333 NBNO60934 754 aa18.24■□□□□ 0.51
SSB-202ENST00000409333 APBA1Q02410 837 aa18.24■□□□□ 0.51
SSB-202ENST00000409333 TBX2Q13207 712 aaPredicted RBP18.24■□□□□ 0.51
SSB-202ENST00000409333 DSC3Q14574 896 aa18.24■□□□□ 0.51
SSB-202ENST00000409333 EFCAB13Q8IY85 973 aa18.24■□□□□ 0.51
SSB-202ENST00000409333 SCLYQ96I15 445 aa18.24■□□□□ 0.51
SSB-202ENST00000409333 CCDC94Q9BW85 323 aaPredicted RBP18.24■□□□□ 0.51
SSB-202ENST00000409333 WNT8AQ9H1J5 351 aa18.24■□□□□ 0.51
SSB-202ENST00000409333 CXCL16Q9H2A7 254 aa18.24■□□□□ 0.51
SSB-202ENST00000409333 TMEM8AQ9HCN3 771 aa18.24■□□□□ 0.51
SSB-202ENST00000409333 GTPBP10A4D1E9 387 aaKnown RBP18.23■□□□□ 0.51
SSB-202ENST00000409333 LACTBL1A8MY62 500 aa18.23■□□□□ 0.51
SSB-202ENST00000409333 STX10O60499 249 aa18.23■□□□□ 0.51
SSB-202ENST00000409333 N4BP1O75113 896 aaKnown RBP18.23■□□□□ 0.51
SSB-202ENST00000409333 CLTBP09497 229 aa18.23■□□□□ 0.51
SSB-202ENST00000409333 ZSCAN20P17040 1043 aaPredicted RBP18.23■□□□□ 0.51
SSB-202ENST00000409333 SLC9A1P19634 815 aa18.23■□□□□ 0.51
SSB-202ENST00000409333 AKAP5P24588 427 aa18.23■□□□□ 0.51
SSB-202ENST00000409333 CYP2C18P33260 490 aa18.23■□□□□ 0.51
SSB-202ENST00000409333 GOLGA8FQ08AF8 430 aa18.23■□□□□ 0.51
SSB-202ENST00000409333 GOLGA8DPQ0D2H9 430 aa18.23■□□□□ 0.51
SSB-202ENST00000409333 EXOC3L4Q17RC7 722 aa18.23■□□□□ 0.51
SSB-202ENST00000409333 GBP6Q6ZN66 633 aa18.23■□□□□ 0.51
SSB-202ENST00000409333 UBE2Q1Q7Z7E8 422 aa18.23■□□□□ 0.51
SSB-202ENST00000409333 OR5B17Q8NGF7 314 aa18.23■□□□□ 0.51
SSB-202ENST00000409333 LSM14BQ9BX40 385 aaKnown RBP18.23■□□□□ 0.51
SSB-202ENST00000409333 RNF39Q9H2S5 420 aa18.23■□□□□ 0.51
SSB-202ENST00000409333 FAM207AQ9NSI2 230 aaPredicted RBP18.23■□□□□ 0.51
SSB-202ENST00000409333 FAM105AQ9NUU6 356 aa18.23■□□□□ 0.51
SSB-202ENST00000409333 IMPACTQ9P2X3 320 aa18.23■□□□□ 0.51
SSB-202ENST00000409333 PCDHB2Q9Y5E7 798 aa18.23■□□□□ 0.51
SSB-202ENST00000409333 TTC26A0AVF1 554 aa18.22■□□□□ 0.51
SSB-202ENST00000409333 EPHB6O15197 1021 aa18.22■□□□□ 0.51
SSB-202ENST00000409333 LRRN2O75325 713 aa18.22■□□□□ 0.51
SSB-202ENST00000409333 RECQL4O94761 1208 aa18.22■□□□□ 0.51
SSB-202ENST00000409333 IL18RAPO95256 599 aa18.22■□□□□ 0.51
SSB-202ENST00000409333 GYPCP04921 128 aa18.22■□□□□ 0.51
SSB-202ENST00000409333 PON1P27169 355 aa18.22■□□□□ 0.51
SSB-202ENST00000409333 GTF2H1P32780 548 aa18.22■□□□□ 0.51
SSB-202ENST00000409333 CCL23P55773 120 aa18.22■□□□□ 0.51
SSB-202ENST00000409333 POU5F1Q01860 360 aaKnown RBP18.22■□□□□ 0.51
SSB-202ENST00000409333 SURF1Q15526 300 aa18.22■□□□□ 0.51
SSB-202ENST00000409333 KRT39Q6A163 491 aa18.22■□□□□ 0.51
SSB-202ENST00000409333 C15orf39Q6ZRI6 1047 aa18.22■□□□□ 0.51
SSB-202ENST00000409333 SV2AQ7L0J3 742 aa18.22■□□□□ 0.51
SSB-202ENST00000409333 CCDC186Q7Z3E2 898 aa18.22■□□□□ 0.51
SSB-202ENST00000409333 WDR49Q8IV35 697 aa18.22■□□□□ 0.51
SSB-202ENST00000409333 CPLX3Q8WVH0 158 aa18.22■□□□□ 0.51
SSB-202ENST00000409333 ADAM2Q99965 735 aa18.22■□□□□ 0.51
SSB-202ENST00000409333 TMEM39AQ9NV64 488 aa18.22■□□□□ 0.51
SSB-202ENST00000409333 SCN1AP35498 2009 aa18.22■□□□□ 0.51
SSB-202ENST00000409333 LTBP2Q14767 1821 aa18.22■□□□□ 0.51
SSB-202ENST00000409333 C4BPAP04003 597 aaKnown RBP18.22■□□□□ 0.51
SSB-202ENST00000409333 PTMAP06454 111 aaKnown RBP18.22■□□□□ 0.51
SSB-202ENST00000409333 NFICP08651 508 aa18.22■□□□□ 0.51
SSB-202ENST00000409333 ACTN1P12814 892 aa18.22■□□□□ 0.51
SSB-202ENST00000409333 ARID5BQ14865 1188 aa18.22■□□□□ 0.51
SSB-202ENST00000409333 EPC2Q52LR7 807 aa18.22■□□□□ 0.51
SSB-202ENST00000409333 TDRD10Q5VZ19 366 aaKnown RBP18.22■□□□□ 0.51
SSB-202ENST00000409333 DPY19L2P1Q6NXN4 242 aa18.22■□□□□ 0.51
SSB-202ENST00000409333 TTYH3Q9C0H2 523 aa18.22■□□□□ 0.51
SSB-202ENST00000409333 MTMR12Q9C0I1 747 aa18.22■□□□□ 0.51
SSB-202ENST00000409333 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.22■□□□□ 0.513e-8■■□□□ 13.2
SSB-202ENST00000409333 MEIS3P2A8K0S8 358 aa18.21■□□□□ 0.51
SSB-202ENST00000409333 RNF225M0QZC1 329 aaPredicted RBP18.21■□□□□ 0.51
SSB-202ENST00000409333 PMM2O15305 246 aa18.21■□□□□ 0.51
SSB-202ENST00000409333 P4HA2O15460 535 aa18.21■□□□□ 0.51
SSB-202ENST00000409333 TRIM21P19474 475 aaKnown RBP18.21■□□□□ 0.51
SSB-202ENST00000409333 CASP14P31944 242 aa18.21■□□□□ 0.51
SSB-202ENST00000409333 ZACNQ401N2 412 aa18.21■□□□□ 0.51
SSB-202ENST00000409333 JADE1Q6IE81 842 aa18.21■□□□□ 0.51
SSB-202ENST00000409333 TRIM65Q6PJ69 517 aa18.21■□□□□ 0.51
SSB-202ENST00000409333 TMEM130Q8N3G9 435 aa18.21■□□□□ 0.51
SSB-202ENST00000409333 LMO3Q8TAP4 145 aa18.21■□□□□ 0.51
SSB-202ENST00000409333 TAS1R2Q8TE23 839 aa18.21■□□□□ 0.51
SSB-202ENST00000409333 LINC01599Q8WXQ3 324 aa18.21■□□□□ 0.51
SSB-202ENST00000409333 SEMA4DQ92854 862 aa18.21■□□□□ 0.51
SSB-202ENST00000409333 SNX27Q96L92 541 aa18.21■□□□□ 0.51
SSB-202ENST00000409333 GOLGA6L6A8MZA4 724 aa18.2■□□□□ 0.5
SSB-202ENST00000409333 NOL4O94818 638 aa18.2■□□□□ 0.5
SSB-202ENST00000409333 FXR1P51114 621 aaKnown RBP eCLIP18.2■□□□□ 0.5
SSB-202ENST00000409333 YARSP54577 528 aaKnown RBP18.2■□□□□ 0.5
SSB-202ENST00000409333 TFAMQ00059 246 aaKnown RBP18.2■□□□□ 0.5
SSB-202ENST00000409333 PLEKHG4Q58EX7 1191 aa18.2■□□□□ 0.5
SSB-202ENST00000409333 SCARA3Q6AZY7 606 aa18.2■□□□□ 0.5
SSB-202ENST00000409333 NEK11Q8NG66 645 aa18.2■□□□□ 0.5
SSB-202ENST00000409333 INTS2Q9H0H0 1204 aaKnown RBP18.2■□□□□ 0.5
SSB-202ENST00000409333 ASB7Q9H672 318 aa18.2■□□□□ 0.5
SSB-202ENST00000409333 SIX2Q9NPC8 291 aa18.2■□□□□ 0.5
SSB-202ENST00000409333 KLK14Q9P0G3 267 aa18.2■□□□□ 0.5
SSB-202ENST00000409333 PARP2Q9UGN5 583 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms