RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 PRRC2BQ5JSZ5 2229 aaKnown RBP22.13■■□□□ 1.13
PTCD3-202ENST00000409326 GOLGA6L22H0YM25 854 aa22.13■■□□□ 1.13
PTCD3-202ENST00000409326 MEFVO15553 781 aaPredicted RBP22.13■■□□□ 1.13
PTCD3-202ENST00000409326 ITGB1P05556 798 aa22.13■■□□□ 1.13
PTCD3-202ENST00000409326 THP07101 528 aa22.13■■□□□ 1.13
PTCD3-202ENST00000409326 GALTP07902 379 aa22.13■■□□□ 1.13
PTCD3-202ENST00000409326 CXCL8P10145 99 aa22.13■■□□□ 1.13
PTCD3-202ENST00000409326 ALDH7A1P49419 539 aaKnown RBP22.13■■□□□ 1.13
PTCD3-202ENST00000409326 ADGRE1Q14246 886 aa22.13■■□□□ 1.13
PTCD3-202ENST00000409326 SLC10A6Q3KNW5 377 aa22.13■■□□□ 1.13
PTCD3-202ENST00000409326 SLC39A11Q8N1S5 342 aa22.13■■□□□ 1.13
PTCD3-202ENST00000409326 SMARCE1Q969G3 411 aa22.13■■□□□ 1.13
PTCD3-202ENST00000409326 CPSF3Q9UKF6 684 aaKnown RBP22.13■■□□□ 1.13
PTCD3-202ENST00000409326 PCDHA5Q9Y5H7 936 aa22.13■■□□□ 1.13
PTCD3-202ENST00000409326 TGFB1I1O43294 461 aa22.12■■□□□ 1.13
PTCD3-202ENST00000409326 FGF18O76093 207 aa22.12■■□□□ 1.13
PTCD3-202ENST00000409326 KCNE1P15382 129 aa22.12■■□□□ 1.13
PTCD3-202ENST00000409326 SLC11A1P49279 550 aa22.12■■□□□ 1.13
PTCD3-202ENST00000409326 SNRPFP62306 86 aaKnown RBP22.12■■□□□ 1.13
PTCD3-202ENST00000409326 NAB2Q15742 525 aa22.12■■□□□ 1.13
PTCD3-202ENST00000409326 KNOP1Q1ED39 458 aaKnown RBP22.12■■□□□ 1.13
PTCD3-202ENST00000409326 GLRA4Q5JXX5 417 aa22.12■■□□□ 1.13
PTCD3-202ENST00000409326 ARMCX5Q6P1M9 558 aa22.12■■□□□ 1.13
PTCD3-202ENST00000409326 ERCC4Q92889 916 aaPredicted RBP22.12■■□□□ 1.13
PTCD3-202ENST00000409326 PPP1R10Q96QC0 940 aaKnown RBP22.12■■□□□ 1.13
PTCD3-202ENST00000409326 CBWD1Q9BRT8 395 aa22.12■■□□□ 1.13
PTCD3-202ENST00000409326 RPF1Q9H9Y2 349 aaKnown RBP22.12■■□□□ 1.13
PTCD3-202ENST00000409326 PLEKHA5Q9HAU0 1116 aa22.12■■□□□ 1.13
PTCD3-202ENST00000409326 SPG21Q9NZD8 308 aa22.12■■□□□ 1.13
PTCD3-202ENST00000409326 SMIM28A0A1B0GU29 152 aa22.11■■□□□ 1.13
PTCD3-202ENST00000409326 TTC26A0AVF1 554 aa22.11■■□□□ 1.13
PTCD3-202ENST00000409326 KIAA0391O15091 583 aaKnown RBP22.11■■□□□ 1.13
PTCD3-202ENST00000409326 GRM6O15303 877 aa22.11■■□□□ 1.13
PTCD3-202ENST00000409326 FOSL2P15408 326 aa22.11■■□□□ 1.13
PTCD3-202ENST00000409326 POU3F3P20264 500 aaPredicted RBP22.11■■□□□ 1.13
PTCD3-202ENST00000409326 ACOT2P49753 483 aa22.11■■□□□ 1.13
PTCD3-202ENST00000409326 POU5F1Q01860 360 aaKnown RBP22.11■■□□□ 1.13
PTCD3-202ENST00000409326 PLCB3Q01970 1234 aa22.11■■□□□ 1.13
PTCD3-202ENST00000409326 TUSC3Q13454 348 aa22.11■■□□□ 1.13
PTCD3-202ENST00000409326 ENOX2Q16206 610 aaKnown RBP22.11■■□□□ 1.13
PTCD3-202ENST00000409326 HS2ST1Q7LGA3 356 aa22.11■■□□□ 1.13
PTCD3-202ENST00000409326 LMAN2LQ9H0V9 348 aa22.11■■□□□ 1.13
PTCD3-202ENST00000409326 ALG13Q9NP73 1137 aaKnown RBP22.11■■□□□ 1.13
PTCD3-202ENST00000409326 AGPAT3Q9NRZ7 376 aa22.11■■□□□ 1.13
PTCD3-202ENST00000409326 CGNQ9P2M7 1197 aaKnown RBP22.11■■□□□ 1.13
PTCD3-202ENST00000409326 MYO7AQ13402 2215 aa22.11■■□□□ 1.13
PTCD3-202ENST00000409326 NT5C1B-RDH14C9J2C7 533 aa22.1■■□□□ 1.13
PTCD3-202ENST00000409326 KIF20AO95235 890 aa22.1■■□□□ 1.13
PTCD3-202ENST00000409326 LDHAP00338 332 aaKnown RBP22.1■■□□□ 1.13
PTCD3-202ENST00000409326 ALDH2P05091 517 aa22.1■■□□□ 1.13
PTCD3-202ENST00000409326 ADRB2P07550 413 aa22.1■■□□□ 1.13
PTCD3-202ENST00000409326 UBE3AQ05086 875 aa22.1■■□□□ 1.13
PTCD3-202ENST00000409326 PPP2R3AQ06190 1150 aa22.1■■□□□ 1.13
PTCD3-202ENST00000409326 CRELD2Q6UXH1 353 aaPredicted RBP22.1■■□□□ 1.13
PTCD3-202ENST00000409326 TMEM173Q86WV6 379 aaPredicted RBP22.1■■□□□ 1.13
PTCD3-202ENST00000409326 SPPL3Q8TCT6 385 aa22.1■■□□□ 1.13
PTCD3-202ENST00000409326 SAAL1Q96ER3 474 aa22.1■■□□□ 1.13
PTCD3-202ENST00000409326 ZMAT2Q96NC0 199 aaKnown RBP22.1■■□□□ 1.13
PTCD3-202ENST00000409326 LMCD1Q9NZU5 365 aa22.1■■□□□ 1.13
PTCD3-202ENST00000409326 FAN1Q9Y2M0 1017 aa22.1■■□□□ 1.13
PTCD3-202ENST00000409326 EYSQ5T1H1 3165 aa22.1■■□□□ 1.13
PTCD3-202ENST00000409326 NRP1O14786 923 aa22.09■■□□□ 1.13
PTCD3-202ENST00000409326 EXTL3O43909 919 aa22.09■■□□□ 1.13
PTCD3-202ENST00000409326 IGFBP4P22692 258 aa22.09■■□□□ 1.13
PTCD3-202ENST00000409326 OR1G1P47890 313 aa22.09■■□□□ 1.13
PTCD3-202ENST00000409326 PTPROQ16827 1216 aa22.09■■□□□ 1.13
PTCD3-202ENST00000409326 CD302Q8IX05 232 aa22.09■■□□□ 1.13
PTCD3-202ENST00000409326 C12orf56Q8IXR9 622 aa22.09■■□□□ 1.13
PTCD3-202ENST00000409326 GUF1Q8N442 669 aaKnown RBP22.09■■□□□ 1.13
PTCD3-202ENST00000409326 GOLGA5Q8TBA6 731 aa22.09■■□□□ 1.13
PTCD3-202ENST00000409326 POF1BQ8WVV4 589 aa22.09■■□□□ 1.13
PTCD3-202ENST00000409326 TMEM169Q96HH4 297 aa22.09■■□□□ 1.13
PTCD3-202ENST00000409326 IGSF21Q96ID5 467 aa22.09■■□□□ 1.13
PTCD3-202ENST00000409326 FAM213AQ9BRX8 229 aa22.09■■□□□ 1.13
PTCD3-202ENST00000409326 GTPBP4Q9BZE4 634 aaKnown RBP22.09■■□□□ 1.13
PTCD3-202ENST00000409326 KCTD10Q9H3F6 313 aa22.09■■□□□ 1.13
PTCD3-202ENST00000409326 PCIF1Q9H4Z3 704 aa22.09■■□□□ 1.13
PTCD3-202ENST00000409326 SLC38A7Q9NVC3 462 aa22.09■■□□□ 1.13
PTCD3-202ENST00000409326 LZTS1Q9Y250 596 aa22.09■■□□□ 1.13
PTCD3-202ENST00000409326 MTCH2Q9Y6C9 303 aa22.09■■□□□ 1.13
PTCD3-202ENST00000409326 LACTBL1A8MY62 500 aa22.08■■□□□ 1.13
PTCD3-202ENST00000409326 KRT17Q04695 432 aa22.08■■□□□ 1.13
PTCD3-202ENST00000409326 ZNF658Q5TYW1 1059 aaPredicted RBP22.08■■□□□ 1.13
PTCD3-202ENST00000409326 GPD1LQ8N335 351 aa22.08■■□□□ 1.13
PTCD3-202ENST00000409326 ZSWIM2Q8NEG5 633 aa22.08■■□□□ 1.13
PTCD3-202ENST00000409326 BCL7CQ8WUZ0 217 aaPredicted RBP22.08■■□□□ 1.13
PTCD3-202ENST00000409326 MRPL38Q96DV4 380 aaKnown RBP22.08■■□□□ 1.13
PTCD3-202ENST00000409326 TSPAN18Q96SJ8 248 aa22.08■■□□□ 1.13
PTCD3-202ENST00000409326 MARCH5Q9NX47 278 aa22.08■■□□□ 1.13
PTCD3-202ENST00000409326 HSPBP1Q9NZL4 362 aa22.08■■□□□ 1.13
PTCD3-202ENST00000409326 STXBP5LQ9Y2K9 1186 aa22.08■■□□□ 1.13
PTCD3-202ENST00000409326 PRG3Q9Y2Y8 225 aaPredicted RBP22.08■■□□□ 1.13
PTCD3-202ENST00000409326 CASTOR2A6NHX0 329 aa22.07■■□□□ 1.12
PTCD3-202ENST00000409326 CLIC2O15247 247 aa22.07■■□□□ 1.12
PTCD3-202ENST00000409326 DNAJB1P25685 340 aa22.07■■□□□ 1.12
PTCD3-202ENST00000409326 CAMK1Q14012 370 aa22.07■■□□□ 1.12
PTCD3-202ENST00000409326 COBLL1Q53SF7 1204 aa22.07■■□□□ 1.12
PTCD3-202ENST00000409326 BRSK2Q8IWQ3 736 aa22.07■■□□□ 1.12
PTCD3-202ENST00000409326 SMYD4Q8IYR2 804 aaPredicted RBP22.07■■□□□ 1.12
PTCD3-202ENST00000409326 CLSTN2Q9H4D0 955 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms